MGE detailed information
MGE type: Prophage MGE length: 53653 bp
Accession: NZ_CP097529 Location: 4377506..4431158 Organism: Pseudomonas putida strain KT2440 isolate pSEVA631 Replicon: chromosome
Accession: NZ_CP097529 Location: 4377506..4431158 Organism: Pseudomonas putida strain KT2440 isolate pSEVA631 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8Z99_RS20185 (M8Z99_20155) | 4372847..4374817 | + | 1971 | WP_061405675.1 | calcium-binding protein | - |
| M8Z99_RS20190 (M8Z99_20160) | 4374896..4375141 | - | 246 | WP_049587960.1 | hypothetical protein | - |
| M8Z99_RS20195 (M8Z99_20165) | 4375138..4375431 | - | 294 | WP_049587959.1 | hypothetical protein | - |
| M8Z99_RS20200 (M8Z99_20170) | 4375505..4375729 | - | 225 | WP_049587957.1 | hypothetical protein | - |
| M8Z99_RS20205 (M8Z99_20175) | 4375944..4377431 | - | 1488 | WP_061405677.1 | sialidase family protein | - |
| M8Z99_RS20210 (M8Z99_20180) | 4377506..4378036 | - | 531 | WP_049587950.1 | DUF2514 domain-containing protein | - |
| M8Z99_RS20215 (M8Z99_20185) | 4378033..4378572 | - | 540 | WP_010954681.1 | glycoside hydrolase family 104 protein | - |
| M8Z99_RS20220 (M8Z99_20190) | 4378661..4379029 | + | 369 | WP_061405678.1 | YceK/YidQ family lipoprotein | - |
| M8Z99_RS20225 (M8Z99_20195) | 4378974..4379198 | - | 225 | WP_010954682.1 | hypothetical protein | - |
| M8Z99_RS20230 (M8Z99_20200) | 4379621..4380385 | - | 765 | WP_010954683.1 | hypothetical protein | - |
| M8Z99_RS20235 (M8Z99_20205) | 4380397..4382649 | - | 2253 | WP_010954684.1 | hypothetical protein | - |
| M8Z99_RS20240 (M8Z99_20210) | 4382717..4382908 | - | 192 | WP_049587948.1 | hypothetical protein | - |
| M8Z99_RS20245 (M8Z99_20215) | 4382911..4383714 | - | 804 | WP_010954685.1 | tail protein | - |
| M8Z99_RS20250 (M8Z99_20220) | 4383717..4384361 | - | 645 | WP_010954686.1 | YmfQ family protein | - |
| M8Z99_RS20255 (M8Z99_20225) | 4384352..4385395 | - | 1044 | WP_010954687.1 | baseplate J/gp47 family protein | - |
| M8Z99_RS20260 (M8Z99_20230) | 4385385..4385771 | - | 387 | WP_010954688.1 | phage GP46 family protein | - |
| M8Z99_RS20265 (M8Z99_20235) | 4385768..4386268 | - | 501 | WP_010954689.1 | phage baseplate assembly protein V | - |
| M8Z99_RS20270 (M8Z99_20240) | 4386277..4387386 | - | 1110 | WP_010954690.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| M8Z99_RS20275 (M8Z99_20245) | 4387390..4388652 | - | 1263 | WP_010954691.1 | DNA circularization N-terminal domain-containing protein | - |
| M8Z99_RS20280 (M8Z99_20250) | 4388645..4390600 | - | 1956 | WP_010954692.1 | phage tail tape measure protein | - |
| M8Z99_RS20285 (M8Z99_20255) | 4390593..4390784 | - | 192 | WP_061405679.1 | hypothetical protein | - |
| M8Z99_RS20290 (M8Z99_20260) | 4390730..4391026 | - | 297 | WP_049587943.1 | phage tail assembly protein | - |
| M8Z99_RS20295 (M8Z99_20265) | 4391023..4391370 | - | 348 | WP_049587942.1 | phage tail tube protein | - |
| M8Z99_RS20300 (M8Z99_20270) | 4391453..4392874 | - | 1422 | WP_010951893.1 | group II intron reverse transcriptase/maturase | - |
| M8Z99_RS20305 (M8Z99_20275) | 4393344..4394831 | - | 1488 | WP_010954695.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M8Z99_RS20310 (M8Z99_20280) | 4394831..4395034 | - | 204 | WP_010954696.1 | DUF2635 domain-containing protein | - |
| M8Z99_RS20315 (M8Z99_20285) | 4395040..4395633 | - | 594 | WP_049587778.1 | hypothetical protein | - |
