MGE detailed information
MGE type: Prophage MGE length: 15812 bp
Accession: NZ_CP098201 Location: 2930125..2945936 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Accession: NZ_CP098201 Location: 2930125..2945936 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY20_RS14210 () | 2925565..2926938 | + | 1374 | WP_001551227.1 | MFS transporter | - |
| NBY20_RS14215 () | 2926984..2927865 | - | 882 | WP_000984517.1 | protease HtpX | - |
| NBY20_RS14220 () | 2928057..2930105 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| NBY20_RS14225 () | 2930125..2930823 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| NBY20_RS14230 () | 2930920..2931417 | - | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| NBY20_RS14235 () | 2931547..2932830 | + | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| NBY20_RS14240 () | 2932799..2935432 | + | 2634 | WP_001306757.1 | Intermembrane transport protein YebT | VF |
| NBY20_RS14245 () | 2935512..2936951 | + | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NBY20_RS14250 () | 2937069..2937305 | + | 237 | WP_001295499.1 | YebV family protein | - |
| NBY20_RS14255 () | 2937410..2937601 | + | 192 | WP_001296140.1 | YebW family protein | - |
| NBY20_RS14260 () | 2937602..2938258 | - | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| - | 2938355..2938626 | + | 272 | - | - | Antitoxin Detail |
| - | 2938393..2938496 | - | 104 | - | - | Toxin Detail |
| NBY20_RS14265 () | 2938654..2938995 | - | 342 | WP_000976472.1 | YebY family protein | - |
| NBY20_RS14270 () | 2939008..2939880 | - | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| NBY20_RS14275 () | 2939884..2940258 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| NBY20_RS14280 () | 2940397..2940627 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| NBY20_RS14285 () | 2940729..2941385 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| NBY20_RS14290 () | 2941409..2942071 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| NBY20_RS14295 () | 2942068..2944128 | - | 2061 | WP_001551233.1 | oligopeptidase B | - |
| NBY20_RS14300 () | 2944285..2944710 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NBY20_RS14305 () | 2944767..2945936 | + | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NBY20_RS14310 () | 2946100..2946759 | - | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| NBY20_RS14315 () | 2947086..2947442 | - | 357 | WP_001295500.1 | protein YebF | - |
| NBY20_RS14320 () | 2947509..2947799 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| NBY20_RS14325 () | 2947933..2949111 | + | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NBY20_RS14330 () | 2949166..2949807 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|