MGE detailed information
MGE type: Conjugative plasmid MGE length: 105541 bp
Accession: NZ_CP099869 Location: 1..105541 Organism: Escherichia albertii strain 254_1_EW_B Replicon: plasmid plas1
Accession: NZ_CP099869 Location: 1..105541 Organism: Escherichia albertii strain 254_1_EW_B Replicon: plasmid plas1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ25_RS23515 (1027) | 1027..2176 | + | 1150 | Protein_0 | transposase | - |
| NIZ25_RS23520 (2981) | 2981..3841 | - | 861 | Protein_1 | incFII family plasmid replication initiator RepA | - |
| NIZ25_RS23525 (3860) | 3860..4040 | - | 181 | Protein_2 | protein CopA/IncA | - |
| NIZ25_RS23530 (4144) | 4144..4401 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIZ25_RS23535 (4641) | 4641..5231 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIZ25_RS23540 (5269) | 5269..5478 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIZ25_RS23545 (5524) | 5524..5985 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIZ25_RS23550 (6230) | 6230..6442 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NIZ25_RS23555 (6571) | 6571..7131 | - | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIZ25_RS23560 (7234) | 7234..8094 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| NIZ25_RS23565 (8153) | 8153..8899 | - | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIZ25_RS23570 (8919) | 8919..14190 | - | 5272 | Protein_11 | Multifunctional conjugation protein TraI | Relaxase |
| NIZ25_RS23575 (14190) | 14190..16406 | - | 2217 | WP_153449148.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIZ25_RS23580 (16659) | 16659..17369 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NIZ25_RS23585 (17422) | 17422..17925 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| NIZ25_RS23590 (17940) | 17940..20762 | - | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIZ25_RS23595 (20759) | 20759..22132 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| NIZ25_RS23600 (22132) | 22132..22494 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| NIZ25_RS23605 (22424) | 22424..22969 | - | 546 | WP_000059847.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIZ25_RS23610 (22956) | 22956..23240 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIZ25_RS23615 (23359) | 23359..23706 | - | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| NIZ25_RS23620 (23722) | 23722..24465 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIZ25_RS23625 (24458) | 24458..24715 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NIZ25_RS23630 (24742) | 24742..26550 | - | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIZ25_RS23635 (26547) | 26547..27185 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIZ25_RS23640 (27213) | 27213..27665 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| NIZ25_RS23645 (27695) | 27695..28156 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| NIZ25_RS23650 (28182) | 28182..29174 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NIZ25_RS23655 (29171) | 29171..29803 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| NIZ25_RS23660 (29800) | 29800..30186 | - | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| NIZ25_RS23665 (30183) | 30183..32810 | - | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| NIZ25_RS23670 (32970) | 32970..33191 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NIZ25_RS23675 (33325) | 33325..33840 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIZ25_RS23680 (33837) | 33837..34088 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NIZ25_RS23685 (34085) | 34085..34402 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NIZ25_RS23690 (34399) | 34399..34971 | - | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIZ25_RS23695 (34961) | 34961..36388 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIZ25_RS23700 (36388) | 36388..37116 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NIZ25_RS23705 (37103) | 37103..37669 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NIZ25_RS23710 (37691) | 37691..38002 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NIZ25_RS23715 (38017) | 38017..38376 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NIZ25_RS23720 (38410) | 38410..38637 | - | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NIZ25_RS23725 (38731) | 38731..39417 | - | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NIZ25_RS23730 (39608) | 39608..39991 | - | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIZ25_RS23735 (40268) | 40268..40915 | + | 648 | WP_256876177.1 | hypothetical protein | VF |
| NIZ25_RS23740 (41212) | 41212..42033 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NIZ25_RS23745 (42153) | 42153..42440 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NIZ25_RS23750 (42465) | 42465..42671 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ25_RS23755 (42741) | 42741..42914 | + | 174 | Protein_48 | hypothetical protein | - |
| NIZ25_RS23760 (42912) | 42912..43142 | - | 231 | WP_256876178.1 | hypothetical protein | - |
| NIZ25_RS23765 (43362) | 43362..43487 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NIZ25_RS23770 (43429) | 43429..43578 | - | 150 | Protein_51 | plasmid maintenance protein Mok | - |
| - (43564) | 43564..43788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (43564) | 43564..43788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (43564) | 43564..43788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (43564) | 43564..43788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| NIZ25_RS23775 (43600) | 43600..43788 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NIZ25_RS23780 (43757) | 43757..44519 | - | 763 | Protein_53 | plasmid SOS inhibition protein A | - |
