MGE detailed information
MGE type: Prophage MGE length: 46730 bp
Accession: NZ_CP090316 Location: 952522..999251 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Accession: NZ_CP090316 Location: 952522..999251 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD23_RS04355 (IUD23_04355) | 948545..949666 | + | 1122 | WP_011098075.1 | prephenate dehydrogenase | - |
| IUD23_RS04360 (IUD23_04360) | 950146..950859 | + | 714 | WP_004085858.1 | response regulator transcription factor | - |
| IUD23_RS04365 (IUD23_04365) | 951153..951533 | + | 381 | WP_004085860.1 | diacylglycerol kinase | - |
| IUD23_RS04370 (IUD23_04370) | 951620..952525 | + | 906 | WP_038228385.1 | prolipoprotein diacylglyceryl transferase | - |
| IUD23_RS04375 (IUD23_04375) | 952522..953316 | + | 795 | WP_011098074.1 | thymidylate synthase | - |
| IUD23_RS04380 (IUD23_04380) | 953425..953925 | + | 501 | WP_038228387.1 | dihydrofolate reductase | - |
| IUD23_RS04385 (IUD23_04385) | 954124..955665 | + | 1542 | WP_038228237.1 | alpha/beta hydrolase | - |
| IUD23_RS04390 (IUD23_04390) | 955662..956408 | + | 747 | WP_004091068.1 | hypothetical protein | VF |
| IUD23_RS04395 (IUD23_04395) | 956405..957589 | + | 1185 | WP_038228239.1 | ABC transporter permease | - |
| IUD23_RS04400 (IUD23_04400) | 957616..958731 | - | 1116 | WP_038228241.1 | energy transducer TonB | - |
| IUD23_RS04405 (IUD23_04405) | 959392..960480 | + | 1089 | WP_038228242.1 | phosphoserine transaminase | - |
| IUD23_RS04410 (IUD23_04410) | 960560..961684 | + | 1125 | WP_004091077.1 | prephenate dehydratase | - |
| IUD23_RS04415 (IUD23_04415) | 961773..963101 | + | 1329 | WP_027700452.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| IUD23_RS04420 (IUD23_04420) | 963879..964073 | + | 195 | WP_234056417.1 | hypothetical protein | - |
| IUD23_RS04425 (IUD23_04425) | 964824..965096 | - | 273 | WP_038228245.1 | hypothetical protein | - |
| IUD23_RS04430 (IUD23_04430) | 965204..965341 | - | 138 | WP_155266596.1 | hypothetical protein | - |
| IUD23_RS04435 (IUD23_04435) | 965442..965732 | - | 291 | WP_225624603.1 | hypothetical protein | - |
| IUD23_RS04440 (IUD23_04440) | 965776..966438 | - | 663 | WP_196242995.1 | hypothetical protein | - |
| IUD23_RS04445 (IUD23_04445) | 966440..966817 | - | 378 | WP_230577719.1 | baseplate J/gp47 family protein | - |
| IUD23_RS04450 (IUD23_04450) | 967439..968044 | - | 606 | WP_040123201.1 | hypothetical protein | VF |
| IUD23_RS04455 (IUD23_04455) | 968050..968424 | - | 375 | WP_040123200.1 | hypothetical protein | - |
| IUD23_RS04460 (IUD23_04460) | 968571..968825 | + | 255 | WP_040123199.1 | hypothetical protein | - |
| IUD23_RS04465 (IUD23_04465) | 968822..969724 | + | 903 | WP_234056418.1 | YdaU family protein | - |
| IUD23_RS04470 (IUD23_04470) | 969705..970394 | + | 690 | WP_038228265.1 | hypothetical protein | - |
| IUD23_RS04475 (IUD23_04475) | 970391..970852 | + | 462 | WP_234056374.1 | hypothetical protein | - |
| IUD23_RS04480 (IUD23_04480) | 970981..971679 | + | 699 | WP_038228267.1 | hypothetical protein | - |
| IUD23_RS04485 (IUD23_04485) | 971732..971986 | + | 255 | WP_038228269.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IUD23_RS04490 (IUD23_04490) | 971983..972318 | + | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IUD23_RS04495 (IUD23_04495) | 972498..972797 | - | 300 | WP_004089519.1 | HigA family addiction module antitoxin | - |
| IUD23_RS04500 (IUD23_04500) | 972807..973088 | - | 282 | WP_011098058.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUD23_RS04505 (IUD23_04505) | 973436..974150 | + | 715 | Protein_880 | site-specific DNA-methyltransferase | - |
