MGE detailed information
MGE type: Conjugative plasmid MGE length: 124933 bp
Accession: NZ_CP089029 Location: 1..124933 Organism: Klebsiella pneumoniae strain 49210 Replicon: plasmid p49210-124.9
Accession: NZ_CP089029 Location: 1..124933 Organism: Klebsiella pneumoniae strain 49210 Replicon: plasmid p49210-124.9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRY78_RS27710 (LRY78_27700) | 1..1014 | + | 1014 | WP_015065551.1 | plasmid replication initiator RepA | - |
| LRY78_RS27715 (LRY78_27705) | 1102..1806 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27720 (LRY78_27710) | 1950..2504 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LRY78_RS27725 (LRY78_27715) | 2635..3465 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LRY78_RS27730 (LRY78_27720) | 3603..4043 | + | 441 | Protein_5 | CatB-related O-acetyltransferase | - |
| LRY78_RS27735 (LRY78_27725) | 4097..4801 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27740 (LRY78_27730) | 4867..6381 | + | 1515 | Protein_7 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LRY78_RS27745 (LRY78_27735) | 6423..6665 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| LRY78_RS27750 (LRY78_27740) | 6697..7347 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LRY78_RS27755 (LRY78_27745) | 7453..8652 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LRY78_RS27760 (LRY78_27750) | 8684..9568 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| LRY78_RS27765 (LRY78_27755) | 9706..10098 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LRY78_RS27770 (LRY78_27760) | 10102..10851 | + | 750 | Protein_13 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LRY78_RS27775 (LRY78_27765) | 10875..11480 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LRY78_RS27780 (LRY78_27770) | 11575..14472 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LRY78_RS27785 (LRY78_27775) | 14507..16309 | + | 1803 | Protein_16 | Tn3 family transposase TnpA_IS3000 | Transposase |
| LRY78_RS27790 (LRY78_27780) | 16385..16786 | + | 402 | Protein_17 | phage shock protein operon transcriptional activator | - |
| LRY78_RS27795 (LRY78_27785) | 16880..17524 | + | 645 | WP_014386481.1 | Pentapeptide repeat protein | ARG |
| LRY78_RS27800 (LRY78_27790) | 17616..18347 | - | 732 | Protein_19 | putative oxidoreductase YghA | VF |
| LRY78_RS27805 (LRY78_27795) | 18397..19101 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27810 (LRY78_27800) | 19635..20648 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LRY78_RS27815 (LRY78_27805) | 20804..21277 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| LRY78_RS27820 (LRY78_27810) | 21498..21614 | + | 117 | Protein_23 | hypothetical protein | Relaxase |
| LRY78_RS27825 (LRY78_27815) | 21724..21789 | + | 66 | Protein_24 | hypothetical protein | Relaxase |
| LRY78_RS27830 (LRY78_27820) | 21907..22671 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LRY78_RS27835 (LRY78_27825) | 22811..22876 | - | 66 | Protein_26 | EAL domain-containing protein | - |
| LRY78_RS27840 (LRY78_27830) | 22932..24146 | + | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| LRY78_RS27845 (LRY78_27835) | 24180..25613 | - | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| LRY78_RS27850 (LRY78_27840) | 25712..25997 | + | 286 | Protein_29 | IS1 family transposase | - |
| LRY78_RS27855 (LRY78_27845) | 25932..26636 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27860 (LRY78_27850) | 26706..29489 | - | 2784 | Protein_31 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LRY78_RS27865 (LRY78_27855) | 29503..29847 | + | 345 | Protein_32 | WbuC family cupin fold metalloprotein | - |
| LRY78_RS27870 (LRY78_27860) | 29894..30769 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| LRY78_RS27875 (LRY78_27865) | 31025..32287 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| LRY78_RS27880 (LRY78_27870) | 32469..32687 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LRY78_RS27885 (LRY78_27875) | 32851..33408 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LRY78_RS27890 (LRY78_27880) | 33591..34451 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LRY78_RS27895 (LRY78_27885) | 34661..35065 | + | 405 | Protein_38 | IS91 family transposase ISPps1 | Transposase |
