MGE detailed information
MGE type: Prophage MGE length: 61440 bp
Accession: NZ_CP098716 Location: 2064656..2126095 Organism: Yersinia ruckeri strain NVI-11294 Replicon: chromosome
Accession: NZ_CP098716 Location: 2064656..2126095 Organism: Yersinia ruckeri strain NVI-11294 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND011_RS09450 (ND011_09440) | 2061129..2061758 | + | 630 | WP_004721714.1 | hypothetical protein | - |
| ND011_RS09455 (ND011_09445) | 2061965..2062651 | + | 687 | WP_004721715.1 | hypothetical protein | - |
| ND011_RS09460 (ND011_09450) | 2063392..2064537 | + | 1146 | WP_004721718.1 | YRC family class C beta-lactamase | - |
| ND011_RS09465 (ND011_09455) | 2064614..2065261 | + | 648 | WP_238692846.1 | hypothetical protein ; Integrase | Integrase |
| ND011_RS09470 (ND011_09460) | 2065560..2065727 | + | 168 | WP_193553623.1 | hypothetical protein | - |
| ND011_RS09475 (ND011_09465) | 2066032..2068323 | - | 2292 | WP_096823432.1 | AAA family ATPase | - |
| ND011_RS09480 (ND011_09470) | 2068807..2070534 | - | 1728 | WP_096823433.1 | ISNCY family transposase ISPa4 | Transposase |
| ND011_RS09485 (ND011_09475) | 2070779..2079127 | - | 8349 | WP_096823434.1 | LPD5 domain-containing protein | - |
| ND011_RS09490 (ND011_09480) | 2079393..2079554 | - | 162 | WP_157836120.1 | hypothetical protein | - |
| ND011_RS09495 (ND011_09485) | 2079629..2081017 | - | 1389 | WP_096823435.1 | hypothetical protein | - |
| ND011_RS09500 (ND011_09490) | 2081030..2081290 | - | 261 | WP_096823436.1 | bacteriocin | - |
| ND011_RS09505 (ND011_09495) | 2081290..2081673 | - | 384 | WP_096823437.1 | hypothetical protein | - |
| ND011_RS09510 (ND011_09500) | 2081676..2082335 | - | 660 | WP_096823438.1 | hypothetical protein | - |
| ND011_RS09515 (ND011_09505) | 2082591..2082965 | - | 375 | WP_096823439.1 | hypothetical protein | - |
| ND011_RS09520 (ND011_09510) | 2082940..2083968 | - | 1029 | WP_096823440.1 | hypothetical protein | - |
| ND011_RS09525 (ND011_09515) | 2084035..2085249 | - | 1215 | WP_038246004.1 | DUF1983 domain-containing protein | - |
| ND011_RS09530 (ND011_09520) | 2085246..2086874 | - | 1629 | WP_096823441.1 | hypothetical protein | - |
| ND011_RS09535 (ND011_09525) | 2087200..2087631 | + | 432 | Protein_1850 | Hcp family type VI secretion system effector | - |
| ND011_RS09540 (ND011_09530) | 2087753..2087899 | - | 147 | WP_157836125.1 | hypothetical protein | - |
| ND011_RS09545 (ND011_09535) | 2088284..2090653 | - | 2370 | WP_096823442.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ND011_RS09550 (ND011_09540) | 2090650..2091303 | - | 654 | WP_096823443.1 | hypothetical protein | - |
| ND011_RS09555 (ND011_09545) | 2091303..2091890 | - | 588 | WP_096823444.1 | hypothetical protein | - |
| ND011_RS09560 (ND011_09550) | 2091893..2092333 | - | 441 | WP_038245291.1 | hypothetical protein | - |
| ND011_RS09565 (ND011_09555) | 2092388..2092771 | - | 384 | WP_096823445.1 | hypothetical protein | - |
| ND011_RS09570 (ND011_09560) | 2092834..2094057 | - | 1224 | WP_038245287.1 | N4-gp56 family major capsid protein | - |
| ND011_RS09575 (ND011_09565) | 2094118..2095170 | - | 1053 | WP_096823446.1 | hypothetical protein | - |
| ND011_RS09580 (ND011_09570) | 2095441..2097567 | - | 2127 | WP_096823447.1 | portal protein | - |
| ND011_RS09585 (ND011_09575) | 2097567..2099231 | - | 1665 | WP_096823679.1 | terminase | - |
| ND011_RS09590 (ND011_09580) | 2099270..2100127 | - | 858 | WP_096823448.1 | terminase | - |
| ND011_RS09595 (ND011_09585) | 2100193..2100537 | - | 345 | WP_051847063.1 | Gp49 family protein | - |
| ND011_RS09600 (ND011_09590) | 2100534..2101076 | - | 543 | WP_096823449.1 | DUF2570 domain-containing protein | - |
| ND011_RS09605 (ND011_09595) | 2101208..2101696 | - | 489 | WP_096823450.1 | lysozyme | - |
| ND011_RS09610 (ND011_09600) | 2101696..2101908 | - | 213 | WP_038245276.1 | class II holin family protein | - |
| ND011_RS09615 (ND011_09605) | 2102081..2102890 | - | 810 | WP_096823451.1 | hypothetical protein | - |
| ND011_RS09620 (ND011_09610) | 2102981..2103364 | - | 384 | WP_096823452.1 | hypothetical protein | - |
| ND011_RS09625 (ND011_09615) | 2103389..2103859 | - | 471 | WP_096823453.1 | VRR-NUC domain-containing protein | - |
