MGE detailed information

MGE type: Conjugative plasmid        MGE length: 157136 bp
Accession: NZ_CP098215        Location: 1..157136         Organism: Escherichia coli strain Z0117EC0036       Replicon: plasmid pZ0117EC0036-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NBY15_RS24555 (594) 594..1088 + 495 WP_001442119.1 hypothetical protein -
NBY15_RS24560 (1088) 1088..1354 + 267 WP_000627831.1 hypothetical protein -
NBY15_RS24565 (1831) 1831..2322 - 492 WP_000068661.1 hypothetical protein -
NBY15_RS24570 (2256) 2256..5222 - 2967 WP_072743082.1 Tn3 family transposase TnpA_TnAs3 Transposase
NBY15_RS24575 (5225) 5225..5635 - 411 Protein_5 recombinase family protein -
NBY15_RS24580 (5699) 5699..6403 + 705 WP_073520228.1 IS6 family transposase IS15DI Transposase
NBY15_RS24585 (6455) 6455..6613 - 159 Protein_7 Tn3 family transposase TnpR_TnAs3 Transposase
NBY15_RS24590 (6739) 6739..7089 - 351 WP_000454193.1 DUF3330 domain-containing protein -
NBY15_RS24595 (7292) 7292..8305 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
NBY15_RS24600 (8463) 8463..8936 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
NBY15_RS24605 (9067) 9067..9855 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
NBY15_RS24610 (10061) 10061..10408 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
NBY15_RS24615 (10402) 10402..11241 + 840 WP_000259031.1 Dihydropteroate synthase ARG
NBY15_RS24620 (11369) 11369..11572 + 204 WP_000376616.1 hypothetical protein -
NBY15_RS24625 (11728) 11728..12933 + 1206 WP_000184001.1 chromate efflux transporter -
NBY15_RS24630 (12944) 12944..13249 + 306 WP_000130000.1 Transcriptional regulator Relaxase
NBY15_RS24635 (13293) 13293..13358 + 66 Protein_17 EAL domain-containing protein -
NBY15_RS24640 (13476) 13476..14239 + 764 Protein_18 IS6 family transposase IS6100 Transposase
NBY15_RS24645 (14732) 14732..15316 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
NBY15_RS24650 (15316) 15316..16554 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
NBY15_RS24655 (16551) 16551..17456 - 906 WP_000219391.1 hypothetical protein ARG
NBY15_RS24660 (17578) 17578..18282 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NBY15_RS24665 (18343) 18343..18519 + 177 Protein_23 replication protein C, IncQ-type -
NBY15_RS24670 (18827) 18827..19642 + 816 WP_001043260.1 Dihydropteroate synthase ARG
NBY15_RS24675 (19703) 19703..20506 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
NBY15_RS24680 (20506) 20506..21342 + 837 WP_000480972.1 hypothetical protein ARG
NBY15_RS24685 (21396) 21396..21632 + 237 WP_042005022.1 hypothetical protein -
NBY15_RS24690 (21664) 21664..22314 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
NBY15_RS24695 (22420) 22420..23619 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
NBY15_RS24700 (23651) 23651..24511 - 861 WP_000493383.1 EamA family transporter -
NBY15_RS24705 (24520) 24520..24750 - 231 Protein_31 DDE-type integrase/transposase/recombinase -
NBY15_RS24710 (24815) 24815..25519 - 705 Protein_32 IS6 family transposase IS15DI Transposase
NBY15_RS24715 (25726) 25726..25925 + 200 Protein_33 lysis protein -
NBY15_RS24720 (25983) 25983..26276 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
NBY15_RS24725 (26903) 26903..28139 + 1237 Protein_35 IS3 family transposase IS2 Transposase
NBY15_RS24730 (29362) 29362..30555 + 1194 WP_000450494.1 GTP-binding protein -
NBY15_RS24735 (30733) 30733..30882 + 150 Protein_37 IS3 family transposase IS2 Transposase
NBY15_RS24740 (31412) 31412..32512 + 1101 WP_072714138.1 hypothetical protein -
NBY15_RS24745 (32502) 32502..32987 + 486 WP_001015823.1 hypothetical protein -
NBY15_RS24750 (32990) 32990..34816 + 1827 WP_001339650.1 AAA family ATPase -
NBY15_RS24755 (34957) 34957..35238 + 282 WP_072834405.1 hypothetical protein -
NBY15_RS24765 (35997) 35997..36287 - 291 Protein_43 IS3 family transposase IS1203 Transposase
NBY15_RS24770 (36426) 36426..36605 + 180 Protein_44 integrase core domain-containing protein -
NBY15_RS24775 (37902) 37902..38855 + 954 WP_000280980.1 Protease 7 VF
NBY15_RS24780 (39288) 39288..40397 + 1110 WP_000771475.1 SDR family oxidoreductase -
