MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP088142 Location: 4014324..4017427 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Accession: NZ_CP088142 Location: 4014324..4017427 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM93_RS19490 (4009616) | 4009616..4009813 | - | 198 | WP_231849110.1 | AfaD family invasin | - |
| LRM93_RS19495 (4009846) | 4009846..4010061 | - | 216 | WP_001077812.1 | hypothetical protein | - |
| LRM93_RS23235 (4010058) | 4010058..4011536 | - | 1479 | WP_250645066.1 | fimbria/pilus outer membrane usher protein | - |
| LRM93_RS23240 (4011479) | 4011479..4012501 | - | 1023 | WP_250645138.1 | fimbria/pilus outer membrane usher protein | - |
| LRM93_RS19505 (4012518) | 4012518..4013258 | - | 741 | WP_001676217.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| LRM93_RS19510 (4013380) | 4013380..4013910 | - | 531 | WP_232520924.1 | SEF14 fimbria major subunit SefA | - |
| LRM93_RS19515 (4014232) | 4014232..4015365 | + | 1134 | Protein_3823 | IS3 family transposase | - |
| LRM93_RS19520 (4015397) | 4015397..4015537 | - | 141 | Protein_3824 | Arm DNA-binding domain-containing protein | - |
| LRM93_RS19525 (4015943) | 4015943..4016251 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| LRM93_RS19530 (4016254) | 4016254..4016493 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| LRM93_RS19535 (4016602) | 4016602..4016850 | - | 249 | WP_000168388.1 | ribbon-helix-helix domain-containing protein | - |
| LRM93_RS19540 (4017041) | 4017041..4017472 | - | 432 | Protein_3828 | IS630 family transposase ISEc33 | Transposase |
| LRM93_RS19550 (4018229) | 4018229..4019248 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LRM93_RS19555 (4019276) | 4019276..4019806 | - | 531 | WP_000896758.1 | gluconokinase | - |
| LRM93_RS19560 (4020023) | 4020023..4021054 | + | 1032 | WP_000453347.1 | L-idonate 5-dehydrogenase | - |
| LRM93_RS19565 (4021079) | 4021079..4021843 | + | 765 | WP_000998685.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|