| ND011_RS09630 (ND011_09620) | 2103852..2104184 | - | 333 | WP_096823454.1 | DUF1364 domain-containing protein | - |
| ND011_RS09635 (ND011_09625) | 2104186..2104833 | - | 648 | WP_096823455.1 | DUF1367 family protein | - |
| ND011_RS09640 (ND011_09630) | 2104830..2106842 | - | 2013 | WP_096823456.1 | MT-A70 family methyltransferase | - |
| ND011_RS09645 (ND011_09635) | 2106839..2107765 | - | 927 | WP_096823457.1 | site-specific DNA-methyltransferase | - |
| ND011_RS09650 (ND011_09640) | 2107762..2108109 | - | 348 | WP_096823458.1 | hypothetical protein | - |
| ND011_RS09655 (ND011_09645) | 2108109..2108279 | - | 171 | WP_238692875.1 | DNA translocase FtsK | - |
| ND011_RS09660 (ND011_09650) | 2108346..2109245 | - | 900 | Protein_1875 | recombination-associated protein RdgC | - |
| ND011_RS09665 (ND011_09655) | 2109249..2110022 | - | 774 | WP_096823460.1 | hypothetical protein | - |
| ND011_RS09670 (ND011_09660) | 2110025..2110870 | - | 846 | WP_096823461.1 | hypothetical protein | - |
| ND011_RS09675 (ND011_09665) | 2110879..2111058 | - | 180 | WP_096823462.1 | hypothetical protein | - |
| ND011_RS09680 (ND011_09670) | 2111055..2111417 | - | 363 | WP_096823463.1 | hypothetical protein | - |
| ND011_RS09685 (ND011_09675) | 2111503..2111808 | + | 306 | WP_038243388.1 | hypothetical protein | - |
| ND011_RS09690 (ND011_09680) | 2111890..2112156 | - | 267 | WP_096823464.1 | hypothetical protein | - |
| ND011_RS09695 (ND011_09685) | 2112266..2112937 | + | 672 | WP_096823465.1 | S24 family peptidase | - |
| ND011_RS09700 (ND011_09690) | 2112953..2113303 | + | 351 | WP_096823466.1 | hypothetical protein | - |
| ND011_RS09705 (ND011_09695) | 2113577..2113822 | + | 246 | WP_126940131.1 | hypothetical protein | - |
| ND011_RS09710 (ND011_09700) | 2113905..2114174 | + | 270 | WP_096823468.1 | KTSC domain-containing protein | - |
| ND011_RS09715 (ND011_09705) | 2114214..2114684 | + | 471 | WP_096823469.1 | zinc-finger-containing protein | - |
| ND011_RS09720 (ND011_09710) | 2114700..2115026 | + | 327 | WP_126940132.1 | hypothetical protein | - |
| ND011_RS09725 (ND011_09715) | 2115327..2116172 | + | 846 | WP_238692848.1 | phage recombination protein Bet | - |
| ND011_RS09730 (ND011_09720) | 2116159..2117763 | + | 1605 | WP_096823471.1 | YqaJ viral recombinase family protein | - |
| ND011_RS09735 (ND011_09725) | 2117808..2118947 | + | 1140 | WP_096823472.1 | hypothetical protein | - |
| ND011_RS09740 (ND011_09730) | 2118944..2119372 | + | 429 | WP_096823473.1 | hypothetical protein | - |
| ND011_RS09745 (ND011_09735) | 2119437..2120273 | + | 837 | WP_202976849.1 | hypothetical protein | - |
| ND011_RS09750 (ND011_09740) | 2120417..2120590 | + | 174 | WP_170854680.1 | hypothetical protein | - |
| ND011_RS09755 (ND011_09745) | 2120781..2121035 | + | 255 | WP_193553624.1 | hypothetical protein | - |
| ND011_RS09760 (ND011_09750) | 2121152..2121421 | + | 270 | WP_096823474.1 | excisionase | - |
| ND011_RS09765 (ND011_09755) | 2121396..2122505 | + | 1110 | WP_162486764.1 | hypothetical protein ; Integrase | Integrase |
| - | 2122578..2122724 | + | 147 | - | - | Antitoxin Detail |
| - | 2122582..2122675 | - | 94 | - | - | Toxin Detail |
| ND011_RS09770 (ND011_09760) | 2122834..2123175 | - | 342 | WP_004721721.1 | YebY family protein | - |
| ND011_RS09775 (ND011_09765) | 2123270..2124154 | - | 885 | WP_004721723.1 | copper homeostasis membrane protein CopD | - |
| ND011_RS09780 (ND011_09770) | 2124156..2124542 | - | 387 | WP_038243346.1 | CopC domain-containing protein YobA | - |
| ND011_RS09785 (ND011_09775) | 2124947..2125462 | - | 516 | WP_004721727.1 | non-heme ferritin | - |
| ND011_RS09790 (ND011_09780) | 2125865..2126095 | + | 231 | WP_038243344.1 | DNA polymerase III subunit theta | - |
| ND011_RS09795 (ND011_09785) | 2126218..2127168 | - | 951 | WP_004721733.1 | prolyl aminopeptidase | - |
| ND011_RS09800 (ND011_09790) | 2128035..2128698 | + | 664 | Protein_1903 | exodeoxyribonuclease X | - |
| ND011_RS09805 (ND011_09795) | 2128704..2130734 | - | 2031 | WP_038276022.1 | prolyl oligopeptidase family serine peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|