MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37150 bp
Accession: NZ_CP098222 Location: 1..37150 Organism: Escherichia coli strain Z0117EC0013 Replicon: plasmid pZ0117EC0013-3
Accession: NZ_CP098222 Location: 1..37150 Organism: Escherichia coli strain Z0117EC0013 Replicon: plasmid pZ0117EC0013-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY13_RS24705 (2) | 2..325 | - | 324 | Protein_0 | JAB domain-containing protein | - |
| NBY13_RS24710 (341) | 341..812 | - | 472 | Protein_1 | antirestriction protein | - |
| NBY13_RS24715 (1072) | 1072..1887 | - | 816 | Protein_2 | DUF932 domain-containing protein | - |
| NBY13_RS24720 (2106) | 2106..2504 | - | 399 | Protein_3 | hypothetical protein | - |
| NBY13_RS24725 (2531) | 2531..3209 | - | 679 | Protein_4 | hypothetical protein | - |
| NBY13_RS24730 (3350) | 3350..4413 | - | 1064 | Protein_5 | patatin-like phospholipase family protein | - |
| NBY13_RS24735 (4410) | 4410..5310 | - | 901 | Protein_6 | diguanylate cyclase regulator RdcB family protein | - |
| NBY13_RS24740 (5307) | 5307..7664 | - | 2358 | Protein_7 | dynamin family protein | - |
| NBY13_RS24745 (7883) | 7883..8314 | - | 432 | Protein_8 | hypothetical protein | - |
| NBY13_RS24750 (8742) | 8742..10901 | + | 2160 | Protein_9 | TonB-dependent receptor | - |
| NBY13_RS24755 (10912) | 10912..11903 | + | 992 | Protein_10 | ABC transporter substrate-binding protein | - |
| NBY13_RS24760 (11922) | 11922..12993 | + | 1072 | Protein_11 | Vitamin B12 import system permease protein BtuC | VF |
| NBY13_RS24765 (12974) | 12974..13734 | + | 761 | Protein_12 | ABC transporter ATP-binding protein | - |
| NBY13_RS24770 (13788) | 13788..14045 | + | 258 | WP_001163787.1 | hypothetical protein | - |
| NBY13_RS24775 (14572) | 14572..15724 | - | 1153 | Protein_14 | hypothetical protein | - |
| NBY13_RS24780 (16910) | 16910..17005 | - | 96 | Protein_15 | AAA family ATPase | - |
| NBY13_RS24785 (17248) | 17248..18266 | + | 1019 | Protein_16 | IS21 family transposase IS100kyp | Transposase |
| NBY13_RS24790 (18263) | 18263..19045 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| NBY13_RS24795 (19113) | 19113..19721 | + | 609 | Protein_18 | IS66 family transposase ISEc22 | Transposase |
| NBY13_RS24800 (19784) | 19784..20575 | - | 792 | Protein_19 | DUF4198 domain-containing protein | - |
| NBY13_RS24805 (20582) | 20582..22550 | - | 1969 | Protein_20 | Hemin receptor | VF |
| NBY13_RS24810 (22832) | 22832..23155 | + | 324 | Protein_21 | IS3 family transposase IS2 | Transposase |
| NBY13_RS24815 (23792) | 23792..24064 | + | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| NBY13_RS24820 (24510) | 24510..24685 | + | 176 | Protein_23 | IS3 family transposase | - |
| NBY13_RS24825 (24911) | 24911..26080 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| NBY13_RS24830 (26447) | 26447..26635 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| NBY13_RS24835 (26756) | 26756..27496 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| NBY13_RS24840 (27781) | 27781..28758 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| NBY13_RS24845 (29425) | 29425..30128 | + | 704 | Protein_28 | IS6 family transposase IS15DII | Transposase |
| NBY13_RS24850 (30181) | 30181..31677 | + | 1497 | WP_109942547.1 | IS66 family transposase ISEc23 | Transposase |
| NBY13_RS24855 (31755) | 31755..32032 | + | 278 | Protein_30 | DUF2726 domain-containing protein | - |
| - (32008) | 32008..32067 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (32008) | 32008..32067 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (32008) | 32008..32067 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (32008) | 32008..32067 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| NBY13_RS24860 (32112) | 32112..32246 | + | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| NBY13_RS24865 (32542) | 32542..32796 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| NBY13_RS24875 (33031) | 33031..33105 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| NBY13_RS24880 (33098) | 33098..33954 | + | 857 | Protein_34 | incFII family plasmid replication initiator RepA | - |
| NBY13_RS24885 (34890) | 34890..35042 | + | 153 | WP_171004014.1 | hypothetical protein | - |
| NBY13_RS24890 (35090) | 35090..35335 | - | 246 | WP_250838133.1 | hypothetical protein | - |
| NBY13_RS24895 (35352) | 35352..35540 | + | 189 | WP_231550408.1 | CPBP family glutamic-type intramembrane protease | - |
| NBY13_RS24900 (35633) | 35633..35886 | + | 254 | Protein_38 | type II toxin-antitoxin system antitoxin PemI | - |
| NBY13_RS24905 (35855) | 35855..36217 | + | 363 | Protein_39 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NBY13_RS24910 (36608) | 36608..36874 | + | 267 | WP_250838134.1 | DUF262 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|