| LRY78_RS27900 (LRY78_27890) | 35172..36008 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LRY78_RS27905 (LRY78_27895) | 36008..36811 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LRY78_RS27910 (LRY78_27900) | 36872..37687 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LRY78_RS27915 (LRY78_27905) | 38017..38103 | + | 87 | Protein_42 | Arm DNA-binding domain-containing protein | - |
| LRY78_RS27920 (LRY78_27910) | 38375..39379 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| LRY78_RS27925 (LRY78_27915) | 39458..41224 | - | 1767 | Protein_44 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LRY78_RS27930 (LRY78_27920) | 41276..41980 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27935 (LRY78_27925) | 42325..43317 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| LRY78_RS27940 (LRY78_27930) | 43374..43505 | + | 132 | Protein_47 | ISNCY family transposase | - |
| LRY78_RS27945 (LRY78_27935) | 43502..44113 | - | 612 | WP_000176305.1 | DUF2913 family protein | - |
| LRY78_RS27950 (LRY78_27940) | 44167..44448 | - | 282 | WP_001568067.1 | hypothetical protein | - |
| LRY78_RS27955 (LRY78_27945) | 44630..44956 | + | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| LRY78_RS27960 (LRY78_27950) | 45977..46681 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27965 (LRY78_27955) | 46737..47135 | + | 399 | Protein_52 | recombinase family protein | - |
| LRY78_RS27970 (LRY78_27960) | 47182..47832 | + | 651 | WP_015065500.1 | SOS response-associated peptidase | - |
| LRY78_RS27975 (LRY78_27965) | 48129..49124 | + | 996 | WP_019725651.1 | hypothetical protein | - |
| LRY78_RS27980 (LRY78_27970) | 49197..49520 | + | 324 | WP_019725650.1 | hypothetical protein | - |
| LRY78_RS27985 (LRY78_27975) | 49954..50148 | + | 195 | WP_019725033.1 | hypothetical protein | - |
| LRY78_RS27990 (LRY78_27980) | 50192..50422 | - | 231 | WP_019725034.1 | hypothetical protein | - |
| LRY78_RS27995 (LRY78_27985) | 50436..50639 | - | 204 | WP_019725040.1 | HHA domain-containing protein | - |
| LRY78_RS28000 (LRY78_27990) | 50673..51041 | - | 369 | WP_015065502.1 | hypothetical protein | - |
| LRY78_RS28005 (LRY78_27995) | 51085..51579 | - | 495 | WP_009310053.1 | hypothetical protein | - |
| LRY78_RS28010 (LRY78_28000) | 51610..52182 | - | 573 | WP_015065504.1 | hypothetical protein | - |
| LRY78_RS28015 (LRY78_28005) | 52179..52427 | - | 249 | WP_019725036.1 | hypothetical protein | - |
| LRY78_RS28020 (LRY78_28010) | 53023..53241 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LRY78_RS28025 (LRY78_28015) | 53243..53548 | + | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LRY78_RS28030 (LRY78_28020) | 53717..54118 | + | 402 | WP_073558206.1 | hypothetical protein | - |
| LRY78_RS28035 (LRY78_28025) | 54145..54468 | + | 324 | WP_004197641.1 | hypothetical protein | - |
| LRY78_RS28040 (LRY78_28030) | 54465..55481 | + | 1017 | WP_004197639.1 | hypothetical protein | - |
| LRY78_RS28045 (LRY78_28035) | 55679..56473 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| LRY78_RS28050 (LRY78_28040) | 56913..57215 | - | 303 | WP_004197636.1 | hypothetical protein | - |
| LRY78_RS28055 (LRY78_28045) | 57212..57838 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| LRY78_RS28060 (LRY78_28050) | 58463..59338 | - | 876 | WP_004197644.1 | replication initiation protein | - |
| LRY78_RS28065 (LRY78_28055) | 59750..61021 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| LRY78_RS28070 (LRY78_28060) | 61021..61452 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LRY78_RS28075 (LRY78_28065) | 61686..62657 | + | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| LRY78_RS28080 (LRY78_28070) | 62660..63331 | + | 672 | WP_032330269.1 | plasmid partitioning/stability family protein | - |
| LRY78_RS28085 (LRY78_28075) | 63394..63624 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| LRY78_RS28090 (LRY78_28080) | 63820..63989 | + | 170 | Protein_77 | hypothetical protein | - |
| LRY78_RS28095 (LRY78_28085) | 64061..64762 | + | 702 | WP_004152355.1 | DNA methylase | - |
