MGE detailed information
MGE type: Prophage MGE length: 11488 bp
Accession: NZ_CP087392 Location: 323878..335365 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Accession: NZ_CP087392 Location: 323878..335365 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ86_RS01375 (LOZ86_01375) | 319386..320585 | + | 1200 | WP_230242781.1 | AI-2E family transporter | - |
| LOZ86_RS01380 (LOZ86_01380) | 320652..321014 | - | 363 | WP_230242782.1 | DUF596 domain-containing protein | - |
| LOZ86_RS01385 (LOZ86_01385) | 321064..321450 | - | 387 | WP_181892613.1 | hypothetical protein | - |
| LOZ86_RS01390 (LOZ86_01390) | 321566..322111 | + | 546 | WP_039483148.1 | hypothetical protein | - |
| LOZ86_RS01395 (LOZ86_01395) | 322154..322711 | - | 558 | WP_039513374.1 | hypothetical protein | - |
| LOZ86_RS01400 (LOZ86_01400) | 322746..323186 | - | 441 | WP_207783057.1 | type II toxin-antitoxin system VapC family toxin | - |
| LOZ86_RS01405 (LOZ86_01405) | 323186..323425 | - | 240 | WP_039483142.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LOZ86_RS01410 (LOZ86_01410) | 323878..325296 | - | 1419 | WP_039483139.1 | Fic family protein | - |
| LOZ86_RS01415 (LOZ86_01415) | 325482..325808 | - | 327 | WP_111778839.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS01420 (LOZ86_01420) | 325906..326163 | + | 258 | WP_111778840.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS01425 (LOZ86_01425) | 326179..326496 | - | 318 | WP_039513379.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS01430 (LOZ86_01430) | 326980..328233 | - | 1254 | WP_039513381.1 | IS607 family transposase ISCbo6 | Transposase |
| LOZ86_RS01435 (LOZ86_01435) | 328310..329026 | - | 717 | WP_039513383.1 | PmeII family type II restriction endonuclease | - |
| LOZ86_RS01440 (LOZ86_01440) | 329410..330255 | + | 846 | WP_230242783.1 | nuclease domain-containing protein | - |
| LOZ86_RS01445 (LOZ86_01445) | 330441..331112 | - | 672 | Protein_283 | DNA damage-inducible protein D | - |
| LOZ86_RS01450 (LOZ86_01450) | 331189..332297 | + | 1109 | WP_103164902.1 | IS3 family transposase ISEca11 | Transposase |
| LOZ86_RS01455 (LOZ86_01455) | 332314..332469 | - | 156 | Protein_285 | DNA damage-inducible protein D | - |
| LOZ86_RS01460 (LOZ86_01460) | 332665..332751 | + | 87 | Protein_286 | integrase | - |
| LOZ86_RS01465 (LOZ86_01465) | 332760..332846 | - | 87 | Protein_287 | hypothetical protein | - |
| LOZ86_RS01470 (LOZ86_01470) | 332956..333480 | + | 525 | WP_039483130.1 | hypothetical protein | Antitoxin Detail |
| LOZ86_RS01475 (LOZ86_01475) | 333509..334396 | + | 888 | WP_039483127.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LOZ86_RS01480 (LOZ86_01480) | 334502..335365 | - | 864 | WP_039483124.1 | YicC/YloC family endoribonuclease | - |
| LOZ86_RS01485 (LOZ86_01485) | 335464..336372 | - | 909 | WP_039483122.1 | LysR family transcriptional regulator | - |
| LOZ86_RS01490 (LOZ86_01490) | 336586..337533 | - | 948 | WP_039483119.1 | isoaspartyl peptidase/L-asparaginase | - |
| LOZ86_RS01495 (LOZ86_01495) | 337590..338411 | - | 822 | WP_039483117.1 | M55 family metallopeptidase | - |
| LOZ86_RS01500 (LOZ86_01500) | 338438..339496 | - | 1059 | WP_230243143.1 | P1 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|