MGE detailed information
MGE type: Prophage MGE length: 87501 bp
Accession: NZ_CP089031 Location: 2612114..2699614 Organism: Escherichia coli strain 7386Nal Replicon: chromosome
Accession: NZ_CP089031 Location: 2612114..2699614 Organism: Escherichia coli strain 7386Nal Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO543_RS13240 () | 2608628..2609374 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CO543_RS13245 () | 2609463..2610149 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| CO543_RS13250 () | 2610326..2610529 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CO543_RS13255 () | 2610565..2612025 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| CO543_RS13260 () | 2612114..2613397 | - | 1284 | Protein_2603 | MHS family MFS transporter YdfJ | - |
| CO543_RS13265 () | 2613529..2613771 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| CO543_RS13270 () | 2613933..2614574 | - | 642 | WP_001143804.1 | hypothetical protein | VF |
| CO543_RS13275 () | 2614656..2615285 | - | 630 | WP_001303500.1 | hypothetical protein | VF |
| CO543_RS13280 () | 2615358..2615933 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| CO543_RS13285 () | 2616047..2616316 | - | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| CO543_RS13290 () | 2616318..2617631 | - | 1314 | WP_000268848.1 | ISNCY family transposase KIS | Transposase |
| CO543_RS13295 () | 2617696..2618295 | - | 600 | WP_001230508.1 | hypothetical protein | VF |
| CO543_RS13300 () | 2618363..2620930 | - | 2568 | Protein_2611 | host specificity protein J | - |
| CO543_RS13305 () | 2620930..2622441 | - | 1512 | Protein_2612 | host specificity protein J | - |
| CO543_RS13310 () | 2622783..2623364 | - | 582 | WP_001089999.1 | tail assembly protein | - |
| CO543_RS13315 () | 2623361..2624104 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| CO543_RS13320 () | 2624115..2624813 | - | 699 | WP_001179510.1 | phage minor tail protein L | - |
| CO543_RS13325 () | 2624813..2625154 | - | 342 | WP_000807954.1 | phage tail protein | - |
| CO543_RS13330 () | 2625147..2628389 | - | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| CO543_RS13335 () | 2628441..2628650 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| CO543_RS13340 () | 2628746..2629120 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| CO543_RS13345 () | 2629126..2629842 | - | 717 | WP_001275508.1 | major tail subunit | - |
| CO543_RS13350 () | 2629901..2630245 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| CO543_RS13355 () | 2630242..2630688 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| CO543_RS13360 () | 2630685..2631035 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| CO543_RS13365 () | 2631045..2631371 | - | 327 | WP_000126026.1 | head-tail connector protein | - |
| CO543_RS13370 () | 2631368..2633466 | - | 2099 | Protein_2625 | phage portal protein | - |
| CO543_RS13375 () | 2633412..2633633 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| CO543_RS13380 () | 2633678..2634274 | - | 597 | Protein_2627 | phage major capsid protein | - |
| CO543_RS13385 () | 2634276..2634584 | - | 309 | Protein_2628 | YdfR family protein | - |
| CO543_RS13390 () | 2634589..2634804 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| CO543_RS13395 () | 2635243..2637093 | - | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| CO543_RS13400 () | 2637070..2637212 | + | 143 | Protein_2631 | hypothetical protein | - |
| CO543_RS13405 () | 2637407..2637574 | - | 168 | WP_000216636.1 | DUF3927 family protein | - |
| CO543_RS13410 () | 2637571..2638002 | - | 432 | WP_001302123.1 | tellurite resistance protein | - |
| CO543_RS13425 () | 2638453..2639166 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| CO543_RS13430 () | 2639302..2639499 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| CO543_RS13435 () | 2639724..2640278 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| CO543_RS13440 () | 2640341..2640646 | - | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CO543_RS13445 () | 2640659..2641708 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| CO543_RS13450 () | 2641710..2641982 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| CO543_RS13455 () | 2642104..2642448 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| CO543_RS13460 () | 2642568..2642723 | - | 156 | WP_000813258.1 | Hok/Gef family protein | Toxin Detail |
