MGE detailed information
MGE type: Conjugative plasmid MGE length: 72021 bp
Accession: NZ_CP095528 Location: 1..72021 Organism: Escherichia coli strain GN05505 Replicon: plasmid p5505-2
Accession: NZ_CP095528 Location: 1..72021 Organism: Escherichia coli strain GN05505 Replicon: plasmid p5505-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW395_RS26155 (43) | 43..342 | - | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MW395_RS26160 (332) | 332..595 | - | 264 | WP_001089473.1 | hypothetical protein | - |
| MW395_RS26165 (615) | 615..752 | - | 138 | Protein_2 | XRE family transcriptional regulator | - |
| MW395_RS26170 (1665) | 1665..2522 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| MW395_RS26175 (2515) | 2515..2589 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MW395_RS26180 (2825) | 2825..3082 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| MW395_RS26185 (3367) | 3367..3516 | - | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| - (3564) | 3564..3620 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (3564) | 3564..3620 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (3564) | 3564..3620 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (3564) | 3564..3620 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| MW395_RS26190 (3715) | 3715..4152 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| MW395_RS26195 (4305) | 4305..4523 | - | 219 | WP_023150739.1 | hypothetical protein | - |
| MW395_RS26200 (4792) | 4792..5253 | - | 462 | WP_019842128.1 | thermonuclease family protein | - |
| MW395_RS26205 (5995) | 5995..6198 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| MW395_RS26210 (6350) | 6350..6907 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| MW395_RS26215 (6962) | 6962..7708 | - | 747 | WP_019842127.1 | conjugal transfer pilus acetylase TraX | - |
| MW395_RS26220 (7728) | 7728..12998 | - | 5271 | WP_039719944.1 | Multifunctional conjugation protein TraI | Relaxase |
| MW395_RS26225 (12998) | 12998..15241 | - | 2244 | WP_077534916.1 | type IV conjugative transfer system coupling protein TraD | - |
| MW395_RS26230 (15292) | 15292..16029 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| MW395_RS26235 (16232) | 16232..16963 | - | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| MW395_RS26240 (16977) | 16977..17486 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| MW395_RS26245 (17483) | 17483..20308 | - | 2826 | WP_039719946.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MW395_RS26250 (20305) | 20305..21680 | - | 1376 | Protein_19 | conjugal transfer protein TraH | - |
| MW395_RS26255 (21667) | 21667..22059 | - | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| MW395_RS26260 (22040) | 22040..22387 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| MW395_RS26265 (22317) | 22317..22862 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MW395_RS26270 (22849) | 22849..23133 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MW395_RS26275 (23214) | 23214..23549 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| MW395_RS26280 (23530) | 23530..23871 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| MW395_RS26285 (23885) | 23885..24628 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MW395_RS26290 (24621) | 24621..24878 | - | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| MW395_RS26295 (24905) | 24905..26755 | - | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MW395_RS26300 (26752) | 26752..27390 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MW395_RS26305 (27399) | 27399..27704 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| MW395_RS26310 (27734) | 27734..28726 | - | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| MW395_RS26315 (28723) | 28723..29355 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MW395_RS26320 (29352) | 29352..29738 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MW395_RS26325 (29735) | 29735..32365 | - | 2631 | WP_032152342.1 | type IV secretion system protein TraC | - |
| MW395_RS26330 (32491) | 32491..32838 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| MW395_RS26335 (32866) | 32866..33084 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| MW395_RS26340 (33164) | 33164..33641 | - | 478 | Protein_37 | hypothetical protein | - |
