NZ_CP0872873957572..4147313

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 189742 bp
Accession: NZ_CP087287        Location: 3957572..4147313         Organism: Escherichia coli strain APEC 16-1068       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LO742_RS19635 (3953281) 3953281..3955416 - 2136 WP_000839776.1 ornithine decarboxylase -
LO742_RS19640 (3955579) 3955579..3955662 - 84 WP_212734243.1 hypothetical protein -
LO742_RS19645 (3955815) 3955815..3956522 + 708 WP_000234491.1 DUF554 domain-containing protein -
LO742_RS19655 (3956901) 3956901..3958163 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
LO742_RS19660 (3958615) 3958615..3962130 + 3516 WP_000344091.1 AAA domain-containing protein -
LO742_RS19665 (3962239) 3962239..3963738 - 1500 WP_001026222.1 phosphoethanolamine transferase -
LO742_RS19670 (3963913) 3963913..3964659 - 747 WP_001350744.1 invasion outer membrane protein Tia -
LO742_RS19675 (3965019) 3965019..3966029 - 1011 WP_000758687.1 hypothetical protein VF
LO742_RS19680 (3966073) 3966073..3966573 - 501 WP_000620429.1 hypothetical protein VF
LO742_RS19685 (3966648) 3966648..3967169 - 522 WP_000723802.1 hypothetical protein VF
LO742_RS19690 (3967196) 3967196..3967732 - 537 WP_000597711.1 hypothetical protein VF
LO742_RS19695 (3967742) 3967742..3968323 - 582 WP_000261303.1 hypothetical protein VF
LO742_RS19700 (3968360) 3968360..3969079 - 720 WP_001363619.1 hypothetical protein VF
LO742_RS19705 (3969165) 3969165..3971675 - 2511 WP_000654934.1 hypothetical protein VF
LO742_RS19710 (3971734) 3971734..3972294 - 561 WP_000274060.1 hypothetical protein VF
LO742_RS19715 (3972384) 3972384..3972932 - 549 WP_000597759.1 hypothetical protein VF
LO742_RS19720 (3973139) 3973139..3973303 - 165 WP_001305388.1 PapB/FocB family fimbrial expression transcriptional regulator -
LO742_RS19725 (3973884) 3973884..3974117 + 234 WP_000006207.1 hypothetical protein VF
LO742_RS19730 (3974460) 3974460..3974696 - 237 WP_000958091.1 AlpA family transcriptional regulator -
LO742_RS19735 (3974765) 3974765..3975340 - 576 WP_000991571.1 hypothetical protein -
LO742_RS19740 (3975598) 3975598..3976164 - 567 WP_001126806.1 inovirus-type Gp2 protein -
LO742_RS19745 (3976511) 3976511..3977718 + 1208 Protein_3850 IS3 family transposase ISEc48 Transposase
LO742_RS19750 (3977753) 3977753..3978118 - 366 WP_000639467.1 hypothetical protein -
LO742_RS19755 (3978161) 3978161..3979525 - 1365 WP_000948756.1 hypothetical protein VF
LO742_RS19760 (3979924) 3979924..3981141 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
LO742_RS19765 (3981138) 3981138..3983147 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
LO742_RS19770 (3983137) 3983137..3984384 + 1248 WP_001350739.1 two-component system response regulator PgtA -
LO742_RS19775 (3984630) 3984630..3984743 + 114 Protein_3856 transposase DNA-binding-containing protein -
LO742_RS19780 (3984775) 3984775..3984867 + 93 Protein_3857 ATP-dependent helicase -
LO742_RS19785 (3984976) 3984976..3985299 - 324 WP_015953064.1 hypothetical protein -
LO742_RS19790 (3985364) 3985364..3986008 - 645 WP_001332013.1 hypothetical protein -
LO742_RS19795 (3986029) 3986029..3986298 - 270 WP_000226516.1 PerC family transcriptional regulator -
LO742_RS19800 (3986377) 3986377..3987022 - 646 Protein_3861 ParB N-terminal domain-containing protein -
LO742_RS19805 (3987007) 3987007..3988239 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
LO742_RS19810 (3988375) 3988375..3989019 - 645 WP_001013662.1 hypothetical protein -
LO742_RS19815 (3989213) 3989213..3990616 - 1404 WP_000956492.1 AAA family ATPase -
LO742_RS19825 (3992047) 3992047..3993259 + 1213 Protein_3866 IS256 family transposase -
LO742_RS19830 (3993439) 3993439..3995487 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
LO742_RS19835 (3996269) 3996269..3997009 - 741 WP_001075450.1 inovirus Gp2 family protein -
LO742_RS19840 (3997189) 3997189..3997362 + 174 WP_023150487.1 hypothetical protein -
LO742_RS19845 (3998701) 3998701..3999489 + 789 WP_000816188.1 hypothetical protein -
LO742_RS19850 (3999486) 3999486..4000436 - 951 WP_000157734.1 hypothetical protein -
LO742_RS19855 (4000542) 4000542..4001426 + 885 WP_000010416.1 50S ribosome-binding GTPase -
LO742_RS19860 (4001629) 4001629..4002309 + 681 WP_001282927.1 WYL domain-containing protein -
LO742_RS19865 (4002457) 4002457..4003134 + 678 WP_001097312.1 hypothetical protein -
LO742_RS19870 (4003140) 4003140..4003373 + 234 WP_001278287.1 DUF905 family protein -
LO742_RS19875 (4003463) 4003463..4004281 + 819 WP_001175142.1 DUF932 domain-containing protein -
LO742_RS19880 (4004372) 4004372..4004857 + 486 WP_000860054.1 antirestriction protein -