| - | 2642735..2642793 | + | 59 | - | - | Antitoxin Detail |
| CO543_RS13465 () | 2643014..2643571 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| CO543_RS13470 () | 2643573..2643791 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| CO543_RS13475 () | 2643919..2644230 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| CO543_RS13480 () | 2644223..2644450 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| CO543_RS13485 () | 2644447..2644728 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| CO543_RS13490 () | 2644761..2645477 | - | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| CO543_RS13495 () | 2645511..2645972 | - | 462 | WP_000139447.1 | replication protein P | - |
| CO543_RS13500 () | 2645965..2647008 | - | 1044 | WP_001262402.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| CO543_RS13505 () | 2647077..2647502 | - | 426 | WP_000693878.1 | toxin YdaT family protein | - |
| CO543_RS13510 () | 2647486..2647728 | - | 243 | WP_000747948.1 | Cro/CI family transcriptional regulator | - |
| CO543_RS13515 () | 2648120..2648458 | + | 339 | WP_001416688.1 | S24 family peptidase | - |
| CO543_RS13520 () | 2648751..2648903 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| CO543_RS13525 () | 2648915..2649553 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| CO543_RS13530 () | 2649554..2649763 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| CO543_RS13535 () | 2650328..2650516 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| CO543_RS13540 () | 2650513..2650701 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| CO543_RS13545 () | 2650794..2652032 | + | 1239 | Protein_2658 | exonuclease | - |
| CO543_RS13550 () | 2652020..2652571 | + | 552 | Protein_2659 | hypothetical protein ; Integrase | Integrase |
| CO543_RS13555 () | 2652749..2652991 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| CO543_RS13560 () | 2653041..2653859 | - | 819 | Protein_2661 | IS256 family transposase IS1414 | Transposase |
| CO543_RS13565 () | 2653954..2654334 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| CO543_RS13570 () | 2654331..2654678 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CO543_RS13575 () | 2654728..2656266 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| CO543_RS13580 () | 2656304..2656699 | - | 396 | Protein_2665 | IS256 family transposase ISEic2 | Transposase |
| CO543_RS13585 () | 2656849..2657499 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| CO543_RS13590 () | 2658210..2658785 | - | 576 | WP_001131642.1 | hypothetical protein | VF |
| CO543_RS13595 () | 2658899..2659168 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| CO543_RS13600 () | 2659170..2660393 | - | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CO543_RS13605 () | 2660458..2661057 | - | 600 | WP_001230508.1 | hypothetical protein | VF |
| CO543_RS13610 () | 2661125..2664603 | - | 3479 | Protein_2671 | host specificity protein J | - |
| CO543_RS13615 () | 2664866..2665228 | - | 363 | Protein_2672 | phage minor tail protein L | - |
| CO543_RS13620 () | 2665228..2665569 | - | 342 | WP_000807954.1 | phage tail protein | - |
| CO543_RS13625 () | 2665562..2668804 | - | 3243 | WP_000212818.1 | phage tail tape measure protein | - |
| CO543_RS13630 () | 2668852..2669061 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| CO543_RS13635 () | 2669157..2669531 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| CO543_RS13640 () | 2669546..2670262 | - | 717 | WP_001275434.1 | major tail subunit | - |
| CO543_RS13645 () | 2670328..2670672 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| CO543_RS13650 () | 2670669..2671115 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| CO543_RS13655 () | 2671112..2671462 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| CO543_RS13660 () | 2671472..2671798 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| CO543_RS13665 () | 2671801..2674380 | - | 2580 | WP_000267295.1 | phage portal protein | - |
| CO543_RS13670 () | 2674326..2674547 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| CO543_RS13675 () | 2674592..2676529 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| CO543_RS13680 () | 2676593..2678254 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| CO543_RS13685 () | 2678251..2678814 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| CO543_RS13690 () | 2679104..2679469 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| CO543_RS13695 () | 2679511..2679696 | + | 186 | WP_001302295.1 | YlcI/YnfO family protein | - |
