MGE detailed information
MGE type: Genomic_island MGE length: 49333 bp
Accession: NZ_CP089445 Location: 302377..351709 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Accession: NZ_CP089445 Location: 302377..351709 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT922_RS01370 (299225) | 299225..299944 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| LT922_RS01375 (299941) | 299941..301572 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| LT922_RS01380 (301753) | 301753..301983 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LT922_RS01385 (301995) | 301995..302267 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| LT922_RS01390 (302377) | 302377..304914 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| LT922_RS01395 (304947) | 304947..305639 | - | 693 | WP_000760483.1 | hypothetical protein | VF |
| LT922_RS01400 (305704) | 305704..306228 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| LT922_RS01405 (306629) | 306629..310441 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| LT922_RS01410 (311339) | 311339..312169 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| LT922_RS01415 (313325) | 313325..317254 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| LT922_RS01420 (317468) | 317468..317740 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LT922_RS01425 (317968) | 317968..318264 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LT922_RS01430 (318292) | 318292..318465 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LT922_RS01435 (318584) | 318584..320101 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| LT922_RS01440 (320338) | 320338..321795 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| LT922_RS01445 (321854) | 321854..324001 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| LT922_RS01450 (324081) | 324081..325415 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| LT922_RS01455 (325781) | 325781..327319 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| LT922_RS01460 (327579) | 327579..327738 | - | 160 | Protein_278 | integrase | - |
| LT922_RS01465 (328123) | 328123..329658 | - | 1536 | WP_000492897.1 | hypothetical protein | VF |
| LT922_RS01470 (329729) | 329729..329890 | - | 162 | Protein_280 | DUF4942 domain-containing protein | - |
| LT922_RS01475 (329981) | 329981..331480 | + | 1500 | WP_029700729.1 | IS21 family transposase ISEc10 | Transposase |
| LT922_RS01480 (331477) | 331477..332232 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| LT922_RS01485 (332281) | 332281..332991 | - | 711 | WP_001621817.1 | DUF4942 domain-containing protein | - |
| LT922_RS01490 (333076) | 333076..333273 | - | 198 | WP_000839254.1 | DUF957 domain-containing protein | - |
| LT922_RS01495 (333285) | 333285..333773 | - | 489 | WP_000761714.1 | DUF5983 family protein | - |
| LT922_RS01500 (333770) | 333770..334147 | - | 378 | WP_001094436.1 | TA system toxin CbtA family protein | Toxin Detail |
| LT922_RS01505 (334194) | 334194..334571 | - | 378 | WP_015953067.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LT922_RS01510 (334650) | 334650..334871 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| LT922_RS01515 (334940) | 334940..335416 | - | 477 | WP_001186756.1 | RadC family protein | - |
| LT922_RS01520 (335431) | 335431..335916 | - | 486 | WP_000860054.1 | antirestriction protein | - |
| LT922_RS01525 (336007) | 336007..336825 | - | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| LT922_RS01530 (336915) | 336915..337148 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| LT922_RS01535 (337154) | 337154..337831 | - | 678 | WP_001097312.1 | hypothetical protein | - |
| LT922_RS01540 (337979) | 337979..338659 | - | 681 | WP_001282927.1 | WYL domain-containing protein | - |
| LT922_RS01545 (338862) | 338862..339746 | - | 885 | WP_000010416.1 | 50S ribosome-binding GTPase | - |
| LT922_RS01550 (339852) | 339852..340802 | + | 951 | WP_000157734.1 | hypothetical protein | - |
| LT922_RS01555 (340799) | 340799..341587 | - | 789 | WP_000816188.1 | hypothetical protein | - |
| LT922_RS01560 (341723) | 341723..343336 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS01565 (343367) | 343367..343717 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS01570 (343714) | 343714..344139 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| LT922_RS01575 (345483) | 345483..345731 | - | 249 | WP_000573217.1 | hypothetical protein | - |
| LT922_RS01580 (345836) | 345836..346567 | + | 732 | WP_029700721.1 | inovirus Gp2 family protein | - |
| LT922_RS01585 (346895) | 346895..347773 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| LT922_RS01590 (347829) | 347829..348463 | - | 635 | Protein_304 | IS3 family transposase IS2 | Transposase |
| LT922_RS01595 (348761) | 348761..348877 | + | 117 | Protein_305 | phosphoporin PhoE | - |
| LT922_RS01600 (348879) | 348879..349012 | + | 134 | Protein_306 | phosphate-starvation-inducible protein PsiE | - |
| LT922_RS01605 (349087) | 349087..350538 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| LT922_RS01610 (350531) | 350531..351709 | - | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| LT922_RS01615 (352183) | 352183..353396 | + | 1214 | WP_162880626.1 | IS3 family transposase | - |
| LT922_RS01620 (353620) | 353620..353949 | - | 330 | WP_000481835.1 | multidrug efflux SMR transporter | - |
| LT922_RS01625 (353965) | 353965..354366 | - | 402 | WP_000095890.1 | multidrug efflux SMR transporter | - |
| LT922_RS01630 (354399) | 354399..355064 | - | 666 | WP_000139438.1 | hypothetical protein | - |
| LT922_RS01635 (355076) | 355076..355696 | - | 621 | WP_000564322.1 | phosphate propanoyltransferase | - |
| LT922_RS01640 (355693) | 355693..356157 | - | 465 | WP_001086629.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|