MGE detailed information
MGE type: Genomic_island MGE length: 89677 bp
Accession: NZ_CP087290 Location: 2828474..2918150 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Accession: NZ_CP087290 Location: 2828474..2918150 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO741_RS13675 (2824882) | 2824882..2825601 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| LO741_RS13680 (2825598) | 2825598..2827229 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| LO741_RS13685 (2827409) | 2827409..2827639 | + | 231 | WP_000371717.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LO741_RS13690 (2827651) | 2827651..2827923 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LO741_RS13695 (2828150) | 2828150..2828446 | + | 297 | WP_001317561.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| LO741_RS13700 (2828474) | 2828474..2828647 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| LO741_RS13705 (2828766) | 2828766..2830283 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| LO741_RS13710 (2830520) | 2830520..2831977 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| LO741_RS13715 (2832036) | 2832036..2834183 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| LO741_RS13720 (2834263) | 2834263..2835597 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| LO741_RS13725 (2835963) | 2835963..2836328 | - | 366 | Protein_2672 | transcriptional regulator | - |
| LO741_RS13730 (2836475) | 2836475..2837455 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| LO741_RS13735 (2837525) | 2837525..2838700 | - | 1176 | Protein_2674 | hypothetical protein | VF |
| LO741_RS13740 (2839583) | 2839583..2839909 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LO741_RS13745 (2839906) | 2839906..2840169 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LO741_RS13750 (2840241) | 2840241..2841107 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| LO741_RS13755 (2841192) | 2841192..2841389 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| LO741_RS13760 (2841401) | 2841401..2841889 | - | 489 | WP_000761677.1 | DUF5983 family protein | - |
| LO741_RS13765 (2841886) | 2841886..2842263 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| LO741_RS13770 (2842310) | 2842310..2842684 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LO741_RS13775 (2842764) | 2842764..2842985 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| LO741_RS13780 (2843048) | 2843048..2843524 | - | 477 | WP_001366855.1 | RadC family protein | - |
| LO741_RS13785 (2843540) | 2843540..2844019 | - | 480 | WP_120136233.1 | antirestriction protein | - |
| LO741_RS13790 (2844101) | 2844101..2844919 | - | 819 | WP_001175148.1 | DUF932 domain-containing protein | - |
| LO741_RS13795 (2845009) | 2845009..2845242 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| LO741_RS13800 (2845248) | 2845248..2845925 | - | 678 | WP_120136232.1 | hypothetical protein | - |
| LO741_RS13805 (2846044) | 2846044..2846928 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| LO741_RS13810 (2847035) | 2847035..2847967 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| LO741_RS13815 (2847964) | 2847964..2848773 | - | 810 | WP_023155731.1 | hypothetical protein | - |
| LO741_RS13820 (2850524) | 2850524..2851255 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| LO741_RS13825 (2851349) | 2851349..2851504 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| LO741_RS13830 (2851528) | 2851528..2851788 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| LO741_RS13835 (2851800) | 2851800..2852006 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| LO741_RS13840 (2852440) | 2852440..2854044 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| LO741_RS13845 (2855609) | 2855609..2856175 | + | 567 | WP_001126807.1 | inovirus-type Gp2 protein | - |
| LO741_RS13850 (2856433) | 2856433..2857005 | + | 573 | WP_274432101.1 | hypothetical protein | - |
| LO741_RS13855 (2857074) | 2857074..2857322 | + | 249 | WP_039023560.1 | AlpA family transcriptional regulator | - |
| LO741_RS13860 (2857573) | 2857573..2858211 | - | 639 | WP_000684812.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| LO741_RS13865 (2858484) | 2858484..2859638 | + | 1155 | WP_032297239.1 | oligogalacturonate lyase family protein | - |
| LO741_RS13870 (2859668) | 2859668..2860468 | + | 801 | WP_000345753.1 | hypothetical protein | VF |
| LO741_RS13875 (2860523) | 2860523..2860846 | + | 324 | WP_001696527.1 | cupin domain-containing protein | - |
| LO741_RS13885 (2862518) | 2862518..2862736 | + | 219 | Protein_2704 | IS3 family transposase ISEc31 | Transposase |
| LO741_RS13890 (2862804) | 2862804..2863784 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| LO741_RS13895 (2864603) | 2864603..2865391 | + | 789 | WP_001696174.1 | DeoR family transcriptional regulator | - |
| LO741_RS13900 (2865509) | 2865509..2865982 | + | 474 | WP_001696173.1 | PTS sugar transporter subunit IIB | - |