NBY15_RS24785 (40466) 40466..41368 + 903 WP_001312822.1 hypothetical protein VF
NBY15_RS24790 (41742) 41742..41930 + 189 WP_001324033.1 hypothetical protein -
NBY15_RS24795 (42051) 42051..42791 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
NBY15_RS24800 (43076) 43076..44053 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
NBY15_RS24805 (44799) 44799..45122 + 324 Protein_51 IS21 family transposase IS21 Transposase
NBY15_RS24810 (45124) 45124..45228 + 105 Protein_52 AAA family ATPase -
NBY15_RS24815 (45289) 45289..45802 + 514 Protein_53 DUF4113 domain-containing protein -
NBY15_RS24825 (47035) 47035..47949 + 915 WP_000949004.1 putative periplasmic iron-binding protein VF
NBY15_RS24830 (47949) 47949..48776 + 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
NBY15_RS24835 (48773) 48773..49630 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
NBY15_RS24840 (49627) 49627..50484 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
NBY15_RS24845 (50718) 50718..50975 - 258 Protein_59 Tn3 family transposase -
NBY15_RS24850 (50973) 50973..51386 + 414 Protein_60 phosphopyruvate hydratase -
NBY15_RS24855 (51727) 51727..52107 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
NBY15_RS24860 (52487) 52487..53680 - 1194 WP_000095526.1 MFS transporter -
NBY15_RS24865 (53816) 53816..55540 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
NBY15_RS24870 (55541) 55541..56488 + 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
NBY15_RS24875 (56488) 56488..58230 + 1743 WP_001015721.1 Aerobactin synthase VF
NBY15_RS24880 (58227) 58227..59560 + 1334 Protein_66 L-lysine N6-monooxygenase VF
NBY15_RS24885 (59586) 59586..61787 + 2202 WP_000973520.1 Ferric aerobactin receptor VF
NBY15_RS24890 (62272) 62272..62969 + 698 WP_094096600.1 IS1 family transposase IS1S Transposase
NBY15_RS24895 (63269) 63269..64435 + 1167 WP_001238646.1 hypothetical protein VF
NBY15_RS24900 (64435) 64435..65406 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
NBY15_RS24905 (66043) 66043..66212 + 170 Protein_71 hypothetical protein -
NBY15_RS24910 (66395) 66395..66475 - 81 Protein_72 hypothetical protein -
NBY15_RS24915 (66545) 66545..66751 + 207 WP_000275856.1 hypothetical protein -
NBY15_RS24920 (66777) 66777..67316 + 540 WP_000290840.1 single-stranded DNA-binding protein -
NBY15_RS24925 (67384) 67384..67617 + 234 WP_000005987.1 DUF905 family protein -
NBY15_RS24930 (67645) 67645..67842 + 198 Protein_76 hypothetical protein -
NBY15_RS24935 (67897) 67897..68331 + 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
NBY15_RS24940 (68328) 68328..69090 + 763 Protein_78 plasmid SOS inhibition protein A -
NBY15_RS24945 (69059) 69059..69247 - 189 WP_001299721.1 hypothetical protein -
- (69059) 69059..69283 + 225 NuclAT_0 - Antitoxin Detail
- (69059) 69059..69283 + 225 NuclAT_0 - Antitoxin Detail
- (69059) 69059..69283 + 225 NuclAT_0 - Antitoxin Detail
- (69059) 69059..69283 + 225 NuclAT_0 - Antitoxin Detail
NBY15_RS24950 (69269) 69269..69418 + 150 Protein_80 plasmid maintenance protein Mok -
NBY15_RS24955 (69360) 69360..69485 + 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
NBY15_RS24960 (69705) 69705..69935 + 231 WP_071586998.1 hypothetical protein -
NBY15_RS24965 (69933) 69933..70105 - 173 Protein_83 hypothetical protein -
NBY15_RS24970 (70175) 70175..70381 + 207 WP_000547968.1 hypothetical protein -
NBY15_RS24975 (70406) 70406..70693 + 288 WP_000107535.1 hypothetical protein -
NBY15_RS24980 (70811) 70811..71632 + 822 WP_001234426.1 DUF932 domain-containing protein -
NBY15_RS24985 (71929) 71929..72519 - 591 WP_001376243.1 hypothetical protein VF
NBY15_RS24990 (72852) 72852..73235 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
NBY15_RS24995 (73422) 73422..74111 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
NBY15_RS25000 (74204) 74204..74605 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
NBY15_RS25005 (74638) 74638..75003 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
NBY15_RS25010 (75018) 75018..75329 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
NBY15_RS25015 (75351) 75351..75917 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
