MGE detailed information
MGE type: Prophage MGE length: 66013 bp
Accession: NZ_CP091604 Location: 1984809..2050821 Organism: Salmonella enterica strain 1902 Replicon: chromosome
Accession: NZ_CP091604 Location: 1984809..2050821 Organism: Salmonella enterica strain 1902 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5514_RS09475 () | 1980546..1980998 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| L5514_RS09480 () | 1981028..1981768 | + | 741 | WP_061380270.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| L5514_RS09485 () | 1981805..1982326 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| L5514_RS09490 () | 1982328..1982927 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| L5514_RS09495 () | 1983137..1983829 | + | 693 | WP_058820964.1 | hypothetical protein | - |
| L5514_RS09500 () | 1984189..1984800 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| L5514_RS09505 () | 1984809..1985819 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| L5514_RS09510 () | 1985898..1986683 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| L5514_RS09515 () | 1986680..1987435 | - | 756 | WP_133322679.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| L5514_RS09520 () | 1987514..1988458 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| L5514_RS09525 () | 1988474..1989793 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| L5514_RS09530 () | 1989910..1990881 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| L5514_RS09535 () | 1990954..1992396 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| L5514_RS09540 () | 1992520..1993389 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| L5514_RS09545 () | 1993731..1995206 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| L5514_RS09550 () | 1995441..1997252 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| L5514_RS09555 () | 1997290..1997931 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| L5514_RS09560 () | 1998031..1999209 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| L5514_RS09565 () | 1999340..1999630 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| L5514_RS09570 () | 1999698..2000051 | + | 354 | WP_001042119.1 | protein YebF | - |
| L5514_RS09575 () | 2000145..2000804 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| L5514_RS09580 () | 2001017..2003068 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| L5514_RS09585 () | 2003105..2003803 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| L5514_RS09590 () | 2003827..2004483 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| L5514_RS09595 () | 2004591..2004821 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| L5514_RS09600 () | 2004959..2005333 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| L5514_RS09605 () | 2005334..2006209 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| L5514_RS09610 () | 2006226..2006579 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 2006681..2006824 | - | 144 | - | - | Antitoxin Detail |
| - | 2006719..2006822 | + | 104 | - | - | Toxin Detail |
| L5514_RS09615 () | 2006953..2007603 | - | 651 | Protein_1878 | hypothetical protein ; Integrase | Integrase |
| L5514_RS09620 () | 2007614..2007919 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| L5514_RS09625 () | 2007876..2008079 | + | 204 | Protein_1880 | phage tail protein | - |
| L5514_RS09630 () | 2008251..2008406 | + | 156 | Protein_1881 | phage tail protein | - |
| L5514_RS09635 () | 2008512..2008844 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| L5514_RS09640 () | 2008893..2009002 | + | 110 | Protein_1883 | tail fiber assembly protein | - |
| L5514_RS09645 () | 2009093..2009278 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| L5514_RS09650 () | 2009530..2009718 | - | 189 | Protein_1885 | tail fiber assembly protein | - |
| L5514_RS09655 () | 2009714..2010484 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| L5514_RS09660 () | 2010554..2010652 | + | 99 | Protein_1887 | DUF4113 domain-containing protein | - |
| L5514_RS09665 () | 2010975..2011103 | + | 129 | Protein_1888 | helix-turn-helix domain-containing protein | - |
| L5514_RS09670 () | 2011132..2011932 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| L5514_RS09675 () | 2012872..2013180 | - | 309 | Protein_1890 | hypothetical protein ; Integrase | Integrase |
| L5514_RS09680 () | 2013179..2013543 | - | 365 | Protein_1891 | recombinase RecT | - |
| L5514_RS09685 () | 2013540..2013650 | + | 111 | Protein_1892 | replication protein | - |
| L5514_RS09690 () | 2013665..2014060 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| L5514_RS09695 () | 2014347..2015477 | - | 1131 | WP_126524016.1 | GGDEF domain-containing protein | - |
| L5514_RS09700 () | 2015873..2017852 | + | 1980 | WP_133322681.1 | alkyl sulfatase dimerization domain-containing protein | - |
| L5514_RS09705 () | 2018261..2018875 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| L5514_RS09710 () | 2018885..2019043 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| L5514_RS09715 () | 2019176..2020090 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| L5514_RS09720 () | 2021346..2021759 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| L5514_RS09725 () | 2021883..2023091 | + | 1209 | Protein_1900 | IS256 family transposase ISEc39 | Transposase |
| L5514_RS09730 () | 2023237..2023377 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| L5514_RS09735 () | 2023546..2023812 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| L5514_RS09740 () | 2024182..2024601 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| L5514_RS09745 () | 2024837..2024995 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| L5514_RS09750 () | 2025019..2025267 | + | 249 | Protein_1905 | glycosyltransferase | - |
| L5514_RS09755 () | 2025312..2025839 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| L5514_RS09760 () | 2026817..2027555 | - | 739 | Protein_1907 | hypothetical protein ; Integrase | Integrase |
| L5514_RS09765 () | 2027674..2028687 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| L5514_RS09770 () | 2029384..2029587 | - | 204 | WP_024798203.1 | hypothetical protein | VF |
| L5514_RS09775 () | 2029771..2030016 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| L5514_RS09780 () | 2031645..2032121 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| L5514_RS09785 () | 2032450..2032845 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| L5514_RS09790 () | 2033633..2034355 | + | 723 | WP_126524018.1 | hypothetical protein | VF |
| L5514_RS09795 () | 2034640..2034804 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| L5514_RS09800 () | 2035028..2035678 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| L5514_RS09805 () | 2035697..2035888 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| L5514_RS09810 () | 2035999..2036235 | - | 237 | WP_024131167.1 | YebV family protein | - |
| L5514_RS09815 () | 2036353..2037792 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| L5514_RS09820 () | 2037870..2040503 | - | 2634 | WP_001747692.1 | hypothetical protein | VF |
| L5514_RS09825 () | 2040472..2041755 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| L5514_RS09830 () | 2041884..2042381 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| L5514_RS09835 () | 2042479..2043165 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| L5514_RS09840 () | 2043185..2045233 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| L5514_RS09845 () | 2045427..2046308 | + | 882 | WP_000984498.1 | protease HtpX | - |
| L5514_RS09850 () | 2046356..2047729 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| L5514_RS09855 () | 2047906..2048697 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| L5514_RS09860 () | 2048909..2049148 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| L5514_RS09865 () | 2049306..2049449 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| L5514_RS09870 () | 2049520..2049807 | + | 288 | WP_001000660.1 | YebO family protein | - |
| L5514_RS09875 () | 2050456..2050599 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| L5514_RS09880 () | 2050612..2050821 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| L5514_RS09885 () | 2051041..2052786 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| L5514_RS09890 () | 2052852..2053661 | + | 810 | WP_000010924.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| L5514_RS09895 () | 2053658..2054224 | - | 567 | WP_126524021.1 | manganese efflux pump MntP | - |
| L5514_RS09900 () | 2054634..2055092 | - | 459 | WP_126524022.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|