MGE detailed information
MGE type: Genomic_island MGE length: 62690 bp
Accession: NZ_CP089445 Location: 4012133..4074822 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Accession: NZ_CP089445 Location: 4012133..4074822 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT922_RS19620 (4007795) | 4007795..4007938 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| LT922_RS19625 (4008199) | 4008199..4012086 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| LT922_RS19630 (4012358) | 4012358..4012618 | + | 261 | Protein_3841 | IS3 family transposase ISSfl10 | Transposase |
| LT922_RS19635 (4012600) | 4012600..4012686 | + | 87 | Protein_3842 | IS3 family transposase ISSfl10 | Transposase |
| LT922_RS19640 (4012683) | 4012683..4013834 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| LT922_RS19645 (4013847) | 4013847..4014737 | + | 891 | Protein_3844 | IS3 family transposase ISSd1 | Transposase |
| LT922_RS19650 (4014755) | 4014755..4015204 | + | 450 | WP_225469291.1 | hypothetical protein | - |
| LT922_RS19655 (4015620) | 4015620..4017002 | + | 1383 | Protein_3846 | IS3 family transposase | - |
| LT922_RS19660 (4017087) | 4017087..4017512 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS19665 (4017509) | 4017509..4017859 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS19670 (4017890) | 4017890..4019503 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS19675 (4019534) | 4019534..4019692 | + | 159 | Protein_3850 | IS3 family transposase | - |
| LT922_RS19680 (4019726) | 4019726..4020235 | - | 510 | Protein_3851 | L-lactate permease | - |
| LT922_RS19685 (4020255) | 4020255..4020577 | + | 323 | Protein_3852 | transposase | - |
| LT922_RS19690 (4021155) | 4021155..4021370 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| LT922_RS19695 (4021374) | 4021374..4021733 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| LT922_RS19700 (4022024) | 4022024..4022266 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| LT922_RS19705 (4022751) | 4022751..4022910 | + | 160 | Protein_3856 | transposase domain-containing protein | - |
| LT922_RS19710 (4023128) | 4023128..4025218 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| LT922_RS19720 (4027098) | 4027098..4028087 | - | 990 | WP_000990138.1 | sialate O-acetylesterase | - |
| LT922_RS19725 (4028184) | 4028184..4028918 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| LT922_RS19730 (4028954) | 4028954..4029877 | - | 924 | WP_001030790.1 | alpha/beta hydrolase | - |
| LT922_RS19735 (4029939) | 4029939..4031048 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| LT922_RS19740 (4031061) | 4031061..4031771 | - | 711 | WP_001296386.1 | oligogalacturonate-specific porin KdgM family protein | - |
| LT922_RS19745 (4031817) | 4031817..4032647 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| LT922_RS19750 (4032651) | 4032651..4034123 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| LT922_RS19755 (4034172) | 4034172..4035047 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| LT922_RS19760 (4035081) | 4035081..4035998 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| LT922_RS19765 (4036116) | 4036116..4036513 | + | 398 | Protein_3868 | transposase domain-containing protein | - |
| LT922_RS19770 (4036659) | 4036659..4037084 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| LT922_RS19775 (4037081) | 4037081..4037431 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| LT922_RS19780 (4037462) | 4037462..4038559 | + | 1098 | Protein_3871 | IS66 family transposase IS682 | Transposase |
| LT922_RS19785 (4038559) | 4038559..4040097 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| LT922_RS19790 (4040136) | 4040136..4040321 | - | 186 | Protein_3873 | putative zinc ribbon protein | - |
| LT922_RS19795 (4040318) | 4040318..4040701 | - | 384 | WP_000271011.1 | putative zinc ribbon protein | - |
| LT922_RS19800 (4040868) | 4040868..4041437 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| LT922_RS19805 (4041636) | 4041636..4041833 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| LT922_RS19810 (4042166) | 4042166..4042345 | - | 180 | Protein_3877 | hemolysin expression modulator Hha | - |
| LT922_RS19815 (4043263) | 4043263..4043469 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| LT922_RS19820 (4043555) | 4043555..4044127 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| LT922_RS19825 (4044248) | 4044248..4045738 | - | 1491 | WP_001305029.1 | YfjI family protein | - |
| LT922_RS19830 (4047070) | 4047070..4047942 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| LT922_RS19835 (4048276) | 4048276..4051398 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| LT922_RS19840 (4051493) | 4051493..4052620 | + | 1128 | Protein_3883 | hypothetical protein | - |
| LT922_RS19845 (4052696) | 4052696..4053151 | + | 456 | WP_000581502.1 | IrmA family protein | - |
| LT922_RS19850 (4053230) | 4053230..4053463 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| LT922_RS19855 (4053564) | 4053564..4054382 | + | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| LT922_RS19860 (4054437) | 4054437..4054922 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| LT922_RS19865 (4054938) | 4054938..4055414 | + | 477 | WP_001186726.1 | RadC family protein | - |
| LT922_RS19870 (4055477) | 4055477..4055698 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| LT922_RS19875 (4055717) | 4055717..4056361 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| LT922_RS19880 (4056411) | 4056411..4056779 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LT922_RS19885 (4056868) | 4056868..4057245 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| LT922_RS19890 (4057242) | 4057242..4057730 | + | 489 | WP_000761699.1 | DUF5983 family protein | - |
| LT922_RS19895 (4057747) | 4057747..4057944 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| LT922_RS19900 (4058029) | 4058029..4058874 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| LT922_RS19905 (4058943) | 4058943..4059338 | + | 396 | WP_000208382.1 | DUF6088 family protein | - |
| LT922_RS19910 (4059331) | 4059331..4060264 | + | 934 | Protein_3897 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LT922_RS19915 (4060681) | 4060681..4060851 | + | 171 | Protein_3898 | IS110 family transposase ISEc32 | Transposase |
| LT922_RS19920 (4061662) | 4061662..4062645 | + | 984 | WP_001296394.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| LT922_RS19925 (4062717) | 4062717..4063865 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| LT922_RS19930 (4063889) | 4063889..4065565 | + | 1677 | WP_001305083.1 | hypothetical protein | VF |
| LT922_RS19935 (4065575) | 4065575..4066315 | + | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| LT922_RS19940 (4066312) | 4066312..4068339 | + | 2028 | WP_021538955.1 | hypothetical protein | VF |
| LT922_RS19945 (4068374) | 4068374..4069567 | + | 1194 | WP_021538956.1 | hypothetical protein | VF |
| LT922_RS19950 (4070112) | 4070112..4070741 | - | 630 | WP_021538957.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| LT922_RS19955 (4070763) | 4070763..4073024 | - | 2262 | WP_021538958.1 | hypothetical protein | - |
| LT922_RS19960 (4073143) | 4073143..4074132 | - | 990 | Protein_3907 | ADP-L-glycero-D-manno-heptose-6-epimerase | VF |
| LT922_RS19965 (4074154) | 4074154..4074822 | - | 669 | WP_000590241.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LT922_RS19970 (4074819) | 4074819..4075595 | - | 777 | WP_000124286.1 | ABC transporter permease | - |
| LT922_RS19975 (4076753) | 4076753..4077331 | - | 579 | WP_021538961.1 | GspM family type II secretion system protein YghD | - |
| LT922_RS19980 (4077333) | 4077333..4078511 | - | 1179 | WP_021538962.1 | type II secretion system protein GspL | - |
| LT922_RS19985 (4078508) | 4078508..4079485 | - | 978 | WP_000633242.1 | type II secretion system minor pseudopilin GspK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|