| LO741_RS13905 (2866001) | 2866001..2866771 | + | 771 | WP_001696172.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LO741_RS13910 (2866761) | 2866761..2867627 | + | 867 | WP_001767853.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| LO741_RS13915 (2867637) | 2867637..2868074 | + | 438 | WP_001696170.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LO741_RS13920 (2868155) | 2868155..2869189 | + | 1035 | WP_001696169.1 | glycoside hydrolase family 88 protein | - |
| LO741_RS13925 (2869214) | 2869214..2870680 | + | 1467 | WP_024210507.1 | DUF2264 domain-containing protein | - |
| LO741_RS13930 (2870725) | 2870725..2871729 | + | 1005 | WP_001767848.1 | hypothetical protein | - |
| LO741_RS13935 (2871748) | 2871748..2874147 | + | 2400 | WP_024210505.1 | hypothetical protein | VF |
| LO741_RS13940 (2874157) | 2874157..2876844 | + | 2688 | WP_001696166.1 | autotransporter domain-containing protein | - |
| LO741_RS13945 (2876880) | 2876880..2877023 | + | 144 | WP_001767846.1 | hypothetical protein | - |
| LO741_RS13950 (2877191) | 2877191..2877403 | - | 213 | Protein_2717 | transposase | - |
| LO741_RS13960 (2878700) | 2878700..2879314 | + | 615 | Protein_2719 | hypothetical protein | VF |
| LO741_RS13965 (2879789) | 2879789..2880630 | - | 842 | Protein_2720 | hypothetical protein | - |
| LO741_RS13970 (2881556) | 2881556..2881792 | + | 237 | WP_029392418.1 | hypothetical protein | - |
| LO741_RS13975 (2881833) | 2881833..2882813 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| LO741_RS13980 (2883108) | 2883108..2883632 | - | 525 | WP_021547712.1 | hypothetical protein | VF |
| LO741_RS13985 (2884218) | 2884218..2885867 | + | 1650 | WP_021547713.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| LO741_RS13990 (2885872) | 2885872..2887197 | + | 1326 | WP_021547714.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| LO741_RS13995 (2887178) | 2887178..2892250 | + | 5073 | WP_021547715.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| LO741_RS14000 (2892240) | 2892240..2893430 | + | 1191 | WP_021547716.1 | DUF262 domain-containing protein | - |
| LO741_RS14005 (2893435) | 2893435..2893926 | + | 492 | WP_274432142.1 | AAA family ATPase | - |
| LO741_RS14010 (2894212) | 2894212..2894979 | + | 768 | WP_274432144.1 | hypothetical protein | - |
| LO741_RS14015 (2895037) | 2895037..2895390 | - | 354 | WP_000937307.1 | DNA sulfur modification protein DndE | - |
| LO741_RS14020 (2895390) | 2895390..2897390 | - | 2001 | WP_021547718.1 | DNA sulfur modification protein DndD | - |
| LO741_RS14025 (2897380) | 2897380..2899014 | - | 1635 | WP_021547719.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| LO741_RS14030 (2899007) | 2899007..2900095 | - | 1089 | WP_021547720.1 | DNA sulfur modification protein DndB | - |
| LO741_RS14035 (2900298) | 2900298..2900673 | - | 376 | Protein_2734 | DNA-binding protein | - |
| LO741_RS14040 (2900992) | 2900992..2901729 | + | 738 | WP_021547722.1 | OmpW family outer membrane protein | - |
| LO741_RS14045 (2902148) | 2902148..2903044 | + | 897 | Protein_2736 | WYL domain-containing protein | - |
| LO741_RS14050 (2903093) | 2903093..2904172 | + | 1080 | WP_021547724.1 | hypothetical protein | - |
| LO741_RS14055 (2904219) | 2904219..2905790 | + | 1572 | WP_269549515.1 | cobalamin adenosyltransferase | - |
| LO741_RS14060 (2905787) | 2905787..2906053 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| LO741_RS14065 (2906193) | 2906193..2906390 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| LO741_RS14070 (2906443) | 2906443..2908116 | + | 1674 | WP_274432156.1 | sulfatase-like hydrolase/transferase | - |
| LO741_RS14075 (2908260) | 2908260..2909294 | - | 1035 | WP_262955705.1 | tetratricopeptide repeat protein | - |
| LO741_RS14080 (2909344) | 2909344..2909619 | + | 276 | WP_000179213.1 | IS1 family transposase IS1A | Transposase |
| LO741_RS14085 (2909538) | 2909538..2909981 | + | 444 | WP_021547728.1 | IS1 family transposase | - |
| LO741_RS14090 (2910559) | 2910559..2911953 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| LO741_RS14095 (2912148) | 2912148..2913578 | - | 1431 | WP_274432186.1 | glycoside hydrolase family 32 protein | - |
| LO741_RS14100 (2913578) | 2913578..2914855 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| LO741_RS14105 (2914918) | 2914918..2917044 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| LO741_RS14110 (2917140) | 2917140..2918150 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| LO741_RS14115 (2918300) | 2918300..2919484 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| LO741_RS14125 (2919843) | 2919843..2920418 | - | 576 | WP_001317578.1 | transcriptional regulator | - |
| LO741_RS14130 (2920455) | 2920455..2922152 | - | 1698 | WP_000068940.1 | protein-disulfide reductase DsbD | - |
| LO741_RS14135 (2922128) | 2922128..2922466 | - | 339 | WP_000883405.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|