MGE detailed information
MGE type: Genomic_island MGE length: 9590 bp
Accession: NZ_CP098223 Location: 4131582..4141171 Organism: Escherichia coli strain Z0117EC0005 Replicon: chromosome
Accession: NZ_CP098223 Location: 4131582..4141171 Organism: Escherichia coli strain Z0117EC0005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY12_RS19710 (4127413) | 4127413..4128744 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| NBY12_RS19715 (4128766) | 4128766..4129755 | - | 990 | WP_000548345.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NBY12_RS19720 (4129854) | 4129854..4130792 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NBY12_RS19725 (4131107) | 4131107..4131343 | + | 237 | WP_050009867.1 | transcriptional activator TdcR | - |
| NBY12_RS19730 (4131582) | 4131582..4132121 | + | 540 | WP_001352916.1 | hypothetical protein | - |
| NBY12_RS19735 (4132143) | 4132143..4133312 | + | 1170 | WP_032303827.1 | hypothetical protein | - |
| NBY12_RS19745 (4133994) | 4133994..4135139 | - | 1146 | WP_001352915.1 | glycerate 2-kinase | - |
| NBY12_RS19750 (4135236) | 4135236..4136126 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NBY12_RS19755 (4136156) | 4136156..4136926 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NBY12_RS19760 (4136942) | 4136942..4138276 | - | 1335 | WP_032185178.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NBY12_RS19765 (4138652) | 4138652..4140223 | + | 1572 | WP_137498661.1 | galactarate dehydratase | - |
| NBY12_RS19770 (4140372) | 4140372..4140707 | + | 336 | WP_001296435.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NBY12_RS19775 (4140707) | 4140707..4141171 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NBY12_RS19780 (4141226) | 4141226..4142035 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NBY12_RS19785 (4142284) | 4142284..4143564 | + | 1281 | WP_032303875.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NBY12_RS19790 (4143587) | 4143587..4144060 | + | 474 | WP_032303829.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NBY12_RS19795 (4144071) | 4144071..4144850 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NBY12_RS19800 (4144840) | 4144840..4145718 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NBY12_RS19805 (4145736) | 4145736..4146170 | + | 435 | WP_032303830.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|