MGE detailed information
MGE type: Prophage MGE length: 56643 bp
Accession: NZ_CP091125 Location: 1274885..1331527 Organism: Serratia marcescens strain CM2015_854 Replicon: chromosome
Accession: NZ_CP091125 Location: 1274885..1331527 Organism: Serratia marcescens strain CM2015_854 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2D47_RS06270 (L2D47_06270) | 1270161..1271006 | + | 846 | WP_038881209.1 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase | - |
| L2D47_RS06275 (L2D47_06275) | 1271147..1271659 | + | 513 | WP_038881146.1 | serine protease inhibitor ecotin | - |
| L2D47_RS06280 (L2D47_06280) | 1271715..1272620 | - | 906 | WP_053056821.1 | LysR family transcriptional regulator | - |
| L2D47_RS06285 (L2D47_06285) | 1272679..1273848 | + | 1170 | WP_151272594.1 | four-carbon acid sugar kinase family protein | - |
| L2D47_RS06290 (L2D47_06290) | 1273845..1274846 | + | 1002 | WP_048233216.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| L2D47_RS06295 (L2D47_06295) | 1274885..1275577 | + | 693 | WP_047728007.1 | 4-hydroxythreonine-4-phosphate dehydrogenase | - |
| L2D47_RS06300 (L2D47_06300) | 1275762..1276112 | + | 351 | WP_134267038.1 | hypothetical protein | - |
| L2D47_RS06305 (L2D47_06305) | 1276494..1277969 | + | 1476 | WP_055313581.1 | hypothetical protein | - |
| L2D47_RS06310 (L2D47_06310) | 1277966..1278709 | + | 744 | WP_055313579.1 | ankyrin repeat domain-containing protein | - |
| L2D47_RS06315 (L2D47_06315) | 1279111..1280151 | - | 1041 | WP_055313851.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| L2D47_RS06320 (L2D47_06320) | 1280225..1281214 | - | 990 | WP_201621467.1 | hypothetical protein | - |
| L2D47_RS06325 (L2D47_06325) | 1281245..1281817 | - | 573 | WP_071890367.1 | phage repressor protein CI | - |
| L2D47_RS06330 (L2D47_06330) | 1281958..1282188 | + | 231 | WP_071890369.1 | regulator | - |
| L2D47_RS06335 (L2D47_06335) | 1282218..1282727 | + | 510 | WP_055312640.1 | phage regulatory CII family protein | - |
| L2D47_RS06340 (L2D47_06340) | 1282738..1282917 | + | 180 | WP_071890377.1 | DUF2724 domain-containing protein | - |
| L2D47_RS06345 (L2D47_06345) | 1282929..1283231 | + | 303 | WP_055312643.1 | hypothetical protein | - |
| L2D47_RS06350 (L2D47_06350) | 1283295..1283588 | + | 294 | WP_085819519.1 | DUF2732 family protein | - |
| L2D47_RS06355 (L2D47_06355) | 1283588..1283812 | + | 225 | WP_055312639.1 | TraR/DksA C4-type zinc finger protein | - |
| L2D47_RS06360 (L2D47_06360) | 1283935..1284216 | + | 282 | WP_055312638.1 | DUF5405 family protein | - |
| L2D47_RS06365 (L2D47_06365) | 1284213..1286429 | + | 2217 | WP_055312637.1 | replication endonuclease | - |
| L2D47_RS06370 (L2D47_06370) | 1286510..1286692 | + | 183 | WP_085819361.1 | hypothetical protein | - |
| L2D47_RS06375 (L2D47_06375) | 1286913..1287398 | + | 486 | WP_055312635.1 | GNAT family N-acetyltransferase | - |
| L2D47_RS06380 (L2D47_06380) | 1287920..1288174 | + | 255 | WP_071605322.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| L2D47_RS06385 (L2D47_06385) | 1288171..1288515 | + | 345 | WP_223294898.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| L2D47_RS06390 (L2D47_06390) | 1288560..1289594 | - | 1035 | WP_055312634.1 | phage portal protein | - |