| NIZ25_RS23785 (44516) | 44516..44950 | - | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NIZ25_RS23790 (45005) | 45005..46963 | - | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NIZ25_RS23795 (47028) | 47028..47261 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| NIZ25_RS23800 (47323) | 47323..47862 | - | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NIZ25_RS23805 (47888) | 47888..48094 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ25_RS23810 (48335) | 48335..48562 | - | 228 | WP_071594011.1 | hypothetical protein | - |
| NIZ25_RS23815 (48714) | 48714..49277 | - | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NIZ25_RS23820 (49325) | 49325..50686 | - | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| NIZ25_RS23825 (50738) | 50738..50968 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NIZ25_RS23830 (52006) | 52006..52197 | - | 192 | WP_001027519.1 | hypothetical protein | - |
| NIZ25_RS23835 (52194) | 52194..52616 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NIZ25_RS23840 (52663) | 52663..53088 | - | 426 | WP_001198941.1 | antirestriction protein | - |
| NIZ25_RS23845 (53501) | 53501..54271 | - | 771 | WP_001006200.1 | hypothetical protein | - |
| NIZ25_RS23850 (54316) | 54316..54834 | - | 519 | WP_223174655.1 | DUF1380 family protein | - |
| NIZ25_RS23855 (54764) | 54764..54985 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| NIZ25_RS23860 (54986) | 54986..55669 | - | 684 | WP_000085940.1 | DNA methylase | - |
| NIZ25_RS23865 (55746) | 55746..56038 | - | 293 | Protein_70 | hypothetical protein | - |
| NIZ25_RS23870 (56185) | 56185..57147 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NIZ25_RS23875 (57150) | 57150..57500 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| NIZ25_RS23880 (57651) | 57651..58163 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| NIZ25_RS23885 (58604) | 58604..60139 | + | 1536 | WP_256876209.1 | pore-forming bacteriocin colicin B | - |
| NIZ25_RS23890 (60157) | 60157..60684 | - | 528 | WP_000203268.1 | colicin B immunity protein | - |
| NIZ25_RS23895 (60927) | 60927..61742 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIZ25_RS23900 (61792) | 61792..62145 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NIZ25_RS23905 (62318) | 62318..63100 | - | 783 | WP_021533580.1 | site-specific integrase | - |
| NIZ25_RS23910 (63102) | 63102..63515 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| NIZ25_RS23915 (64084) | 64084..64314 | + | 231 | WP_256876210.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| NIZ25_RS23920 (64311) | 64311..64727 | + | 417 | WP_256876211.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIZ25_RS23925 (64867) | 64867..65847 | + | 981 | WP_256876212.1 | hypothetical protein | - |
| NIZ25_RS23930 (66055) | 66055..67626 | - | 1572 | WP_256876213.1 | ATP-binding protein | - |
| NIZ25_RS23935 (67945) | 67945..68214 | + | 270 | WP_256876214.1 | hypothetical protein | - |
| NIZ25_RS23940 (68202) | 68202..68798 | + | 597 | WP_256876215.1 | hypothetical protein | - |
| NIZ25_RS23945 (69335) | 69335..69676 | + | 342 | Protein_86 | protein RepA | - |
| NIZ25_RS23950 (69777) | 69777..70949 | + | 1173 | WP_256876216.1 | IS21 family transposase IS21 | Transposase |
| NIZ25_RS23955 (70949) | 70949..71746 | + | 798 | WP_146707378.1 | IS21 family transposase IS21 | Transposase |
| NIZ25_RS23960 (71804) | 71804..72157 | - | 354 | Protein_89 | tyrosine-type recombinase/integrase | - |
| NIZ25_RS23965 (72278) | 72278..72379 | - | 102 | Protein_90 | hypothetical protein | - |
| NIZ25_RS23970 (72445) | 72445..72696 | + | 252 | Protein_91 | IS110 family transposase | - |
| NIZ25_RS23975 (72702) | 72702..72883 | - | 182 | Protein_92 | IS3 family transposase | - |
| NIZ25_RS23980 (72984) | 72984..74633 | - | 1650 | WP_256876217.1 | hypothetical protein | VF |
| NIZ25_RS23985 (74617) | 74617..74815 | - | 199 | Protein_94 | hypothetical protein | - |
| NIZ25_RS23995 (76232) | 76232..77460 | + | 1229 | WP_256876296.1 | IS3 family transposase IS2 | Transposase |
| NIZ25_RS24000 (77385) | 77385..85061 | - | 7677 | WP_256880889.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| NIZ25_RS24005 (85333) | 85333..85498 | - | 166 | Protein_98 | IS3 family transposase | - |
| NIZ25_RS24010 (85662) | 85662..86824 | + | 1163 | WP_256876281.1 | IS3 family transposase IS911 | Transposase |
| NIZ25_RS24015 (86913) | 86913..88120 | + | 1208 | WP_256877819.1 | IS3 family transposase ISEc48 | Transposase |
| NIZ25_RS24020 (88402) | 88402..88798 | + | 397 | Protein_101 | IS481 family transposase | - |
| NIZ25_RS24025 (89309) | 89309..89944 | + | 636 | WP_074458670.1 | hypothetical protein | VF |
| NIZ25_RS24030 (90110) | 90110..91025 | + | 916 | Protein_103 | IS630 family transposase | - |
| NIZ25_RS24035 (91017) | 91017..91251 | + | 235 | Protein_104 | IS110 family transposase IS1663 | Transposase |
| NIZ25_RS24040 (92056) | 92056..92913 | - | 858 | WP_000130642.1 | incFII family plasmid replication initiator RepA | - |
| NIZ25_RS24045 (92932) | 92932..93112 | - | 181 | Protein_106 | protein CopA/IncA | - |
| NIZ25_RS24050 (93216) | 93216..93473 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIZ25_RS24055 (93713) | 93713..94303 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIZ25_RS24060 (94341) | 94341..94550 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIZ25_RS24065 (94596) | 94596..95057 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIZ25_RS24070 (95256) | 95256..95513 | - | 258 | WP_172693365.1 | ANR family transcriptional regulator | - |
| NIZ25_RS24075 (95643) | 95643..96203 | - | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIZ25_RS24080 (96306) | 96306..97166 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| NIZ25_RS24085 (97225) | 97225..97971 | - | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIZ25_RS24090 (97991) | 97991..103261 | - | 5271 | WP_256876176.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIZ25_RS24095 (103261) | 103261..105478 | - | 2218 | Protein_116 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|