| M8Z99_RS20320 (M8Z99_20290) | 4395663..4396178 | - | 516 | WP_010954699.1 | hypothetical protein | - |
| M8Z99_RS20325 (M8Z99_20295) | 4396171..4396545 | - | 375 | WP_010954700.1 | head-tail adaptor protein | - |
| M8Z99_RS20330 (M8Z99_20300) | 4396548..4397063 | - | 516 | WP_172835030.1 | hypothetical protein | - |
| M8Z99_RS20335 (M8Z99_20305) | 4397102..4397350 | - | 249 | WP_110771832.1 | hypothetical protein | - |
| M8Z99_RS20340 (M8Z99_20310) | 4397403..4398716 | - | 1314 | WP_049587776.1 | phage major capsid protein | - |
| M8Z99_RS20345 (M8Z99_20315) | 4398778..4399749 | - | 972 | WP_010954704.1 | S49 family peptidase | - |
| M8Z99_RS20350 (M8Z99_20320) | 4399746..4401017 | - | 1272 | WP_010954705.1 | phage portal protein | - |
| M8Z99_RS20355 (M8Z99_20325) | 4401020..4401208 | - | 189 | WP_010954706.1 | hypothetical protein | - |
| M8Z99_RS20360 (M8Z99_20330) | 4401205..4403013 | - | 1809 | WP_010954707.1 | terminase large subunit | - |
| M8Z99_RS20365 (M8Z99_20335) | 4402973..4403281 | - | 309 | WP_235436916.1 | phage terminase small subunit P27 family | - |
| M8Z99_RS20370 (M8Z99_20340) | 4403576..4403896 | - | 321 | WP_010954709.1 | HNH endonuclease | - |
| M8Z99_RS20375 (M8Z99_20345) | 4403900..4404223 | - | 324 | WP_010954710.1 | phage holin, lambda family | - |
| M8Z99_RS20380 (M8Z99_20350) | 4404382..4405011 | + | 630 | WP_061405680.1 | hypothetical protein | - |
| M8Z99_RS20385 (M8Z99_20355) | 4405160..4405420 | - | 261 | WP_010954712.1 | hypothetical protein | - |
| M8Z99_RS20390 (M8Z99_20360) | 4405404..4406075 | - | 672 | WP_010954713.1 | hypothetical protein | - |
| M8Z99_RS20395 (M8Z99_20365) | 4406088..4406369 | - | 282 | WP_235436917.1 | hypothetical protein | - |
| M8Z99_RS20400 (M8Z99_20370) | 4406405..4407703 | - | 1299 | WP_010954715.1 | hypothetical protein ; Integrase | Integrase |
| M8Z99_RS20405 (M8Z99_20375) | 4407700..4408128 | - | 429 | WP_049587773.1 | VRR-NUC domain-containing protein | - |
| M8Z99_RS20410 (M8Z99_20380) | 4408125..4408295 | - | 171 | WP_154070660.1 | hypothetical protein | - |
| M8Z99_RS20415 (M8Z99_20385) | 4408292..4408588 | - | 297 | WP_010954717.1 | DUF1364 domain-containing protein | - |
| M8Z99_RS20420 (M8Z99_20390) | 4408570..4408776 | - | 207 | WP_010954718.1 | hypothetical protein | - |
| M8Z99_RS20425 (M8Z99_20395) | 4408776..4410173 | - | 1398 | WP_010954719.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| M8Z99_RS20430 (M8Z99_20400) | 4410170..4411000 | - | 831 | WP_010954720.1 | replication protein | - |
| M8Z99_RS20435 (M8Z99_20405) | 4411325..4411537 | - | 213 | WP_010954721.1 | YdaS family helix-turn-helix protein | - |
| M8Z99_RS20440 (M8Z99_20410) | 4411625..4412272 | + | 648 | WP_010954722.1 | S24 family peptidase | - |
| M8Z99_RS20445 (M8Z99_20415) | 4412330..4412743 | + | 414 | WP_010954723.1 | HIRAN domain-containing protein | - |
| M8Z99_RS20450 (M8Z99_20420) | 4412787..4413023 | + | 237 | WP_010954724.1 | hypothetical protein | - |
| M8Z99_RS20455 (M8Z99_20425) | 4413190..4414182 | + | 993 | WP_049587768.1 | hypothetical protein | - |
| M8Z99_RS20460 (M8Z99_20430) | 4414185..4414751 | + | 567 | WP_049587766.1 | hypothetical protein | - |
| M8Z99_RS20465 (M8Z99_20435) | 4414919..4415260 | - | 342 | WP_049587764.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| M8Z99_RS20470 (M8Z99_20440) | 4415260..4415508 | - | 249 | WP_010954726.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| M8Z99_RS20475 (M8Z99_20445) | 4415658..4415918 | + | 261 | WP_010954727.1 | DUF1654 domain-containing protein | - |
