MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 48959 bp
Accession: NZ_CP090582 Location: 1..48959 Organism: Methylobacterium radiotolerans strain NYY1 Replicon: plasmid pNYY1_3
Accession: NZ_CP090582 Location: 1..48959 Organism: Methylobacterium radiotolerans strain NYY1 Replicon: plasmid pNYY1_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ599_RS31390 (LZ599_31390) | 895..1119 | - | 225 | WP_234742467.1 | hypothetical protein | - |
| LZ599_RS31395 (LZ599_31395) | 1522..1791 | - | 270 | WP_234742468.1 | hypothetical protein | - |
| LZ599_RS31400 (LZ599_31400) | 1902..2087 | - | 186 | WP_234742469.1 | hypothetical protein | - |
| LZ599_RS32745 | 2137..2271 | - | 135 | WP_268821260.1 | hypothetical protein | - |
| LZ599_RS31405 (LZ599_31405) | 2280..2459 | - | 180 | WP_234742470.1 | hypothetical protein | - |
| LZ599_RS31410 (LZ599_31410) | 2483..2650 | - | 168 | WP_234742471.1 | hypothetical protein | - |
| LZ599_RS31415 (LZ599_31415) | 2714..3145 | - | 432 | WP_234742472.1 | CBS domain-containing protein | - |
| LZ599_RS31420 (LZ599_31420) | 3429..3674 | + | 246 | WP_234742473.1 | hypothetical protein | - |
| LZ599_RS31425 (LZ599_31425) | 4051..4221 | + | 171 | WP_234742474.1 | DUF3606 domain-containing protein | - |
| LZ599_RS31430 (LZ599_31430) | 4452..4601 | + | 150 | WP_234742475.1 | hypothetical protein | - |
| LZ599_RS31435 (LZ599_31435) | 4667..4840 | + | 174 | Protein_11 | IS630 family transposase ISMdi20 | Transposase |
| LZ599_RS31440 (LZ599_31440) | 4879..6147 | - | 1269 | WP_234742476.1 | IS256 family transposase ISMra3 | Transposase |
| LZ599_RS31445 (LZ599_31445) | 6254..7020 | + | 767 | Protein_13 | IS630 family transposase ISMex30 | Transposase |
| LZ599_RS31450 (LZ599_31450) | 7034..7360 | - | 327 | Protein_14 | Tellurite resistance protein TerB | - |
| LZ599_RS31455 (LZ599_31455) | 7618..8226 | + | 609 | WP_234742477.1 | anti-sigma factor | - |
| LZ599_RS31460 (LZ599_31460) | 8653..9327 | - | 675 | WP_234742478.1 | ferritin-like domain-containing protein | - |
| LZ599_RS31465 (LZ599_31465) | 9366..10073 | - | 708 | WP_234742479.1 | ferritin-like domain-containing protein | - |
| LZ599_RS31470 (LZ599_31470) | 10382..10618 | + | 237 | WP_234742480.1 | hypothetical protein | - |
| LZ599_RS31475 (LZ599_31475) | 10695..11582 | + | 888 | WP_234742481.1 | cytochrome b/b6 domain-containing protein | - |
| LZ599_RS31480 (LZ599_31480) | 11579..12505 | + | 927 | WP_234742482.1 | molybdopterin-binding protein | - |
| LZ599_RS31485 (LZ599_31485) | 12781..13569 | + | 789 | WP_234742483.1 | alpha/beta fold hydrolase | - |
| LZ599_RS31490 (LZ599_31490) | 13968..14711 | + | 744 | WP_234742489.1 | Crp/Fnr family transcriptional regulator | - |
| LZ599_RS31495 (LZ599_31495) | 14782..15033 | - | 252 | WP_234742484.1 | hypothetical protein | - |
| LZ599_RS31500 (LZ599_31500) | 15639..15839 | + | 201 | WP_234742485.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LZ599_RS31505 (LZ599_31505) | 15869..18289 | + | 2421 | WP_234742490.1 | PAS domain-containing protein | - |
| LZ599_RS31510 (LZ599_31510) | 18442..19251 | - | 810 | WP_234741656.1 | IS5 family transposase ISMdi26 | Transposase |
| LZ599_RS31515 (LZ599_31515) | 19904..21283 | - | 1380 | WP_234742486.1 | HD-GYP domain-containing protein | - |
