MGE detailed information
MGE type: Genomic_island MGE length: 38136 bp
Accession: NZ_CP100693 Location: 3602739..3640874 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Accession: NZ_CP100693 Location: 3602739..3640874 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL712_RS17550 () | 3598041..3598808 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NL712_RS17555 () | 3599179..3599586 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NL712_RS17560 () | 3599917..3600636 | + | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| NL712_RS17565 () | 3600640..3600855 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NL712_RS17570 () | 3600975..3601922 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NL712_RS17575 () | 3602416..3602656 | - | 241 | Protein_3440 | PerC family transcriptional regulator | - |
| NL712_RS17580 () | 3602739..3603560 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| NL712_RS17585 () | 3603966..3604436 | - | 471 | WP_023255137.1 | AfaD family invasin | - |
| NL712_RS17590 () | 3604458..3606968 | - | 2511 | WP_023255136.1 | F1 capsule-anchoring protein | VF |
| NL712_RS17595 () | 3606992..3607729 | - | 738 | WP_058805822.1 | Chaperone protein caf1M | VF |
| NL712_RS17600 () | 3607813..3608307 | - | 495 | WP_187788956.1 | pilus assembly protein | - |
| NL712_RS17605 () | 3609072..3609773 | - | 702 | Protein_3446 | integrase core domain-containing protein | - |
| NL712_RS17610 () | 3609826..3610140 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| NL712_RS17615 () | 3610207..3610485 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| NL712_RS17620 () | 3610801..3611268 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| NL712_RS17625 () | 3612140..3612373 | - | 234 | WP_129374720.1 | hypothetical protein | - |
| - | 3612550..3612931 | - | 382 | - | - | Antitoxin Detail |
| NL712_RS17630 () | 3612707..3612982 | + | 276 | WP_058805824.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL712_RS17635 () | 3613027..3613344 | - | 318 | WP_129374721.1 | hypothetical protein | - |
| NL712_RS17640 () | 3613310..3614593 | - | 1284 | Protein_3453 | tRNA nuclease WapA | VF |
| NL712_RS17645 () | 3614730..3615194 | - | 465 | WP_223152163.1 | hypothetical protein | - |
| NL712_RS17650 () | 3615172..3618003 | - | 2832 | WP_058805826.1 | RHS repeat-associated core domain-containing protein | - |
| NL712_RS17655 () | 3618054..3618332 | + | 279 | Protein_3456 | type I toxin-antitoxin system SymE family toxin | - |
| NL712_RS17660 () | 3618491..3619357 | - | 867 | WP_049868168.1 | leucine-rich repeat domain-containing protein | - |
| NL712_RS17665 () | 3619348..3623448 | - | 4101 | WP_223195405.1 | RHS repeat-associated core domain-containing protein | - |
| NL712_RS17670 () | 3623467..3623914 | - | 448 | Protein_3459 | DcrB-related protein | - |
| NL712_RS17675 () | 3623938..3626127 | - | 2190 | WP_058805827.1 | hypothetical protein | VF |
| NL712_RS17680 () | 3626524..3627045 | - | 522 | WP_077946913.1 | DUF2778 domain-containing protein | - |
| NL712_RS17685 () | 3627069..3627485 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| NL712_RS17690 () | 3627482..3627577 | - | 96 | Protein_3463 | hypothetical protein | - |
| NL712_RS17695 () | 3627613..3628074 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| NL712_RS17700 () | 3628059..3628529 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| NL712_RS17705 () | 3628572..3629339 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| NL712_RS17710 () | 3629339..3633208 | - | 3870 | WP_058805828.1 | hypothetical protein | VF |
| NL712_RS17715 () | 3633242..3633673 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| NL712_RS17720 () | 3633875..3634648 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| NL712_RS17725 () | 3634653..3635957 | - | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NL712_RS17730 () | 3635954..3637297 | - | 1344 | WP_000118729.1 | hypothetical protein | VF |
| NL712_RS17735 () | 3637301..3637837 | - | 537 | WP_023255344.1 | hypothetical protein | VF |
| NL712_RS17740 () | 3637904..3638389 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NL712_RS17745 () | 3638532..3638915 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NL712_RS17750 () | 3638900..3639385 | - | 486 | WP_058805829.1 | type VI secretion system amidase effector protein Tae4 | - |
| NL712_RS17755 () | 3639428..3639621 | - | 194 | Protein_3476 | type VI secretion system lipoprotein TssJ | - |
| NL712_RS17760 () | 3639689..3640174 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| NL712_RS17765 () | 3640428..3640760 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| NL712_RS17770 () | 3640887..3640997 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| NL712_RS17775 () | 3641060..3642568 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NL712_RS17780 () | 3642592..3643134 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| NL712_RS17785 () | 3643234..3645873 | - | 2640 | WP_058805830.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|