| IUD23_RS04510 (IUD23_04510) | 974137..974601 | - | 465 | WP_011098056.1 | hypothetical protein | VF |
| IUD23_RS04515 (IUD23_04515) | 974598..975371 | - | 774 | WP_004089528.1 | hypothetical protein | VF |
| IUD23_RS04520 (IUD23_04520) | 975806..976717 | + | 912 | WP_230577717.1 | iron-sulfur cluster carrier protein ApbC | - |
| IUD23_RS04525 (IUD23_04525) | 976813..978147 | - | 1335 | WP_038228275.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| IUD23_RS04530 (IUD23_04530) | 978279..978982 | - | 704 | Protein_885 | IS6 family transposase ISEas1 | Transposase |
| IUD23_RS04535 (IUD23_04535) | 978982..979233 | + | 252 | WP_230577716.1 | DUF2913 family protein | - |
| IUD23_RS04540 (IUD23_04540) | 979505..979888 | + | 384 | WP_004089538.1 | VOC family protein | - |
| IUD23_RS04545 (IUD23_04545) | 980452..981456 | - | 1005 | WP_004089540.1 | porphobilinogen synthase | - |
| IUD23_RS04550 (IUD23_04550) | 982061..982558 | + | 498 | WP_011098052.1 | hypothetical protein | - |
| IUD23_RS04555 (IUD23_04555) | 982767..983225 | + | 459 | WP_080679646.1 | hypothetical protein | - |
| IUD23_RS04565 (IUD23_04565) | 983976..984605 | - | 630 | WP_004089556.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IUD23_RS04570 (IUD23_04570) | 984602..986467 | - | 1866 | WP_038228283.1 | excinuclease ABC subunit UvrC | - |
| IUD23_RS04575 (IUD23_04575) | 986624..986839 | - | 216 | WP_228446145.1 | hypothetical protein | - |
| IUD23_RS04580 (IUD23_04580) | 987153..987884 | + | 732 | WP_234056419.1 | site-specific DNA-methyltransferase | - |
| IUD23_RS04585 (IUD23_04585) | 987983..988369 | + | 387 | Protein_895 | lysozyme | - |
| IUD23_RS04590 (IUD23_04590) | 988289..989146 | - | 858 | WP_230577724.1 | DNA polymerase | - |
| IUD23_RS04595 (IUD23_04595) | 989526..989693 | + | 168 | WP_230577715.1 | hypothetical protein | - |
| IUD23_RS12215 | 989690..989836 | + | 147 | WP_230577714.1 | DUF4224 domain-containing protein | - |
| IUD23_RS04600 (IUD23_04600) | 989808..989999 | + | 192 | WP_230577713.1 | DUF4224 domain-containing protein | - |
| IUD23_RS04605 (IUD23_04605) | 990050..990712 | + | 663 | WP_230577712.1 | hypothetical protein ; Integrase | Integrase |
| IUD23_RS04610 (IUD23_04610) | 990738..991043 | + | 306 | WP_234056420.1 | hypothetical protein ; Integrase | Integrase |
| IUD23_RS04615 (IUD23_04615) | 991320..992015 | - | 696 | WP_038228289.1 | energy transducer TonB | - |
| IUD23_RS04620 (IUD23_04620) | 992137..993417 | + | 1281 | WP_020852005.1 | serine--tRNA ligase | - |
| IUD23_RS04625 (IUD23_04625) | 994234..995187 | + | 954 | WP_038228291.1 | MBL fold metallo-hydrolase | - |
| IUD23_RS04630 (IUD23_04630) | 995486..996280 | + | 795 | WP_004088266.1 | hypothetical protein | VF |
| IUD23_RS04635 (IUD23_04635) | 996280..997212 | + | 933 | WP_234056421.1 | ParB/RepB/Spo0J family partition protein | - |
| IUD23_RS04640 (IUD23_04640) | 997519..998490 | + | 972 | WP_038228294.1 | hypothetical protein | VF |
| IUD23_RS04645 (IUD23_04645) | 998529..999251 | + | 723 | WP_234056422.1 | glycosyltransferase | - |
| IUD23_RS04650 (IUD23_04650) | 999269..999577 | + | 309 | WP_012382664.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| IUD23_RS04655 (IUD23_04655) | 999871..1001517 | + | 1647 | WP_038228401.1 | fatty acid CoA ligase family protein | - |
| IUD23_RS04660 (IUD23_04660) | 1001592..1002218 | - | 627 | WP_004088271.1 | nicotinamidase | - |
| IUD23_RS04665 (IUD23_04665) | 1002252..1002962 | - | 711 | WP_038228299.1 | epoxyqueuosine reductase QueH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|