MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP098178 Location: 4165407..4177194 Organism: Escherichia coli strain Z0117EC0148 Replicon: chromosome
Accession: NZ_CP098178 Location: 4165407..4177194 Organism: Escherichia coli strain Z0117EC0148 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY28_RS20285 (4161732) | 4161732..4162940 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| NBY28_RS20290 (4162966) | 4162966..4164297 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| NBY28_RS20295 (4164319) | 4164319..4165308 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NBY28_RS20300 (4165407) | 4165407..4166345 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NBY28_RS20305 (4166660) | 4166660..4166878 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| NBY28_RS20310 (4167134) | 4167134..4167673 | + | 540 | WP_000675746.1 | protein YhaB | - |
| NBY28_RS20315 (4167695) | 4167695..4168882 | + | 1188 | WP_000484578.1 | YhaC family protein | - |
| NBY28_RS20325 (4170018) | 4170018..4171163 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| NBY28_RS20330 (4171260) | 4171260..4172150 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NBY28_RS20335 (4172180) | 4172180..4172950 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NBY28_RS20340 (4172966) | 4172966..4174300 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NBY28_RS20345 (4174675) | 4174675..4176246 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| NBY28_RS20350 (4176395) | 4176395..4176730 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NBY28_RS20355 (4176730) | 4176730..4177194 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NBY28_RS20360 (4177249) | 4177249..4178058 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NBY28_RS20365 (4178307) | 4178307..4179587 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NBY28_RS20370 (4179610) | 4179610..4180083 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NBY28_RS20375 (4180094) | 4180094..4180873 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NBY28_RS20380 (4180863) | 4180863..4181741 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NBY28_RS20385 (4181759) | 4181759..4182193 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|