MGE detailed information
MGE type: Conjugative plasmid MGE length: 89077 bp
Accession: NZ_CP099905 Location: 1..89077 Organism: Escherichia albertii strain 133_1_GWG_A Replicon: plasmid plas2
Accession: NZ_CP099905 Location: 1..89077 Organism: Escherichia albertii strain 133_1_GWG_A Replicon: plasmid plas2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY95_RS24510 () | 285..669 | + | 385 | Protein_1 | relaxosome protein TraM | - |
| NIY95_RS24515 () | 860..1547 | + | 688 | Protein_2 | PAS domain-containing protein | - |
| NIY95_RS24520 () | 1643..1870 | + | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NIY95_RS24525 () | 1904..2263 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NIY95_RS24530 () | 2278..2589 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NIY95_RS24535 () | 2611..3177 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NIY95_RS24540 () | 3222..3893 | + | 672 | WP_001340581.1 | type-F conjugative transfer system secretin TraK | - |
| NIY95_RS24545 () | 3893..5320 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIY95_RS24550 () | 5310..5882 | + | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIY95_RS24555 () | 5879..6196 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NIY95_RS24560 () | 6193..6444 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NIY95_RS24565 () | 6441..6956 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIY95_RS24570 () | 7090..7311 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NIY95_RS24575 () | 7471..10098 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| NIY95_RS24580 () | 10095..10481 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| NIY95_RS24585 () | 10478..11110 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| NIY95_RS24590 () | 11107..12099 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NIY95_RS24595 () | 12125..12586 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| NIY95_RS24600 () | 12616..13068 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| NIY95_RS24605 () | 13096..13734 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIY95_RS24610 () | 13731..15539 | + | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIY95_RS24615 () | 15566..15823 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NIY95_RS24620 () | 15816..16559 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIY95_RS24625 () | 16575..16922 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| NIY95_RS24630 () | 17041..17325 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIY95_RS24635 () | 17312..17857 | + | 546 | WP_000059847.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIY95_RS24640 () | 17787..18149 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| NIY95_RS24645 () | 18149..19522 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| NIY95_RS24650 () | 19519..22341 | + | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIY95_RS24655 () | 22356..22859 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| NIY95_RS24660 () | 22912..23622 | + | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NIY95_RS24665 () | 23875..26091 | + | 2217 | WP_153449148.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIY95_RS24670 () | 26091..31361 | + | 5271 | WP_256876176.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIY95_RS24675 () | 31381..32127 | + | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIY95_RS24680 () | 32186..33046 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| NIY95_RS24685 () | 33149..33709 | + | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIY95_RS24690 () | 33838..34050 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NIY95_RS24695 () | 34295..34756 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIY95_RS24700 () | 34802..35011 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIY95_RS24705 () | 35049..35639 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIY95_RS24710 () | 35879..36136 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIY95_RS24715 () | 36240..36420 | + | 181 | Protein_42 | protein CopA/IncA | - |
| NIY95_RS24720 () | 36439..37296 | + | 858 | WP_000130642.1 | incFII family plasmid replication initiator RepA | - |
| NIY95_RS24725 () | 38101..38335 | - | 235 | Protein_44 | IS110 family transposase | - |
| NIY95_RS24730 () | 38327..39242 | - | 916 | Protein_45 | IS630 family transposase ISSpu2 | Transposase |
| NIY95_RS24735 () | 39408..40043 | - | 636 | WP_074458670.1 | hypothetical protein | VF |
| NIY95_RS24740 () | 40554..40950 | - | 397 | Protein_47 | IS481 family transposase | - |
| NIY95_RS24755 () | 43854..44019 | + | 166 | Protein_50 | IS3 family transposase | - |
| NIY95_RS24760 () | 44291..51967 | + | 7677 | WP_256880889.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| NIY95_RS24770 () | 53284..54491 | + | 1208 | WP_256877819.1 | IS3 family transposase ISEc48 | Transposase |
