MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089772 Location: 1162323..1174077 Organism: Mycobacterium tuberculosis strain I0003165-3 Replicon: chromosome
Accession: NZ_CP089772 Location: 1162323..1174077 Organism: Mycobacterium tuberculosis strain I0003165-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ67_RS05525 (LVJ67_05520) | 1159258..1159827 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ67_RS05530 (LVJ67_05525) | 1159831..1161360 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ67_RS05535 (LVJ67_05530) | 1161368..1162141 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ67_RS05540 (LVJ67_05535) | 1162323..1163763 | - | 1441 | Protein_1091 | ISNCY family transposase | - |
| LVJ67_RS05545 (LVJ67_05540) | 1163949..1164233 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| LVJ67_RS05550 (LVJ67_05545) | 1164260..1164556 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ67_RS05555 (LVJ67_05550) | 1164702..1165877 | - | 1176 | WP_009938304.1 | PPE family protein PPE15 | VF |
| LVJ67_RS05560 (LVJ67_05555) | 1165954..1166781 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ67_RS05565 (LVJ67_05560) | 1167569..1167808 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ67_RS05570 (LVJ67_05565) | 1167977..1168904 | - | 928 | Protein_1097 | IS5-like element ISMt1 family transposase | - |
| LVJ67_RS05575 (LVJ67_05570) | 1169187..1170212 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ67_RS05580 (LVJ67_05575) | 1170459..1171082 | + | 624 | WP_031697658.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ67_RS05585 (LVJ67_05580) | 1171079..1171960 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ67_RS05590 (LVJ67_05585) | 1172830..1174077 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ67_RS05595 (LVJ67_05590) | 1174445..1175560 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ67_RS05600 (LVJ67_05595) | 1175517..1175720 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ67_RS05605 (LVJ67_05600) | 1175793..1176239 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ67_RS05610 (LVJ67_05605) | 1176288..1177193 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ67_RS05615 (LVJ67_05610) | 1177352..1177531 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ67_RS05620 (LVJ67_05615) | 1177712..1178161 | - | 450 | Protein_1107 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |