MGE detailed information
MGE type: Conjugative plasmid MGE length: 97209 bp
Accession: NZ_CP100709 Location: 1..97209 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: plasmid pR18.0409_97k
Accession: NZ_CP100709 Location: 1..97209 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: plasmid pR18.0409_97k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL735_RS25850 (700) | 700..1731 | - | 1032 | WP_000907866.1 | plasmid replication initiator RepA | - |
| NL735_RS25855 (2690) | 2690..2848 | + | 159 | Protein_2 | ash family protein | - |
| NL735_RS25860 (2886) | 2886..3173 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NL735_RS25865 (3615) | 3615..4148 | + | 534 | WP_254535111.1 | transcription termination/antitermination NusG family protein | - |
| NL735_RS25870 (4402) | 4402..5085 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NL735_RS25875 (5258) | 5258..5809 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| NL735_RS25880 (5971) | 5971..6225 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NL735_RS25885 (6401) | 6401..6697 | + | 297 | WP_000494779.1 | hypothetical protein | - |
| NL735_RS25890 (7321) | 7321..8388 | + | 1068 | WP_001302629.1 | hypothetical protein | VF |
| NL735_RS25895 (8388) | 8388..8825 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| NL735_RS25900 (8839) | 8839..10521 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NL735_RS25905 (10514) | 10514..11809 | + | 1296 | WP_000752772.1 | hypothetical protein | VF |
| NL735_RS25910 (11796) | 11796..12248 | + | 453 | WP_001247334.1 | hypothetical protein | VF |
| NL735_RS25915 (12259) | 12259..13812 | + | 1554 | WP_167651944.1 | hypothetical protein | VF |
| NL735_RS25920 (13825) | 13825..14922 | + | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NL735_RS25925 (14940) | 14940..15554 | + | 615 | WP_000959786.1 | hypothetical protein | VF |
| NL735_RS25930 (15564) | 15564..16124 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| NL735_RS25935 (16109) | 16109..16765 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| NL735_RS25940 (16765) | 16765..18057 | + | 1293 | WP_001417545.1 | hypothetical protein | VF |
| NL735_RS25945 (18054) | 18054..18302 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| NL735_RS25950 (19540) | 19540..19824 | - | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| NL735_RS25955 (19823) | 19823..20977 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| NL735_RS25960 (21128) | 21128..21952 | + | 825 | WP_001238929.1 | conjugal transfer protein TraE | - |
| NL735_RS25965 (22038) | 22038..23240 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| NL735_RS25970 (23300) | 23300..23884 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NL735_RS25975 (24279) | 24279..24737 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| NL735_RS25980 (24734) | 24734..25552 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| NL735_RS25985 (25549) | 25549..26697 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NL735_RS25990 (26694) | 26694..26984 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| NL735_RS25995 (26999) | 26999..27550 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| NL735_RS26000 (27640) | 27640..31407 | + | 3768 | WP_023518849.1 | DUF5710 domain-containing protein | - |
| NL735_RS26005 (31425) | 31425..31772 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NL735_RS26010 (31769) | 31769..32461 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NL735_RS26015 (32472) | 32472..33455 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| NL735_RS26020 (33458) | 33458..34747 | + | 1290 | WP_167651943.1 | conjugal transfer protein TraO | - |
| NL735_RS26025 (34747) | 34747..35451 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NL735_RS26030 (35451) | 35451..35978 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NL735_RS26035 (36029) | 36029..36433 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| NL735_RS26040 (36497) | 36497..36685 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NL735_RS26045 (36669) | 36669..37469 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NL735_RS26050 (37559) | 37559..40603 | + | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| NL735_RS26055 (40603) | 40603..41217 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NL735_RS26060 (41184) | 41184..42386 | + | 1203 | WP_254535113.1 | IncI1-type conjugal transfer protein TraW | - |
| NL735_RS26065 (42415) | 42415..42999 | + | 585 | WP_254535114.1 | IncI1-type conjugal transfer protein TraX | - |
| NL735_RS26070 (43096) | 43096..45264 | + | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| NL735_RS26075 (45335) | 45335..45997 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL735_RS26080 (46069) | 46069..46278 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NL735_RS26085 (46670) | 46670..46846 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| NL735_RS26090 (46911) | 46911..47207 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| NL735_RS26095 (47507) | 47507..47758 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| NL735_RS26100 (47830) | 47830..47982 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (48034) | 48034..48094 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48034) | 48034..48094 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48034) | 48034..48094 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48034) | 48034..48094 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| NL735_RS26105 (48303) | 48303..48677 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| NL735_RS26110 (48830) | 48830..50092 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NL735_RS26115 (50416) | 50416..51561 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| NL735_RS26120 (51655) | 51655..52188 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| NL735_RS26125 (52185) | 52185..52502 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NL735_RS26130 (52698) | 52698..53480 | + | 783 | WP_227496365.1 | protein FinQ | - |
