MGE detailed information
MGE type: Conjugative plasmid MGE length: 89097 bp
Accession: NZ_CP099885 Location: 1..89097 Organism: Escherichia albertii strain 231_1_NP_B Replicon: plasmid plas2
Accession: NZ_CP099885 Location: 1..89097 Organism: Escherichia albertii strain 231_1_NP_B Replicon: plasmid plas2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ20_RS24110 () | 668..829 | + | 162 | WP_256880875.1 | hypothetical protein | - |
| NIZ20_RS24115 () | 1234..2213 | - | 980 | Protein_2 | hypothetical protein | - |
| NIZ20_RS24120 () | 2353..2769 | - | 417 | WP_256876211.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIZ20_RS24125 () | 2766..2996 | - | 231 | WP_256876210.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIZ20_RS24130 () | 3565..3978 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NIZ20_RS24135 () | 3980..4762 | + | 783 | WP_021533580.1 | site-specific integrase | - |
| NIZ20_RS24140 () | 4935..5288 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NIZ20_RS24145 () | 5338..6153 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIZ20_RS24150 () | 6396..6923 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| NIZ20_RS24155 () | 6941..8476 | - | 1536 | WP_256876209.1 | pore-forming bacteriocin colicin B | - |
| NIZ20_RS24160 () | 8917..9429 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| NIZ20_RS24165 () | 9580..9930 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| NIZ20_RS24170 () | 9933..10895 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NIZ20_RS24175 () | 11042..11334 | + | 293 | Protein_14 | hypothetical protein | - |
| NIZ20_RS24180 () | 11411..12094 | + | 684 | WP_000085940.1 | DNA methylase | - |
| NIZ20_RS24185 () | 12095..12316 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NIZ20_RS24190 () | 12246..12764 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| NIZ20_RS24195 () | 12809..13579 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| NIZ20_RS24200 () | 13992..14417 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| NIZ20_RS24205 () | 14464..14886 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NIZ20_RS24210 () | 14883..15074 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| NIZ20_RS24215 () | 16112..16342 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NIZ20_RS24220 () | 16394..17755 | + | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| NIZ20_RS24225 () | 17803..18366 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NIZ20_RS24230 () | 18518..18745 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| NIZ20_RS24235 () | 18986..19192 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ20_RS24240 () | 19218..19757 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NIZ20_RS24245 () | 19819..20052 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| NIZ20_RS24250 () | 20117..22075 | + | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NIZ20_RS24255 () | 22130..22564 | + | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NIZ20_RS24260 () | 22561..23323 | + | 763 | Protein_31 | plasmid SOS inhibition protein A | - |
| NIZ20_RS24265 () | 23292..23480 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 23292..23516 | + | 225 | NuclAT_0 | - | - |
| - () | 23292..23516 | + | 225 | NuclAT_0 | - | - |
| - () | 23292..23516 | + | 225 | NuclAT_0 | - | - |
| - () | 23292..23516 | + | 225 | NuclAT_0 | - | - |
| - | 23449..23514 | - | 66 | - | - | - |
| NIZ20_RS24270 () | 23502..23651 | + | 150 | Protein_33 | plasmid maintenance protein Mok | - |
| NIZ20_RS24275 () | 23593..23718 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NIZ20_RS24280 () | 23938..24168 | + | 231 | WP_256876178.1 | hypothetical protein | - |
| NIZ20_RS24285 () | 24166..24339 | - | 174 | Protein_36 | hypothetical protein | - |
| NIZ20_RS24290 () | 24409..24615 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ20_RS24295 () | 24640..24927 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| NIZ20_RS24300 () | 25047..25868 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NIZ20_RS24305 () | 26165..26812 | - | 648 | WP_256876177.1 | hypothetical protein | VF |