| LRY78_RS28100 (LRY78_28090) | 64762..64983 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| LRY78_RS28105 (LRY78_28095) | 64993..65412 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| LRY78_RS28110 (LRY78_28100) | 65466..66233 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| LRY78_RS28115 (LRY78_28105) | 66913..67341 | + | 429 | WP_023279469.1 | antirestriction protein | - |
| LRY78_RS28120 (LRY78_28110) | 67384..67890 | + | 507 | WP_015065510.1 | antirestriction protein ArdA | - |
| LRY78_RS28125 (LRY78_28115) | 67933..68124 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| LRY78_RS28130 (LRY78_28120) | 68312..68566 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| LRY78_RS28135 (LRY78_28125) | 68601..68921 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| LRY78_RS28140 (LRY78_28130) | 69600..69827 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| LRY78_RS28145 (LRY78_28135) | 69919..70149 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| LRY78_RS28150 (LRY78_28140) | 70201..71556 | + | 1356 | WP_015065512.1 | DUF3560 domain-containing protein | - |
| LRY78_RS28155 (LRY78_28145) | 71604..72167 | + | 564 | WP_004152756.1 | methyltransferase | - |
| LRY78_RS28160 (LRY78_28150) | 72998..73540 | + | 543 | WP_015065513.1 | single-stranded DNA-binding protein | - |
| LRY78_RS28165 (LRY78_28155) | 73589..73837 | + | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| LRY78_RS28170 (LRY78_28160) | 73907..75964 | + | 2058 | WP_231822191.1 | ParB/RepB/Spo0J family partition protein | - |
| LRY78_RS28175 (LRY78_28165) | 76009..76440 | + | 432 | WP_015065515.1 | conjugation system SOS inhibitor PsiB | - |
| LRY78_RS28180 (LRY78_28170) | 76437..77165 | + | 729 | WP_015065618.1 | plasmid SOS inhibition protein A | - |
| LRY78_RS28185 (LRY78_28175) | 77162..77488 | + | 327 | WP_015065517.1 | hypothetical protein | - |
| LRY78_RS28190 (LRY78_28180) | 77544..77918 | + | 375 | WP_023287106.1 | hypothetical protein | - |
| LRY78_RS28200 (LRY78_28190) | 78213..78332 | + | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| LRY78_RS28205 (LRY78_28195) | 79026..79298 | + | 273 | WP_023287105.1 | hypothetical protein | - |
| LRY78_RS28210 (LRY78_28200) | 79295..79645 | + | 351 | WP_032330277.1 | hypothetical protein | - |
| LRY78_RS28215 (LRY78_28205) | 79660..79977 | + | 318 | WP_032445789.1 | hypothetical protein | - |
| LRY78_RS28220 (LRY78_28210) | 80817..81173 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| LRY78_RS28225 (LRY78_28215) | 81234..81446 | + | 213 | WP_032445756.1 | hypothetical protein | - |
| LRY78_RS28230 (LRY78_28220) | 81457..81681 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| LRY78_RS28235 (LRY78_28225) | 81762..82082 | + | 321 | WP_015065521.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LRY78_RS28240 (LRY78_28230) | 82072..82350 | + | 279 | WP_020801586.1 | helix-turn-helix transcriptional regulator | - |
| LRY78_RS28245 (LRY78_28235) | 82351..82752 | + | 402 | WP_015065522.1 | helix-turn-helix domain-containing protein | - |
| LRY78_RS28250 (LRY78_28240) | 83581..84402 | + | 822 | WP_032441618.1 | DUF932 domain-containing protein | - |
| LRY78_RS28255 (LRY78_28245) | 84435..84764 | + | 330 | WP_011977736.1 | DUF5983 family protein | - |
| LRY78_RS28260 (LRY78_28250) | 84797..85282 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| LRY78_RS28265 (LRY78_28255) | 85673..86089 | + | 417 | WP_072145360.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LRY78_RS28270 (LRY78_28260) | 86289..87008 | + | 720 | WP_015065526.1 | hypothetical protein | - |
| LRY78_RS28275 (LRY78_28265) | 87141..87344 | + | 204 | WP_187767307.1 | TraY domain-containing protein | - |
| LRY78_RS28280 (LRY78_28270) | 87409..87777 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LRY78_RS28285 (LRY78_28275) | 87791..88096 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LRY78_RS28290 (LRY78_28280) | 88116..88682 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| LRY78_RS28295 (LRY78_28285) | 88669..89409 | + | 741 | WP_015065528.1 | type-F conjugative transfer system secretin TraK | - |