| LZ599_RS31520 (LZ599_31520) | 21428..21571 | - | 144 | Protein_28 | tyrosine-type recombinase/integrase | - |
| LZ599_RS31525 (LZ599_31525) | 21843..22250 | + | 408 | WP_234742487.1 | response regulator | - |
| LZ599_RS31530 (LZ599_31530) | 22360..22569 | - | 210 | WP_234742488.1 | hypothetical protein | - |
| LZ599_RS31535 (LZ599_31535) | 23046..25892 | + | 2847 | WP_234742491.1 | PAS domain S-box protein | - |
| LZ599_RS31540 (LZ599_31540) | 26086..27204 | + | 1119 | WP_234742445.1 | HWE histidine kinase domain-containing protein | - |
| LZ599_RS31545 (LZ599_31545) | 27225..27653 | + | 429 | WP_234742446.1 | response regulator | - |
| LZ599_RS31550 (LZ599_31550) | 27793..28419 | + | 627 | WP_234742447.1 | PepSY domain-containing protein | - |
| LZ599_RS31555 (LZ599_31555) | 28523..29236 | + | 714 | WP_234742448.1 | sigma-70 family RNA polymerase sigma factor | - |
| LZ599_RS31560 (LZ599_31560) | 29261..30430 | - | 1170 | WP_234742449.1 | permease | - |
| LZ599_RS31565 (LZ599_31565) | 30658..31272 | - | 615 | Protein_37 | ParA family protein | - |
| LZ599_RS31570 (LZ599_31570) | 31869..32027 | - | 159 | WP_234742450.1 | hypothetical protein | - |
| LZ599_RS31575 (LZ599_31575) | 32513..33298 | + | 786 | WP_234742451.1 | hypothetical protein | - |
| LZ599_RS31580 (LZ599_31580) | 33649..34119 | + | 471 | WP_234742452.1 | hypothetical protein | - |
| LZ599_RS31585 (LZ599_31585) | 34879..35034 | - | 156 | WP_234742453.1 | hypothetical protein | - |
| LZ599_RS31590 (LZ599_31590) | 35256..35867 | - | 612 | WP_234742492.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LZ599_RS31595 (LZ599_31595) | 36022..37464 | - | 1443 | WP_234742454.1 | restriction endonuclease | - |
| LZ599_RS31600 (LZ599_31600) | 37703..38236 | + | 534 | WP_234742455.1 | hypothetical protein | - |
| LZ599_RS31605 (LZ599_31605) | 38553..38900 | - | 348 | WP_234742456.1 | hypothetical protein | - |
| LZ599_RS31610 (LZ599_31610) | 38900..39550 | - | 651 | WP_029360218.1 | ParA family protein | - |
| LZ599_RS31615 (LZ599_31615) | 39831..40100 | + | 270 | WP_029360219.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| LZ599_RS31620 (LZ599_31620) | 40093..40383 | + | 291 | WP_234742457.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ599_RS31625 (LZ599_31625) | 40877..41692 | + | 816 | WP_234742458.1 | helix-turn-helix domain-containing protein | - |
| LZ599_RS31630 (LZ599_31630) | 41867..42088 | + | 222 | WP_234742459.1 | hypothetical protein | - |
| LZ599_RS31635 (LZ599_31635) | 42387..42620 | + | 234 | WP_234742460.1 | hypothetical protein | - |
| LZ599_RS31640 (LZ599_31640) | 42653..43165 | - | 513 | WP_234742461.1 | ProQ/FINO family protein | - |
| LZ599_RS31645 (LZ599_31645) | 43464..43898 | + | 435 | WP_234742462.1 | MucR family transcriptional regulator | - |
| LZ599_RS31650 (LZ599_31650) | 45511..45711 | - | 201 | WP_091928315.1 | hypothetical protein | - |
| LZ599_RS31655 (LZ599_31655) | 45943..46839 | + | 897 | WP_234742463.1 | 3'-5' exonuclease | - |
| LZ599_RS31660 (LZ599_31660) | 47442..47867 | + | 426 | WP_234742464.1 | hypothetical protein | - |
| LZ599_RS31665 (LZ599_31665) | 48074..48541 | + | 468 | WP_234742465.1 | MucR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|