| M8Z99_RS20480 (M8Z99_20450) | 4416290..4416499 | + | 210 | WP_049587762.1 | hypothetical protein | - |
| M8Z99_RS20485 (M8Z99_20455) | 4417136..4417519 | + | 384 | WP_049587761.1 | helix-turn-helix transcriptional regulator | - |
| M8Z99_RS20490 (M8Z99_20460) | 4417539..4417808 | + | 270 | WP_010954732.1 | hypothetical protein | - |
| M8Z99_RS20495 (M8Z99_20465) | 4417805..4418263 | + | 459 | WP_010954733.1 | hypothetical protein | - |
| M8Z99_RS20500 (M8Z99_20470) | 4418345..4418695 | + | 351 | WP_010954734.1 | hypothetical protein | - |
| M8Z99_RS20505 (M8Z99_20475) | 4418709..4418987 | - | 279 | WP_010954735.1 | hypothetical protein | - |
| M8Z99_RS20510 (M8Z99_20480) | 4419094..4419645 | + | 552 | WP_049587760.1 | hypothetical protein | - |
| M8Z99_RS20515 (M8Z99_20485) | 4419660..4420043 | + | 384 | WP_010954737.1 | hypothetical protein | - |
| M8Z99_RS20520 (M8Z99_20490) | 4420111..4421772 | + | 1662 | WP_010954738.1 | DNA cytosine methyltransferase | - |
| M8Z99_RS20525 (M8Z99_20495) | 4421781..4422458 | + | 678 | WP_049587756.1 | hypothetical protein | - |
| M8Z99_RS20530 (M8Z99_20500) | 4422508..4422807 | - | 300 | WP_049587754.1 | hypothetical protein | - |
| M8Z99_RS20535 (M8Z99_20505) | 4422973..4423356 | + | 384 | WP_010954740.1 | hypothetical protein | - |
| M8Z99_RS20540 (M8Z99_20510) | 4423353..4423631 | + | 279 | WP_049587751.1 | hypothetical protein | - |
| M8Z99_RS20545 (M8Z99_20515) | 4423628..4423951 | + | 324 | WP_010954741.1 | hypothetical protein | - |
| M8Z99_RS20550 (M8Z99_20520) | 4423948..4424340 | + | 393 | WP_010954742.1 | DUF2591 domain-containing protein | - |
| M8Z99_RS20555 (M8Z99_20525) | 4424530..4424802 | - | 273 | WP_049587750.1 | hypothetical protein | - |
| M8Z99_RS20560 (M8Z99_20530) | 4425623..4425940 | + | 318 | WP_049587747.1 | hypothetical protein | - |
| M8Z99_RS20565 (M8Z99_20535) | 4425980..4426225 | + | 246 | WP_010954745.1 | DUF4224 domain-containing protein | - |
| M8Z99_RS20570 (M8Z99_20540) | 4426227..4427276 | + | 1050 | WP_010954746.1 | hypothetical protein ; Integrase | Integrase |
| M8Z99_RS20580 (M8Z99_20550) | 4427606..4428625 | - | 1020 | WP_010954747.1 | protease SohB | - |
| M8Z99_RS20585 (M8Z99_20555) | 4428823..4429533 | + | 711 | WP_010954748.1 | histidine phosphatase family protein | - |
| M8Z99_RS20590 (M8Z99_20560) | 4429590..4429907 | + | 318 | WP_003251077.1 | SCP2 sterol-binding domain-containing protein | - |
| M8Z99_RS20595 (M8Z99_20565) | 4430091..4431158 | + | 1068 | WP_010954749.1 | phosphotransferase family protein | - |
| M8Z99_RS20600 (M8Z99_20570) | 4431195..4431962 | + | 768 | WP_003251082.1 | SDR family oxidoreductase | - |
| M8Z99_RS20605 (M8Z99_20575) | 4431963..4432784 | - | 822 | WP_003251085.1 | class I SAM-dependent methyltransferase | - |
| M8Z99_RS20610 (M8Z99_20580) | 4432954..4433304 | - | 351 | WP_012051882.1 | hypothetical protein | - |
| M8Z99_RS20615 (M8Z99_20585) | 4433422..4433712 | + | 291 | WP_010954750.1 | RcnB family protein | - |
| M8Z99_RS20620 (M8Z99_20590) | 4433956..4434141 | + | 186 | WP_004577263.1 | hypothetical protein | - |
| M8Z99_RS20625 (M8Z99_20595) | 4434215..4434607 | + | 393 | WP_010954752.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA20007 | AE015451 | 4377646..4431298 | 0 | |
| Pseudomonas putida KT2440 | Prophage | TA20570 | NC_002947 | 4377646..4431298 | 0 |