MGE detailed information
MGE type: Prophage MGE length: 65957 bp
Accession: NZ_CP100685 Location: 1945289..2011245 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain R18.1297 Replicon: chromosome
Accession: NZ_CP100685 Location: 1945289..2011245 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain R18.1297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FC640_RS09210 () | 1941026..1941478 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| FC640_RS09215 () | 1941508..1942248 | + | 741 | WP_061380270.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| FC640_RS09220 () | 1942285..1942806 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FC640_RS09225 () | 1942808..1943407 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| FC640_RS09230 () | 1943617..1944309 | + | 693 | WP_058820964.1 | hypothetical protein | - |
| FC640_RS09235 () | 1944669..1945280 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| FC640_RS09240 () | 1945289..1946299 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| FC640_RS09245 () | 1946378..1947163 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| FC640_RS09250 () | 1947160..1947915 | - | 756 | WP_133322679.1 | hypothetical protein | VF |
| FC640_RS09255 () | 1947994..1948938 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| FC640_RS09260 () | 1948954..1950273 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| FC640_RS09265 () | 1950390..1951361 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| FC640_RS09270 () | 1951434..1952876 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| FC640_RS09275 () | 1953000..1953869 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| FC640_RS09280 () | 1954211..1955686 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| FC640_RS09285 () | 1955921..1957732 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| FC640_RS09290 () | 1957770..1958411 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FC640_RS09295 () | 1958511..1959689 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FC640_RS09300 () | 1959820..1960110 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| FC640_RS09305 () | 1960178..1960531 | + | 354 | WP_001042119.1 | protein YebF | - |
| FC640_RS09310 () | 1960625..1961284 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| FC640_RS09315 () | 1961497..1963548 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| FC640_RS09320 () | 1963585..1964283 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| FC640_RS09325 () | 1964307..1964963 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| FC640_RS09330 () | 1965071..1965301 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| FC640_RS09335 () | 1965439..1965813 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| FC640_RS09340 () | 1965814..1966689 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| FC640_RS09345 () | 1966706..1967059 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 1967161..1967304 | - | 144 | - | - | Antitoxin Detail |
| - | 1967199..1967302 | + | 104 | - | - | Toxin Detail |
| FC640_RS09350 () | 1967433..1968083 | - | 651 | Protein_1825 | hypothetical protein ; Integrase | Integrase |
| FC640_RS09355 () | 1968094..1968399 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| FC640_RS09360 () | 1968356..1968559 | + | 204 | Protein_1827 | phage tail protein | - |
| FC640_RS09365 () | 1968731..1968886 | + | 156 | Protein_1828 | DUF4376 domain-containing protein | - |
| FC640_RS09370 () | 1968992..1969324 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| FC640_RS09375 () | 1969373..1969482 | + | 110 | Protein_1830 | tail fiber assembly protein | - |
| FC640_RS09380 () | 1969573..1969758 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| FC640_RS09385 () | 1970010..1970198 | - | 189 | Protein_1832 | tail fiber assembly protein | - |
| FC640_RS09390 () | 1970194..1970964 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| FC640_RS09395 () | 1971034..1971132 | + | 99 | Protein_1834 | DUF4113 domain-containing protein | - |
| FC640_RS09400 () | 1971455..1971583 | + | 129 | Protein_1835 | helix-turn-helix domain-containing protein | - |
| FC640_RS09405 () | 1971612..1972412 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| FC640_RS09410 () | 1973352..1973660 | - | 309 | Protein_1837 | hypothetical protein ; Integrase | Integrase |
| FC640_RS09415 () | 1973659..1974023 | - | 365 | Protein_1838 | recombinase RecT | - |
| FC640_RS09420 () | 1974020..1974130 | + | 111 | Protein_1839 | replication protein | - |
| FC640_RS09425 () | 1974145..1974540 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| FC640_RS09430 () | 1974827..1975957 | - | 1131 | WP_126524016.1 | GGDEF domain-containing protein | - |
| FC640_RS09435 () | 1976353..1978332 | + | 1980 | WP_133322681.1 | alkyl sulfatase dimerization domain-containing protein | - |
| FC640_RS09440 () | 1978741..1979355 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| FC640_RS09445 () | 1979365..1979523 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| FC640_RS09450 () | 1979656..1980570 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| FC640_RS09455 () | 1981826..1982239 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| FC640_RS09460 () | 1982363..1983571 | + | 1209 | Protein_1847 | IS256 family transposase ISEc39 | Transposase |
| FC640_RS09465 () | 1983717..1983857 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| FC640_RS09470 () | 1984026..1984292 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| FC640_RS09475 () | 1984662..1985081 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| FC640_RS09480 () | 1985317..1985475 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| FC640_RS09485 () | 1985499..1985747 | + | 249 | Protein_1852 | glycosyltransferase | - |
| FC640_RS09490 () | 1985792..1986319 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| FC640_RS09495 () | 1987297..1988035 | - | 739 | Protein_1854 | hypothetical protein ; Integrase | Integrase |
| FC640_RS09500 () | 1988154..1989167 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| FC640_RS09505 () | 1989864..1990067 | - | 204 | WP_024798203.1 | hypothetical protein | VF |
| FC640_RS09510 () | 1990251..1990496 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| FC640_RS09515 () | 1992125..1992601 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| FC640_RS09520 () | 1992930..1993325 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| FC640_RS09525 () | 1994057..1994779 | + | 723 | WP_126524018.1 | hypothetical protein | VF |
| FC640_RS09530 () | 1995064..1995228 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| FC640_RS09535 () | 1995452..1996102 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| FC640_RS09540 () | 1996121..1996312 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| FC640_RS09545 () | 1996423..1996659 | - | 237 | WP_024131167.1 | YebV family protein | - |
| FC640_RS09550 () | 1996777..1998216 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| FC640_RS09555 () | 1998294..2000927 | - | 2634 | WP_001747692.1 | hypothetical protein | VF |
| FC640_RS09560 () | 2000896..2002179 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| FC640_RS09565 () | 2002308..2002805 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| FC640_RS09570 () | 2002903..2003589 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| FC640_RS09575 () | 2003609..2005657 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| FC640_RS09580 () | 2005851..2006732 | + | 882 | WP_000984498.1 | protease HtpX | - |
| FC640_RS09585 () | 2006780..2008153 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| FC640_RS09590 () | 2008330..2009121 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| FC640_RS09595 () | 2009333..2009572 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| FC640_RS09600 () | 2009730..2009873 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| FC640_RS09605 () | 2009944..2010231 | + | 288 | WP_001000660.1 | YebO family protein | - |
| FC640_RS09610 () | 2010880..2011023 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| FC640_RS09615 () | 2011036..2011245 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| FC640_RS09620 () | 2011465..2013210 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| FC640_RS09625 () | 2013276..2014085 | + | 810 | WP_000010924.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| FC640_RS09630 () | 2014082..2014648 | - | 567 | WP_126524021.1 | manganese efflux pump MntP | - |
| FC640_RS09635 () | 2015058..2015516 | - | 459 | WP_126524022.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|