| MW395_RS26345 (33634) | 33634..33855 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| MW395_RS26350 (33990) | 33990..34505 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MW395_RS26355 (34505) | 34505..34822 | - | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| MW395_RS26360 (34809) | 34809..35375 | - | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MW395_RS26365 (35365) | 35365..36816 | - | 1452 | WP_000146663.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MW395_RS26370 (36816) | 36816..37544 | - | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| MW395_RS26375 (37531) | 37531..38097 | - | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| MW395_RS26380 (38119) | 38119..38430 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| MW395_RS26385 (38445) | 38445..38804 | - | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| MW395_RS26390 (38837) | 38837..39238 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| MW395_RS26395 (39331) | 39331..40020 | - | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| MW395_RS26400 (40207) | 40207..40590 | - | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MW395_RS26405 (40911) | 40911..41513 | + | 603 | Protein_50 | hypothetical protein | VF |
| MW395_RS26410 (41810) | 41810..42631 | - | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| MW395_RS26415 (42742) | 42742..43038 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| MW395_RS26420 (43338) | 43338..43635 | + | 298 | Protein_53 | hypothetical protein | - |
| MW395_RS26425 (43954) | 43954..44079 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MW395_RS26430 (44021) | 44021..44170 | - | 150 | Protein_55 | plasmid maintenance protein Mok | - |
| - (44156) | 44156..44380 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (44156) | 44156..44380 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (44156) | 44156..44380 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (44156) | 44156..44380 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| MW395_RS26435 (44349) | 44349..45111 | - | 763 | Protein_56 | plasmid SOS inhibition protein A | - |
| MW395_RS26440 (45108) | 45108..45542 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| MW395_RS26445 (45611) | 45611..47575 | - | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| MW395_RS26450 (47636) | 47636..47869 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| MW395_RS26455 (47927) | 47927..48454 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| MW395_RS26460 (48756) | 48756..49199 | + | 444 | Protein_61 | hypothetical protein | - |
| MW395_RS26465 (49285) | 49285..49848 | - | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| MW395_RS26470 (49895) | 49895..51256 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| MW395_RS26475 (51308) | 51308..51538 | - | 231 | WP_000218644.1 | hypothetical protein | - |
| MW395_RS26480 (52056) | 52056..52527 | + | 472 | Protein_65 | hypothetical protein | - |
| MW395_RS26485 (52506) | 52506..52697 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| MW395_RS26490 (52697) | 52697..53116 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| MW395_RS26495 (53163) | 53163..53588 | - | 426 | WP_001198915.1 | antirestriction protein | - |
| MW395_RS26500 (54004) | 54004..54774 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| MW395_RS26505 (54819) | 54819..55337 | - | 519 | WP_227910476.1 | DUF1380 family protein | - |
| MW395_RS26510 (55267) | 55267..55488 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| MW395_RS26515 (55489) | 55489..56172 | - | 684 | WP_000086169.1 | DNA methylase | - |
| MW395_RS26520 (56248) | 56248..56559 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| MW395_RS26525 (56556) | 56556..57458 | - | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| MW395_RS26530 (57553) | 57553..57846 | - | 294 | WP_002430945.1 | hypothetical protein | - |
| MW395_RS26535 (57994) | 57994..58956 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| MW395_RS26540 (58959) | 58959..59309 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| MW395_RS26545 (59712) | 59712..60164 | - | 453 | WP_000670962.1 | acyltransferase | - |
| MW395_RS26550 (60694) | 60694..60903 | + | 210 | WP_001535752.1 | microcin B17 family TOMM | - |
| MW395_RS26555 (60963) | 60963..61817 | + | 855 | WP_016235969.1 | McbB family protein | - |
| MW395_RS26560 (61819) | 61819..62637 | + | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| MW395_RS26565 (62669) | 62669..63808 | + | 1140 | WP_224223109.1 | YcaO-like family protein | - |
| MW395_RS26570 (63818) | 63818..64543 | + | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| MW395_RS26575 (64540) | 64540..65271 | + | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| MW395_RS26580 (65275) | 65275..65838 | + | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| MW395_RS26585 (66406) | 66406..69411 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MW395_RS26590 (69575) | 69575..70132 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MW395_RS26595 (70315) | 70315..71175 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MW395_RS26600 (71366) | 71366..72021 | + | 656 | WP_268101554.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|