| L2D47_RS06395 (L2D47_06395) | 1289594..1291366 | - | 1773 | WP_055312633.1 | terminase ATPase subunit family protein | - |
| L2D47_RS06400 (L2D47_06400) | 1291509..1292324 | + | 816 | WP_055312632.1 | GPO family capsid scaffolding protein | - |
| L2D47_RS06405 (L2D47_06405) | 1292367..1293578 | + | 1212 | WP_055312631.1 | phage major capsid protein, P2 family | - |
| L2D47_RS06410 (L2D47_06410) | 1293581..1294240 | + | 660 | WP_055312630.1 | terminase endonuclease subunit | - |
| L2D47_RS06415 (L2D47_06415) | 1294334..1294822 | + | 489 | WP_055312629.1 | head completion/stabilization protein | - |
| L2D47_RS06420 (L2D47_06420) | 1294822..1295025 | + | 204 | WP_015379118.1 | tail protein X | - |
| L2D47_RS06425 (L2D47_06425) | 1295030..1295239 | + | 210 | WP_031231709.1 | HP1 family phage holin | - |
| L2D47_RS06430 (L2D47_06430) | 1295223..1295735 | + | 513 | WP_055312628.1 | lysozyme | - |
| L2D47_RS06435 (L2D47_06435) | 1295732..1296160 | + | 429 | WP_055312627.1 | Rz-like lysis system protein LysB | - |
| L2D47_RS06440 (L2D47_06440) | 1296054..1296284 | + | 231 | WP_230199994.1 | Rz1-like lysis system protein LysC | - |
| L2D47_RS06445 (L2D47_06445) | 1296256..1296729 | + | 474 | WP_055312626.1 | phage tail protein | - |
| L2D47_RS06450 (L2D47_06450) | 1296716..1297177 | + | 462 | WP_055312625.1 | phage virion morphogenesis protein | - |
| L2D47_RS06455 (L2D47_06455) | 1297167..1297907 | + | 741 | WP_065764042.1 | hypothetical protein | - |
| L2D47_RS06460 (L2D47_06460) | 1297993..1298622 | + | 630 | WP_055312623.1 | phage baseplate assembly protein V | - |
| L2D47_RS06465 (L2D47_06465) | 1298619..1298969 | + | 351 | WP_033639346.1 | GPW/gp25 family protein | - |
| L2D47_RS06470 (L2D47_06470) | 1298974..1299882 | + | 909 | WP_055312622.1 | baseplate assembly protein | - |
| L2D47_RS06475 (L2D47_06475) | 1299875..1300408 | + | 534 | WP_055312621.1 | phage tail protein I | - |
| L2D47_RS06480 (L2D47_06480) | 1300418..1303300 | + | 2883 | WP_055312620.1 | phage tail protein | - |
| L2D47_RS06485 (L2D47_06485) | 1303297..1303728 | + | 432 | WP_085819360.1 | tail fiber assembly protein | - |
| L2D47_RS06490 (L2D47_06490) | 1304003..1305172 | + | 1170 | WP_055312619.1 | phage tail sheath protein | - |
| L2D47_RS06495 (L2D47_06495) | 1305187..1305696 | + | 510 | WP_023447563.1 | phage major tail tube protein | - |
| L2D47_RS06500 (L2D47_06500) | 1305751..1306032 | + | 282 | WP_055312618.1 | phage tail assembly protein | - |
| L2D47_RS06505 (L2D47_06505) | 1306065..1306187 | + | 123 | WP_023456045.1 | GpE family phage tail protein | - |
| L2D47_RS06510 (L2D47_06510) | 1306180..1309005 | + | 2826 | WP_055312617.1 | phage tail tape measure protein | - |
| L2D47_RS06515 (L2D47_06515) | 1309010..1309495 | + | 486 | WP_015379102.1 | phage tail protein | - |
| L2D47_RS06520 (L2D47_06520) | 1309492..1310640 | + | 1149 | WP_055312616.1 | phage late control D family protein | - |
| L2D47_RS06525 (L2D47_06525) | 1310740..1310958 | + | 219 | WP_071890375.1 | DNA-binding transcriptional regulator | - |
| L2D47_RS06530 (L2D47_06530) | 1311252..1312940 | - | 1689 | WP_047728000.1 | aspartate:alanine antiporter | - |