| LRY78_RS28300 (LRY78_28290) | 89409..90833 | + | 1425 | WP_073558192.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LRY78_RS28305 (LRY78_28295) | 90947..91531 | + | 585 | WP_009309868.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LRY78_RS28310 (LRY78_28300) | 91663..92073 | + | 411 | WP_078174848.1 | hypothetical protein | - |
| LRY78_RS28315 (LRY78_28305) | 92179..92397 | + | 219 | WP_004152501.1 | hypothetical protein | - |
| LRY78_RS28320 (LRY78_28310) | 92398..92709 | + | 312 | WP_004152502.1 | hypothetical protein | - |
| LRY78_RS28325 (LRY78_28315) | 92776..93180 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| LRY78_RS28330 (LRY78_28320) | 93223..93612 | + | 390 | WP_004153076.1 | hypothetical protein | - |
| LRY78_RS28335 (LRY78_28325) | 93620..94018 | + | 399 | WP_011977783.1 | hypothetical protein | - |
| LRY78_RS28340 (LRY78_28330) | 94090..96729 | + | 2640 | WP_023284638.1 | type IV secretion system protein TraC | - |
| LRY78_RS28345 (LRY78_28335) | 96729..97118 | + | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| LRY78_RS28350 (LRY78_28340) | 97118..97744 | + | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| LRY78_RS28355 (LRY78_28345) | 97786..98175 | + | 390 | WP_004194992.1 | hypothetical protein | - |
| LRY78_RS28360 (LRY78_28350) | 98172..99161 | + | 990 | WP_231822192.1 | conjugal transfer pilus assembly protein TraU | - |
| LRY78_RS28365 (LRY78_28355) | 99174..99812 | + | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LRY78_RS28370 (LRY78_28360) | 99871..101826 | + | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LRY78_RS28375 (LRY78_28365) | 101858..102112 | + | 255 | WP_073558194.1 | conjugal transfer protein TrbE | - |
| LRY78_RS28380 (LRY78_28370) | 102090..102338 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| LRY78_RS28385 (LRY78_28375) | 102351..102677 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| LRY78_RS28390 (LRY78_28380) | 102698..103450 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LRY78_RS28395 (LRY78_28385) | 103461..103700 | + | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LRY78_RS28400 (LRY78_28390) | 103672..104244 | + | 573 | WP_023292147.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LRY78_RS28405 (LRY78_28395) | 104237..104665 | + | 429 | WP_015065560.1 | hypothetical protein | - |
| LRY78_RS28410 (LRY78_28400) | 104652..106022 | + | 1371 | WP_004159274.1 | conjugal transfer pilus assembly protein TraH | - |
| LRY78_RS28415 (LRY78_28405) | 106022..108865 | + | 2844 | WP_015065537.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LRY78_RS28420 (LRY78_28410) | 108876..109400 | + | 525 | WP_015065538.1 | hypothetical protein | - |
| LRY78_RS28425 (LRY78_28415) | 109709..110440 | + | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
| LRY78_RS28430 (LRY78_28420) | 110633..111322 | + | 690 | WP_072101983.1 | hypothetical protein | - |
| LRY78_RS28435 (LRY78_28425) | 111451..113763 | + | 2313 | WP_231822193.1 | type IV conjugative transfer system coupling protein TraD | - |
| LRY78_RS28440 (LRY78_28430) | 113763..119021 | + | 5259 | WP_231822194.1 | Multifunctional conjugation protein TraI | Relaxase |
| LRY78_RS28445 (LRY78_28435) | 119101..119826 | + | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LRY78_RS28450 (LRY78_28440) | 119982..120575 | + | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| LRY78_RS28455 (LRY78_28445) | 120736..121339 | + | 604 | Protein_149 | PIN domain-containing protein | - |
| LRY78_RS28460 (LRY78_28450) | 121389..122033 | + | 645 | WP_064291676.1 | hypothetical protein | - |
| LRY78_RS28465 (LRY78_28455) | 122089..122739 | + | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| LRY78_RS28470 (LRY78_28460) | 122736..123044 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| LRY78_RS28475 (LRY78_28465) | 123148..123703 | + | 556 | Protein_153 | Phospholipase D | VF |
| LRY78_RS28480 (LRY78_28470) | 123839..124108 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| LRY78_RS28485 (LRY78_28475) | 124320..124397 | + | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|