| - (53550) | 53550..53607 | + | 58 | NuclAT_1 | - | - |
| - (53550) | 53550..53607 | + | 58 | NuclAT_1 | - | - |
| - (53550) | 53550..53607 | + | 58 | NuclAT_1 | - | - |
| - (53550) | 53550..53607 | + | 58 | NuclAT_1 | - | - |
| NL735_RS26135 (53787) | 53787..54995 | + | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| NL735_RS26140 (55014) | 55014..56084 | + | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| NL735_RS26145 (56077) | 56077..58368 | + | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| NL735_RS26150 (58406) | 58406..61105 | - | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| NL735_RS26155 (61116) | 61116..61448 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NL735_RS26160 (61682) | 61682..62017 | + | 336 | WP_021529212.1 | hypothetical protein | - |
| NL735_RS26165 (62104) | 62104..62952 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| NL735_RS26170 (63532) | 63532..63783 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NL735_RS26175 (63814) | 63814..64020 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| NL735_RS26180 (64082) | 64082..64984 | - | 903 | WP_011264057.1 | ISNCY family transposase ISRor2 | VF |
| NL735_RS26185 (64981) | 64981..65370 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| NL735_RS26190 (65547) | 65547..65813 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| NL735_RS26195 (65907) | 65907..66341 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| NL735_RS26200 (67070) | 67070..67570 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| NL735_RS26205 (68032) | 68032..68628 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| NL735_RS26210 (68625) | 68625..69344 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NL735_RS26215 (69341) | 69341..69775 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| NL735_RS26220 (69830) | 69830..71788 | - | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| NL735_RS26225 (71847) | 71847..72080 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NL735_RS26230 (72138) | 72138..72665 | - | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| NL735_RS26235 (73049) | 73049..73363 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| NL735_RS26240 (73434) | 73434..73625 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| NL735_RS26245 (73622) | 73622..74044 | - | 423 | WP_000271744.1 | DUF1380 family protein | - |
| NL735_RS26250 (74091) | 74091..74516 | - | 426 | WP_001579750.1 | antirestriction protein | - |
| NL735_RS26255 (74928) | 74928..75704 | - | 777 | WP_001005023.1 | hypothetical protein | - |
| NL735_RS26260 (75750) | 75750..76184 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| NL735_RS26265 (76198) | 76198..76419 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| NL735_RS26270 (76420) | 76420..77103 | - | 684 | WP_000086147.1 | DNA methylase | - |
| NL735_RS26275 (77180) | 77180..77491 | - | 312 | WP_032072582.1 | hypothetical protein | - |
| NL735_RS26280 (77488) | 77488..78390 | - | 903 | WP_072748701.1 | DUF1281 domain-containing protein | - |
| NL735_RS26285 (78808) | 78808..79056 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| NL735_RS26290 (79053) | 79053..79490 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL735_RS26295 (79490) | 79490..80761 | + | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| NL735_RS26300 (80766) | 80766..81158 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| NL735_RS26305 (81163) | 81163..82134 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| NL735_RS26310 (82363) | 82363..83007 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| NL735_RS26315 (83001) | 83001..83276 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| NL735_RS26320 (83414) | 83414..84196 | - | 783 | WP_001372173.1 | site-specific integrase | - |
| NL735_RS26325 (84264) | 84264..84872 | - | 609 | WP_000715519.1 | hypothetical protein | - |
| NL735_RS26330 (84942) | 84942..85292 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| NL735_RS26335 (85862) | 85862..86443 | + | 582 | WP_000139427.1 | hypothetical protein | - |
| NL735_RS26340 (86623) | 86623..86958 | + | 336 | WP_000628093.1 | hypothetical protein | - |
| NL735_RS26345 (86946) | 86946..87593 | + | 648 | WP_000074712.1 | hypothetical protein | - |
| NL735_RS26350 (87764) | 87764..88048 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| NL735_RS26355 (88068) | 88068..89201 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| NL735_RS26360 (89720) | 89720..90010 | - | 291 | WP_001229373.1 | hypothetical protein | - |
| NL735_RS26365 (90092) | 90092..90796 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NL735_RS26370 (90860) | 90860..91006 | - | 147 | Protein_105 | DUF4238 domain-containing protein | - |
| NL735_RS26375 (91036) | 91036..92139 | - | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| NL735_RS26380 (92468) | 92468..92725 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| NL735_RS26385 (92725) | 92725..93315 | + | 591 | WP_000194568.1 | hypothetical protein | - |
| NL735_RS26390 (93580) | 93580..95136 | + | 1557 | WP_001579759.1 | AAA family ATPase | - |
| NL735_RS26395 (95331) | 95331..95948 | + | 618 | WP_000521604.1 | ProQ/FINO family protein | - |
| NL735_RS26400 (96007) | 96007..96999 | - | 993 | WP_193628226.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|