| L2D47_RS06535 (L2D47_06535) | 1313234..1313623 | + | 390 | WP_033637808.1 | inner membrane protein YbjM | - |
| L2D47_RS06540 (L2D47_06540) | 1313669..1313932 | - | 264 | WP_004938676.1 | GrxA family glutaredoxin | - |
| L2D47_RS06545 (L2D47_06545) | 1314163..1314465 | + | 303 | WP_033646672.1 | YbjC family protein | - |
| L2D47_RS06550 (L2D47_06550) | 1314522..1315424 | + | 903 | WP_038880682.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| L2D47_RS06555 (L2D47_06555) | 1315561..1316040 | + | 480 | WP_004938666.1 | YbjN domain-containing protein | - |
| L2D47_RS06560 (L2D47_06560) | 1316447..1317556 | + | 1110 | WP_038880683.1 | spermidine/putrescine ABC transporter substrate-binding protein PotF | - |
| L2D47_RS06565 (L2D47_06565) | 1317678..1318811 | + | 1134 | WP_055313607.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| L2D47_RS06570 (L2D47_06570) | 1318836..1319798 | + | 963 | WP_038880685.1 | Putrescine transport system permease protein PotH | VF |
| L2D47_RS06575 (L2D47_06575) | 1319795..1320640 | + | 846 | WP_016928360.1 | putrescine ABC transporter permease PotI | - |
| L2D47_RS06580 (L2D47_06580) | 1320745..1321224 | + | 480 | WP_047727995.1 | YbjO family protein | - |
| L2D47_RS06585 (L2D47_06585) | 1321294..1322424 | + | 1131 | WP_055313608.1 | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | - |
| L2D47_RS06590 (L2D47_06590) | 1322457..1323191 | - | 735 | WP_055313609.1 | arginine ABC transporter substrate-binding protein | - |
| L2D47_RS06595 (L2D47_06595) | 1323244..1323606 | - | 363 | WP_055313610.1 | hypothetical protein | - |
| L2D47_RS06600 (L2D47_06600) | 1323493..1324659 | + | 1167 | WP_236582491.1 | ISL3 family transposase ISAba43 | Transposase |
| L2D47_RS06605 (L2D47_06605) | 1324709..1325377 | - | 669 | WP_038880694.1 | arginine ABC transporter permease ArtM | - |
| L2D47_RS06610 (L2D47_06610) | 1325377..1326093 | - | 717 | WP_025159684.1 | arginine ABC transporter permease ArtQ | - |
| L2D47_RS06615 (L2D47_06615) | 1326103..1326834 | - | 732 | WP_004928409.1 | arginine ABC transporter substrate-binding protein | - |
| L2D47_RS06620 (L2D47_06620) | 1326867..1327595 | - | 729 | WP_038884338.1 | Arginine transport ATP-binding protein ArtP | VF |
| L2D47_RS06625 (L2D47_06625) | 1327860..1328402 | - | 543 | WP_038880698.1 | lipoprotein | - |
| L2D47_RS06630 (L2D47_06630) | 1328563..1328886 | + | 324 | WP_004928400.1 | heavy metal-binding domain-containing protein | - |
| L2D47_RS06635 (L2D47_06635) | 1328935..1330503 | - | 1569 | WP_055311978.1 | DUF3300 domain-containing protein | - |
| L2D47_RS06640 (L2D47_06640) | 1330691..1331527 | + | 837 | WP_055311983.1 | N-acetylmuramoyl-L-alanine amidase | - |
| L2D47_RS06645 (L2D47_06645) | 1331528..1332538 | - | 1011 | WP_004928393.1 | NAD(P)-dependent oxidoreductase | - |
| L2D47_RS06650 (L2D47_06650) | 1332697..1334136 | - | 1440 | WP_055311985.1 | DUF2867 domain-containing protein | - |
| L2D47_RS06655 (L2D47_06655) | 1334288..1334635 | + | 348 | WP_038880711.1 | DUF1294 domain-containing protein | - |
| L2D47_RS06660 (L2D47_06660) | 1334636..1335463 | - | 828 | WP_038880714.1 | MurR/RpiR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|