NBY15_RS25020 (75904) 75904..76632 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
NBY15_RS25025 (76632) 76632..78059 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
NBY15_RS25030 (78049) 78049..78639 + 591 WP_001376242.1 conjugal transfer pilus-stabilizing protein TraP -
NBY15_RS25035 (78626) 78626..78823 + 198 WP_001324648.1 conjugal transfer protein TrbD -
NBY15_RS25040 (78835) 78835..79086 + 252 WP_001038342.1 conjugal transfer protein TrbG -
NBY15_RS25045 (79083) 79083..79598 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
NBY15_RS25050 (79733) 79733..79954 + 222 WP_001278689.1 conjugal transfer protein TraR -
NBY15_RS25055 (80114) 80114..82741 + 2628 WP_001064245.1 type IV secretion system protein TraC -
NBY15_RS25060 (82738) 82738..83124 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
NBY15_RS25065 (83121) 83121..83753 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
NBY15_RS25070 (83750) 83750..84742 + 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
NBY15_RS25075 (84751) 84751..85389 + 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
NBY15_RS25080 (85386) 85386..87194 + 1809 WP_000821841.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
NBY15_RS25085 (87221) 87221..87478 + 258 WP_000864318.1 conjugal transfer protein TrbE -
NBY15_RS25090 (87471) 87471..88214 + 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
NBY15_RS25095 (88230) 88230..88577 + 348 WP_001287910.1 conjugal transfer protein TrbA -
NBY15_RS25100 (88579) 88579..88893 - 315 WP_001324103.1 hypothetical protein -
NBY15_RS25105 (88974) 88974..89258 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
NBY15_RS25110 (89245) 89245..89790 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
NBY15_RS25115 (89720) 89720..90061 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
NBY15_RS25120 (90048) 90048..90428 + 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
NBY15_RS25125 (90428) 90428..91801 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
NBY15_RS25130 (91798) 91798..94624 + 2827 Protein_116 conjugal transfer mating-pair stabilization protein TraG -
NBY15_RS25135 (94640) 94640..95137 + 498 WP_000605857.1 entry exclusion protein -
NBY15_RS25140 (95169) 95169..95900 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
NBY15_RS25145 (96153) 96153..98306 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
NBY15_RS25150 (98315) 98315..98713 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
NBY15_RS25155 (98713) 98713..98940 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB -
NBY15_RS25160 (99022) 99022..104292 + 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
NBY15_RS25165 (104312) 104312..105058 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
NBY15_RS25170 (105117) 105117..105977 + 861 WP_000704514.1 Quorum-quenching protein AidA VF
NBY15_RS25175 (106080) 106080..106640 + 561 WP_000139315.1 fertility inhibition protein FinO -
NBY15_RS25180 (106776) 106776..106988 + 213 WP_001299730.1 ANR family transcriptional regulator -
NBY15_RS25185 (107234) 107234..107308 + 75 Protein_127 endonuclease -
- (107564) 107564..107625 - 62 NuclAT_1 - Antitoxin Detail
- (107564) 107564..107625 - 62 NuclAT_1 - Antitoxin Detail
- (107564) 107564..107625 - 62 NuclAT_1 - Antitoxin Detail
- (107564) 107564..107625 - 62 NuclAT_1 - Antitoxin Detail
NBY15_RS25190 (107669) 107669..107818 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
NBY15_RS25195 (108102) 108102..108359 + 258 WP_000083845.1 replication regulatory protein RepA -
NBY15_RS25200 (108376) 108376..108627 - 252 WP_223195197.1 replication protein RepA -
NBY15_RS25205 (108618) 108618..108665 + 48 WP_229471593.1 hypothetical protein -
NBY15_RS25210 (108658) 108658..109140 + 483 WP_001273588.1 hypothetical protein -
NBY15_RS25215 (109133) 109133..109990 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
NBY15_RS25220 (110929) 110929..111582 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
NBY15_RS25225 (111675) 111675..111932 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
NBY15_RS25230 (111865) 111865..112266 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
