MGE detailed information
MGE type: Prophage MGE length: 32953 bp
Accession: NZ_CP088142 Location: 283028..315980 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Accession: NZ_CP088142 Location: 283028..315980 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM93_RS01255 (278259) | 278259..278594 | + | 336 | WP_000626193.1 | universal stress protein UspB | - |
| LRM93_RS01260 (278735) | 278735..280231 | - | 1497 | WP_000902764.1 | inorganic phosphate transporter PitA | - |
| LRM93_RS01265 (280462) | 280462..281658 | + | 1197 | WP_000439236.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LRM93_RS01270 (281964) | 281964..283031 | + | 1068 | WP_000359836.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| LRM93_RS01275 (283028) | 283028..285769 | + | 2742 | WP_000202481.1 | ribosome-associated ATPase/putative transporter RbbA | - |
| LRM93_RS01280 (285769) | 285769..286893 | + | 1125 | WP_001214764.1 | ABC transporter permease | - |
| LRM93_RS01285 (286982) | 286982..287383 | - | 402 | WP_001190057.1 | nickel-responsive transcriptional regulator NikR | - |
| LRM93_RS01290 (287475) | 287475..288053 | - | 579 | WP_000284365.1 | hypothetical protein | VF |
| LRM93_RS01295 (288105) | 288105..289154 | - | 1050 | WP_000179593.1 | AI-2E family transporter | - |
| LRM93_RS01300 (289244) | 289244..290475 | + | 1232 | Protein_256 | MFS transporter | - |
| LRM93_RS01305 (290479) | 290479..291036 | - | 558 | WP_001245277.1 | DcrB family lipoprotein | - |
| LRM93_RS01310 (291109) | 291109..291774 | - | 666 | WP_001519906.1 | 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | - |
| LRM93_RS01315 (291944) | 291944..292189 | + | 246 | WP_001541054.1 | sulfurtransferase TusA | - |
| LRM93_RS01320 (292213) | 292213..293856 | - | 1644 | WP_000789678.1 | hypothetical protein | VF |
| LRM93_RS01325 (294056) | 294056..296254 | - | 2199 | WP_000106653.1 | Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA | - |
| LRM93_RS01330 (296335) | 296335..296961 | - | 627 | WP_000964735.1 | lysoplasmalogenase | - |
| LRM93_RS01335 (297103) | 297103..297474 | + | 372 | WP_000042852.1 | DUF2500 domain-containing protein | - |
| LRM93_RS01340 (297496) | 297496..297765 | - | 270 | WP_000906759.1 | DUF1145 family protein | - |
| LRM93_RS01345 (297755) | 297755..298351 | - | 597 | WP_000743278.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| LRM93_RS01350 (298477) | 298477..299952 | + | 1476 | WP_001118683.1 | hypothetical protein | VF |
| LRM93_RS01355 (299955) | 299955..300623 | + | 669 | WP_000617729.1 | hypothetical protein | VF |
| LRM93_RS01360 (300616) | 300616..301671 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| LRM93_RS01365 (301917) | 301917..302771 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| LRM93_RS01370 (303095) | 303095..304198 | + | 1104 | WP_001676601.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| LRM93_RS01375 (304282) | 304282..304416 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| LRM93_RS01380 (304394) | 304394..304777 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| LRM93_RS01385 (305197) | 305197..306306 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| LRM93_RS01390 (306366) | 306366..307292 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| LRM93_RS01395 (307289) | 307289..308566 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| LRM93_RS01400 (308563) | 308563..309330 | + | 768 | WP_000082080.1 | hypothetical protein | VF |
| LRM93_RS01405 (309332) | 309332..310045 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| LRM93_RS01410 (310176) | 310176..310397 | + | 222 | WP_001522145.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LRM93_RS01415 (310394) | 310394..310762 | + | 369 | WP_000174964.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LRM93_RS01420 (311021) | 311021..312337 | + | 1317 | WP_000624755.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| LRM93_RS01425 (312442) | 312442..313329 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| LRM93_RS01430 (313326) | 313326..314171 | + | 846 | WP_000572193.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| LRM93_RS01435 (314173) | 314173..315243 | + | 1071 | WP_000907840.1 | hypothetical protein | VF |
| LRM93_RS01440 (315240) | 315240..315980 | + | 741 | WP_000073555.1 | glycerophosphodiester phosphodiesterase | - |
| LRM93_RS01445 (315993) | 315993..316409 | - | 417 | WP_000826045.1 | DUF2756 family protein | - |
| LRM93_RS01450 (316535) | 316535..318277 | + | 1743 | WP_000805113.1 | gamma-glutamyltransferase | - |
| LRM93_RS01455 (318322) | 318322..319356 | - | 1035 | WP_000675711.1 | phosphotriesterase | - |
| LRM93_RS01460 (319353) | 319353..320324 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|