| NIZ20_RS24310 () | 27089..27472 | + | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIZ20_RS24315 () | 27663..28349 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NIZ20_RS24320 () | 28443..28670 | + | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NIZ20_RS24325 () | 28704..29063 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NIZ20_RS24330 () | 29078..29389 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NIZ20_RS24335 () | 29411..29977 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NIZ20_RS24340 () | 29964..30692 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NIZ20_RS24345 () | 30692..32119 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIZ20_RS24350 () | 32109..32681 | + | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIZ20_RS24355 () | 32678..32995 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NIZ20_RS24360 () | 32992..33243 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NIZ20_RS24365 () | 33240..33755 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIZ20_RS24370 () | 33889..34110 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NIZ20_RS24375 () | 34270..36897 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| NIZ20_RS24380 () | 36894..37280 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| NIZ20_RS24385 () | 37277..37909 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| NIZ20_RS24390 () | 37906..38898 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NIZ20_RS24395 () | 38924..39385 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| NIZ20_RS24400 () | 39415..39867 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| NIZ20_RS24405 () | 39895..40533 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIZ20_RS24410 () | 40530..42338 | + | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIZ20_RS24415 () | 42365..42622 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NIZ20_RS24420 () | 42615..43358 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIZ20_RS24425 () | 43374..43721 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| NIZ20_RS24430 () | 43840..44124 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIZ20_RS24435 () | 44111..44656 | + | 546 | WP_000059847.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIZ20_RS24440 () | 44586..44948 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| NIZ20_RS24445 () | 44948..46321 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| NIZ20_RS24450 () | 46318..49140 | + | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIZ20_RS24455 () | 49155..49658 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| NIZ20_RS24460 () | 49711..50421 | + | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NIZ20_RS24465 () | 50674..52890 | + | 2217 | WP_153449148.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIZ20_RS24470 () | 52890..58160 | + | 5271 | WP_256876176.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIZ20_RS24475 () | 58180..58926 | + | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIZ20_RS24480 () | 58985..59845 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| NIZ20_RS24485 () | 59948..60508 | + | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIZ20_RS24490 () | 60637..60849 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NIZ20_RS24495 () | 61094..61555 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIZ20_RS24500 () | 61601..61810 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIZ20_RS24505 () | 61848..62438 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIZ20_RS24510 () | 62678..62935 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIZ20_RS24515 () | 63039..63219 | + | 181 | Protein_82 | protein CopA/IncA | - |
| NIZ20_RS24520 () | 63238..64095 | + | 858 | WP_000130642.1 | incFII family plasmid replication initiator RepA | - |
| NIZ20_RS24525 () | 64900..65134 | - | 235 | Protein_84 | IS110 family transposase | - |
| NIZ20_RS24530 () | 65126..66041 | - | 916 | Protein_85 | IS630 family transposase ISSpu2 | Transposase |
| NIZ20_RS24535 () | 66207..66842 | - | 636 | WP_074458670.1 | hypothetical protein | VF |
| NIZ20_RS24540 () | 67353..67749 | - | 397 | Protein_87 | IS481 family transposase | - |
| NIZ20_RS24555 () | 70653..70818 | + | 166 | Protein_90 | IS3 family transposase | - |
| NIZ20_RS24560 () | 71090..78766 | + | 7677 | WP_256880873.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| NIZ20_RS24570 () | 80083..81290 | + | 1208 | WP_256877819.1 | IS3 family transposase ISEc48 | Transposase |
| NIZ20_RS24575 () | 81336..81534 | + | 199 | Protein_94 | hypothetical protein | - |
| NIZ20_RS24580 () | 81518..83167 | + | 1650 | WP_256876217.1 | hypothetical protein | VF |
| NIZ20_RS24585 () | 83268..83449 | + | 182 | Protein_96 | IS3 family transposase | - |
| NIZ20_RS24590 () | 83455..83706 | - | 252 | Protein_97 | IS110 family transposase | - |
| NIZ20_RS24595 () | 83772..83873 | + | 102 | Protein_98 | hypothetical protein | - |
| NIZ20_RS24600 () | 83994..84347 | + | 354 | Protein_99 | tyrosine-type recombinase/integrase | - |
| NIZ20_RS24605 () | 84405..85202 | - | 798 | WP_146707378.1 | IS21 family transposase IS21 | Transposase |
| NIZ20_RS24610 () | 85202..86374 | - | 1173 | WP_256876216.1 | IS21 family transposase IS21 | Transposase |
| NIZ20_RS24615 () | 86475..86816 | - | 342 | Protein_102 | protein RepA | - |
| NIZ20_RS24620 () | 87353..87949 | - | 597 | WP_256876215.1 | hypothetical protein | - |
| NIZ20_RS24625 () | 87937..88206 | - | 270 | WP_256876214.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|