NBY15_RS25235 (112551) 112551..113861 + 1311 WP_001262765.1 DUF262 domain-containing protein -
NBY15_RS25240 (113890) 113890..113988 + 99 Protein_138 IS1 family transposase -
NBY15_RS25245 (114138) 114138..114998 - 861 WP_000027057.1 Beta-lactamase TEM ARG
NBY15_RS25250 (115130) 115130..115834 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
NBY15_RS25255 (115883) 115883..116788 - 906 Protein_141 IS4 family transposase IS10R Transposase
NBY15_RS25260 (116931) 116931..117791 + 861 WP_000557454.1 SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
NBY15_RS25265 (117804) 117804..118346 + 543 WP_000587837.1 AAA family ATPase -
NBY15_RS25270 (118828) 118828..119019 - 192 WP_000951934.1 hypothetical protein -
NBY15_RS25275 (119043) 119043..119270 + 228 WP_000248278.1 hypothetical protein -
NBY15_RS25280 (119321) 119321..120457 + 1137 WP_000080860.1 DUF3883 domain-containing protein -
NBY15_RS25285 (120572) 120572..121835 + 1264 Protein_147 IS1182 family transposase ISCfr1 Transposase
NBY15_RS25290 (121900) 121900..122604 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
NBY15_RS25295 (122772) 122772..123191 - 420 WP_000802909.1 plasmid stabilization protein StbA -
NBY15_RS25300 (123840) 123840..124130 + 291 WP_200493316.1 traK protein -
NBY15_RS25305 (124132) 124132..125661 + 1530 WP_000342688.1 type IV secretion system DNA-binding domain-containing protein -
NBY15_RS25310 (125661) 125661..128891 + 3231 WP_000884351.1 ATP-dependent RecD-like DNA helicase Relaxase
NBY15_RS25315 (128891) 128891..129517 + 627 WP_000434930.1 hypothetical protein -
NBY15_RS25320 (129581) 129581..129772 + 192 Protein_154 IS1380 family transposase -
NBY15_RS25325 (130022) 130022..130897 + 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
NBY15_RS25330 (130932) 130932..131900 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
NBY15_RS25335 (131957) 131957..133054 + 1098 Protein_157 TonB-dependent receptor -
NBY15_RS25340 (133122) 133122..133658 - 537 Protein_158 PAS domain-containing protein -
NBY15_RS25345 (133923) 133923..134384 + 462 Protein_159 Tn3 family transposase TnpR_TnAs2 Transposase
NBY15_RS25350 (134437) 134437..135141 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NBY15_RS25355 (135204) 135204..137794 + 2591 Protein_161 salmochelin/enterobactin export ABC transporter IroC -
NBY15_RS25360 (137898) 137898..139126 + 1229 Protein_162 Enterochelin esterase VF
NBY15_RS25365 (139210) 139210..140161 + 952 Protein_163 Ferri-bacillibactin esterase BesA VF
NBY15_RS25370 (140206) 140206..142380 - 2175 WP_250844308.1 Ferric enterobactin receptor VF
NBY15_RS25375 (143257) 143257..143391 - 135 WP_249531455.1 hypothetical protein -
NBY15_RS25385 (144167) 144167..144241 - 75 Protein_167 colicin -
NBY15_RS25390 (144219) 144219..144455 - 237 WP_014640552.1 colicin V immunity protein -
NBY15_RS25395 (144727) 144727..145839 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
NBY15_RS25400 (146347) 146347..146550 - 204 Protein_170 hypothetical protein -
NBY15_RS25405 (146723) 146723..146890 + 168 Protein_171 colicin-B -
NBY15_RS25410 (146908) 146908..147435 - 528 WP_000203272.1 colicin B immunity protein -
NBY15_RS25415 (147679) 147679..148494 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
NBY15_RS25420 (148544) 148544..148897 - 354 WP_000864812.1 colicin M immunity protein -
NBY15_RS25425 (149075) 149075..149866 - 792 WP_000016493.1 site-specific integrase -
NBY15_RS25430 (149863) 149863..150552 - 690 WP_000796228.1 hypothetical protein -
NBY15_RS25435 (150596) 150596..150946 - 351 WP_000493379.1 hypothetical protein -
NBY15_RS25440 (151517) 151517..151777 + 261 WP_000343102.1 hypothetical protein -
NBY15_RS25445 (151774) 151774..152364 + 591 WP_000194555.1 hypothetical protein -
NBY15_RS25450 (152382) 152382..152729 - 348 WP_000142424.1 DUF6404 family protein -
NBY15_RS25455 (152848) 152848..153195 + 348 WP_000762580.1 colicin E1 family microcin immunity protein -
NBY15_RS25460 (153213) 153213..155093 - 1881 WP_001283356.1 colicin Ia central receptor-binding domain-containing protein -
NBY15_RS25465 (155372) 155372..156718 - 1347 WP_001132019.1 protein YagA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance