MGE detailed information
MGE type: Genomic_island MGE length: 20354 bp
Accession: NZ_CP098214 Location: 3860030..3880383 Organism: Escherichia coli strain Z0117EC0036 Replicon: chromosome
Accession: NZ_CP098214 Location: 3860030..3880383 Organism: Escherichia coli strain Z0117EC0036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY15_RS18940 (3855396) | 3855396..3855854 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| NBY15_RS18945 (3856115) | 3856115..3857572 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| NBY15_RS18950 (3857629) | 3857629..3858243 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| NBY15_RS18955 (3858240) | 3858240..3859379 | - | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| NBY15_RS18960 (3859568) | 3859568..3860020 | - | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| NBY15_RS18965 (3860030) | 3860030..3860428 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NBY15_RS18970 (3860431) | 3860431..3860724 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NBY15_RS18975 (3860776) | 3860776..3861831 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| NBY15_RS18980 (3861902) | 3861902..3862687 | - | 786 | WP_000207578.1 | Chemotaxis protein LafU | VF |
| NBY15_RS18985 (3862659) | 3862659..3864371 | + | 1713 | Protein_3727 | Flagellar biosynthesis protein FlhA | VF |
| NBY15_RS18990 (3864450) | 3864450..3864695 | + | 246 | WP_133258463.1 | hypothetical protein | - |
| NBY15_RS18995 (3864690) | 3864690..3865187 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| NBY15_RS19000 (3865363) | 3865363..3866112 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| NBY15_RS19005 (3866424) | 3866424..3867164 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NBY15_RS19010 (3867135) | 3867135..3867902 | - | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| NBY15_RS19015 (3868107) | 3868107..3868685 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NBY15_RS19020 (3868925) | 3868925..3871369 | + | 2445 | WP_000973136.1 | Acyl-coenzyme A dehydrogenase | VF |
| NBY15_RS19025 (3871412) | 3871412..3871858 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NBY15_RS19030 (3872039) | 3872039..3872809 | + | 771 | WP_001118054.1 | 2-oxoglutaramate amidase | - |
| NBY15_RS19035 (3872860) | 3872860..3873054 | - | 195 | Protein_3737 | ISAs1 family transposase | - |
| NBY15_RS19040 (3873080) | 3873080..3873568 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| NBY15_RS19045 (3873662) | 3873662..3874165 | - | 504 | WP_000227714.1 | hypothetical protein | - |
| NBY15_RS19050 (3874394) | 3874394..3875158 | - | 765 | Protein_3740 | ISAs1 family transposase ISEc1 | Transposase |
| NBY15_RS19055 (3875416) | 3875416..3875706 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| NBY15_RS19060 (3875681) | 3875681..3877120 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| NBY15_RS19065 (3877113) | 3877113..3878159 | - | 1047 | WP_021560783.1 | DUF2169 domain-containing protein | - |
| NBY15_RS19070 (3878266) | 3878266..3880248 | - | 1983 | WP_021560784.1 | Actin cross-linking toxin VgrG1 | VF |
| NBY15_RS19075 (3880469) | 3880469..3880987 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| NBY15_RS19080 (3881693) | 3881693..3882196 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| NBY15_RS19085 (3882219) | 3882219..3883703 | + | 1485 | WP_021560785.1 | type VI secretion system contractile sheath large subunit | - |
| NBY15_RS19090 (3883708) | 3883708..3884133 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|