| CO543_RS13700 () | 2679826..2679966 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| CO543_RS13705 () | 2680323..2680547 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| CO543_RS13710 () | 2680612..2680818 | - | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| CO543_RS13715 () | 2681046..2681192 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| CO543_RS13720 () | 2681192..2681761 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| CO543_RS13725 () | 2682032..2682565 | - | 534 | WP_000992148.1 | lysozyme | - |
| CO543_RS13730 () | 2682616..2682960 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| CO543_RS13735 () | 2682965..2683180 | - | 216 | WP_000284518.1 | class II holin family protein | - |
| CO543_RS13740 () | 2683256..2683525 | - | 270 | WP_001289717.1 | DUF826 domain-containing protein | - |
| CO543_RS13745 () | 2683563..2683745 | - | 183 | WP_001213059.1 | DUF1378 family protein | - |
| CO543_RS13750 () | 2683893..2685194 | - | 1302 | Protein_2699 | sialate O-acetylesterase | - |
| CO543_RS13755 () | 2685190..2685423 | - | 234 | Protein_2700 | RusA family crossover junction endodeoxyribonuclease | - |
| CO543_RS13760 () | 2685436..2686485 | - | 1050 | WP_001265168.1 | DUF968 domain-containing protein | - |
| CO543_RS13765 () | 2686487..2686765 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| CO543_RS13770 () | 2686933..2687088 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| CO543_RS13775 () | 2687334..2687438 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| CO543_RS13780 () | 2687554..2688141 | - | 588 | WP_000207955.1 | DUF551 domain-containing protein | - |
| CO543_RS13785 () | 2688144..2688335 | - | 192 | WP_001014296.1 | hypothetical protein | - |
| CO543_RS13790 () | 2688337..2688774 | - | 438 | WP_000515959.1 | ead/Ea22-like family protein | - |
| CO543_RS13795 () | 2688761..2689078 | - | 318 | WP_000156547.1 | hypothetical protein | - |
| CO543_RS13800 () | 2689032..2689349 | - | 318 | WP_001017965.1 | DUF4752 family protein | - |
| CO543_RS13805 () | 2689339..2689641 | - | 303 | WP_001310212.1 | DUF4406 domain-containing protein | - |
| CO543_RS13810 () | 2689638..2689955 | - | 318 | WP_000017339.1 | hypothetical protein | - |
| CO543_RS13815 () | 2689952..2690668 | - | 717 | WP_000451012.1 | DUF1627 domain-containing protein | - |
| CO543_RS13820 () | 2690702..2691163 | - | 462 | WP_000139462.1 | replication protein P | - |
| CO543_RS13825 () | 2691156..2692193 | - | 1038 | WP_001262323.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| CO543_RS13830 () | 2692262..2692687 | - | 426 | WP_000693915.1 | toxin YdaT family protein | - |
| CO543_RS13835 () | 2692671..2692994 | - | 324 | WP_000711018.1 | transcriptional regulator | - |
| CO543_RS13840 () | 2693119..2693595 | + | 477 | WP_000948454.1 | DNA-binding transcriptional repressor RacR | - |
| CO543_RS13845 () | 2693911..2694063 | + | 153 | WP_001414141.1 | DUF1391 family protein | - |
| CO543_RS13850 () | 2694178..2694693 | - | 516 | WP_000559928.1 | hypothetical protein | - |
| CO543_RS13855 () | 2694817..2695215 | + | 399 | Protein_2720 | 3'-5' exoribonuclease | - |
| CO543_RS13860 () | 2695277..2695546 | + | 270 | WP_000003742.1 | excisionase | - |
| CO543_RS13865 () | 2695515..2696633 | + | 1119 | WP_000074985.1 | hypothetical protein ; Integrase | Integrase |
| CO543_RS13870 () | 2696800..2697594 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CO543_RS13875 () | 2697591..2698637 | + | 1047 | WP_000759316.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CO543_RS13880 () | 2698793..2699614 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CO543_RS13885 () | 2699630..2700541 | - | 912 | WP_000291263.1 | N-acetylglucosamine kinase | - |
| CO543_RS13890 () | 2700570..2701814 | - | 1245 | WP_001251367.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CO543_RS13895 () | 2701814..2702515 | - | 702 | WP_001033699.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| CO543_RS13900 () | 2702508..2703707 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|