| NIY95_RS24775 () | 54537..54735 | + | 199 | Protein_54 | hypothetical protein | - |
| NIY95_RS24780 () | 54719..56368 | + | 1650 | WP_256876217.1 | hypothetical protein | VF |
| NIY95_RS24785 () | 56469..56650 | + | 182 | Protein_56 | IS3 family transposase | - |
| NIY95_RS24790 () | 56656..56907 | - | 252 | Protein_57 | IS110 family transposase | - |
| NIY95_RS24795 () | 56973..57074 | + | 102 | Protein_58 | hypothetical protein | - |
| NIY95_RS24800 () | 57195..57548 | + | 354 | Protein_59 | tyrosine-type recombinase/integrase | - |
| NIY95_RS24805 () | 57606..58403 | - | 798 | WP_146707378.1 | IS21 family transposase IS21 | Transposase |
| NIY95_RS24810 () | 58403..59575 | - | 1173 | WP_256876216.1 | IS21 family transposase IS21 | Transposase |
| NIY95_RS24815 () | 59676..60017 | - | 342 | Protein_62 | protein RepA | - |
| NIY95_RS24820 () | 60554..61150 | - | 597 | WP_256876215.1 | hypothetical protein | - |
| NIY95_RS24825 () | 61138..61407 | - | 270 | WP_256876214.1 | hypothetical protein | - |
| NIY95_RS24830 () | 61726..63297 | + | 1572 | WP_256876213.1 | ATP-binding protein | - |
| NIY95_RS24835 () | 63505..64485 | - | 981 | WP_256876212.1 | hypothetical protein | - |
| NIY95_RS24840 () | 64625..65041 | - | 417 | WP_256876211.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIY95_RS24845 () | 65038..65268 | - | 231 | WP_256876210.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIY95_RS24850 () | 65837..66250 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NIY95_RS24855 () | 66252..67034 | + | 783 | WP_021533580.1 | site-specific integrase | - |
| NIY95_RS24860 () | 67207..67560 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NIY95_RS24865 () | 67610..68425 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIY95_RS24870 () | 68668..69195 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| NIY95_RS24875 () | 69213..70748 | - | 1536 | WP_256876209.1 | pore-forming bacteriocin colicin B | - |
| NIY95_RS24880 () | 71189..71701 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| NIY95_RS24885 () | 71852..72202 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| NIY95_RS24890 () | 72205..73167 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NIY95_RS24895 () | 73314..73606 | + | 293 | Protein_78 | hypothetical protein | - |
| NIY95_RS24900 () | 73683..74366 | + | 684 | WP_000085940.1 | DNA methylase | - |
| NIY95_RS24905 () | 74367..74588 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NIY95_RS24910 () | 74518..75036 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| NIY95_RS24915 () | 75081..75851 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| NIY95_RS24920 () | 76264..76689 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| NIY95_RS24925 () | 76736..77158 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NIY95_RS24930 () | 77155..77346 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| NIY95_RS24935 () | 78384..78614 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NIY95_RS24940 () | 78666..80027 | + | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| NIY95_RS24945 () | 80075..80638 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NIY95_RS24950 () | 80790..81017 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| NIY95_RS24955 () | 81258..81464 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIY95_RS24960 () | 81490..82029 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NIY95_RS24965 () | 82091..82324 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| NIY95_RS24970 () | 82389..84347 | + | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NIY95_RS24975 () | 84402..84836 | + | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NIY95_RS24980 () | 84833..85595 | + | 763 | Protein_95 | plasmid SOS inhibition protein A | - |
| NIY95_RS24985 () | 85564..85752 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 85564..85788 | + | 225 | NuclAT_0 | - | - |
| - () | 85564..85788 | + | 225 | NuclAT_0 | - | - |
| - () | 85564..85788 | + | 225 | NuclAT_0 | - | - |
| - () | 85564..85788 | + | 225 | NuclAT_0 | - | - |
| - | 85721..85786 | - | 66 | - | - | - |
| NIY95_RS24990 () | 85774..85923 | + | 150 | Protein_97 | plasmid maintenance protein Mok | - |
| NIY95_RS24995 () | 85865..85990 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NIY95_RS25000 () | 86210..86440 | + | 231 | WP_256876178.1 | hypothetical protein | - |
| NIY95_RS25005 () | 86438..86611 | - | 174 | Protein_100 | hypothetical protein | - |
| NIY95_RS25010 () | 86681..86887 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIY95_RS25015 () | 86912..87199 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| NIY95_RS25020 () | 87319..88140 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|