MGE detailed information
MGE type: Genomic_island MGE length: 10270 bp
Accession: NZ_CP088142 Location: 835414..845683 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Accession: NZ_CP088142 Location: 835414..845683 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM93_RS04000 (830882) | 830882..832399 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LRM93_RS04005 (832475) | 832475..833020 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LRM93_RS04010 (833285) | 833285..834043 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LRM93_RS04020 (834328) | 834328..835134 | - | 807 | WP_077906915.1 | DUF1460 domain-containing protein | - |
| LRM93_RS04025 (835414) | 835414..835665 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LRM93_RS04030 (835874) | 835874..836101 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LRM93_RS04035 (836101) | 836101..836499 | + | 399 | WP_000911335.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LRM93_RS04040 (837307) | 837307..837843 | + | 537 | WP_001038501.1 | hypothetical protein | VF |
| LRM93_RS04045 (837890) | 837890..838522 | + | 633 | WP_000835263.1 | YfdX family protein | - |
| LRM93_RS04050 (839241) | 839241..839822 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| LRM93_RS04055 (839942) | 839942..842425 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| LRM93_RS04060 (842466) | 842466..843209 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| LRM93_RS04065 (843206) | 843206..844282 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LRM93_RS04070 (844426) | 844426..844938 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LRM93_RS04075 (844925) | 844925..845683 | + | 759 | WP_000134799.1 | hypothetical protein | - |
| LRM93_RS04080 (845893) | 845893..846729 | - | 837 | WP_115367771.1 | nickel/cobalt efflux protein RcnA | - |
| LRM93_RS04085 (846851) | 846851..847123 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LRM93_RS04090 (847154) | 847154..848383 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LRM93_RS04095 (848525) | 848525..848980 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LRM93_RS04100 (849084) | 849084..849947 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|