LO742_RS19885 (4004872) 4004872..4005348 + 477 WP_001186782.1 RadC family protein -
LO742_RS19890 (4005417) 4005417..4005638 + 222 WP_000692312.1 DUF987 domain-containing protein -
LO742_RS19895 (4005717) 4005717..4006094 + 378 WP_015953067.1 type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA Antitoxin Detail
LO742_RS19900 (4006141) 4006141..4006518 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
LO742_RS19905 (4006515) 4006515..4007003 + 489 WP_000761714.1 DUF5983 family protein -
LO742_RS19910 (4007015) 4007015..4007212 + 198 WP_000839254.1 DUF957 domain-containing protein -
LO742_RS19915 (4007297) 4007297..4008142 + 846 WP_001280513.1 DUF4942 domain-containing protein -
LO742_RS19920 (4008213) 4008213..4009748 + 1536 WP_000492897.1 hypothetical protein VF
LO742_RS19925 (4010145) 4010145..4010315 + 171 Protein_3886 IS110 family transposase ISEc32 Transposase
LO742_RS19930 (4011125) 4011125..4012108 + 984 WP_001331698.1 hypothetical protein VF
LO742_RS19935 (4012180) 4012180..4013328 + 1149 WP_000905916.1 hypothetical protein VF
LO742_RS19940 (4013352) 4013352..4015028 + 1677 WP_001331697.1 hypothetical protein VF
LO742_RS19945 (4015038) 4015038..4015778 + 741 WP_000030755.1 hypothetical protein VF
LO742_RS19950 (4015775) 4015775..4017802 + 2028 WP_000579525.1 hypothetical protein VF
LO742_RS19955 (4017837) 4017837..4019042 + 1206 WP_001161829.1 hypothetical protein VF
LO742_RS19960 (4019151) 4019151..4019774 - 624 WP_274429327.1 polysialyltransferase family glycosyltransferase -
LO742_RS19965 (4019947) 4019947..4020270 - 324 WP_274431287.1 polysialyltransferase family glycosyltransferase -
LO742_RS19970 (4021545) 4021545..4022721 - 1177 Protein_3895 hypothetical protein VF
LO742_RS19975 (4022722) 4022722..4023973 - 1252 Protein_3896 GDSL-type esterase/lipase family protein -
LO742_RS19980 (4023973) 4023973..4025013 - 1041 WP_000066003.1 hypothetical protein VF
LO742_RS19985 (4025010) 4025010..4025633 - 624 WP_274429330.1 hypothetical protein VF
LO742_RS19990 (4025683) 4025683..4026342 - 660 WP_000590258.1 hypothetical protein VF
LO742_RS19995 (4026339) 4026339..4027115 - 777 WP_000124301.1 hypothetical protein VF
LO742_RS20000 (4028174) 4028174..4028710 - 537 WP_000942829.1 hypothetical protein VF
LO742_RS20005 (4028712) 4028712..4029890 - 1179 WP_000097208.1 hypothetical protein VF
LO742_RS20010 (4029887) 4029887..4030864 - 978 WP_000633202.1 hypothetical protein VF
LO742_RS20015 (4030861) 4030861..4031466 - 606 WP_001331694.1 hypothetical protein VF
LO742_RS20020 (4031463) 4031463..4031834 - 372 WP_000820096.1 hypothetical protein VF
LO742_RS20025 (4031831) 4031831..4032394 - 564 WP_001115118.1 hypothetical protein VF
LO742_RS20030 (4032398) 4032398..4032853 - 456 WP_001087289.1 hypothetical protein VF
LO742_RS20035 (4032870) 4032870..4034093 - 1224 WP_001173408.1 hypothetical protein VF
LO742_RS20040 (4034093) 4034093..4035586 - 1494 WP_000249340.1 hypothetical protein VF
LO742_RS20045 (4035586) 4035586..4037646 - 2061 WP_001350731.1 hypothetical protein VF
LO742_RS20050 (4037676) 4037676..4038635 - 960 WP_001350730.1 hypothetical protein VF
LO742_RS20055 (4038653) 4038653..4039063 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
LO742_RS20060 (4039129) 4039129..4039938 - 810 WP_000895874.1 hypothetical protein VF
LO742_RS20065 (4040102) 4040102..4044664 - 4563 WP_001034562.1 hypothetical protein VF
LO742_RS20070 (4045148) 4045148..4046830 - 1683 WP_000259302.1 glycolate permease GlcA -
LO742_RS20075 (4047186) 4047186..4049357 - 2172 WP_000084100.1 malate synthase G -
LO742_RS20080 (4049379) 4049379..4049783 - 405 WP_000853256.1 GlcG family protein -
LO742_RS20085 (4049788) 4049788..4051011 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
LO742_RS20090 (4051022) 4051022..4052074 - 1053 WP_000943074.1 glycolate oxidase subunit GlcE -
LO742_RS20095 (4052074) 4052074..4053573 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
LO742_RS20100 (4053824) 4053824..4054588 + 765 WP_001314155.1 transcriptional regulator GlcC -
LO742_RS20105 (4054595) 4054595..4055737 - 1143 WP_001331688.1 protein YghO -
LO742_RS20110 (4056108) 4056108..4057832 + 1725 WP_011703666.1 hypothetical protein VF
LO742_RS20115 (4057829) 4057829..4058743 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
LO742_RS20120 (4058775) 4058775..4059023 + 249 WP_000248098.1 acyl carrier protein -
LO742_RS20125 (4059023) 4059023..4060195 + 1173 WP_000524959.1 hypothetical protein VF
LO742_RS20130 (4060230) 4060230..4061309 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
LO742_RS20135 (4061306) 4061306..4062376 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
LO742_RS20140 (4062407) 4062407..4062967 - 561 WP_001141149.1 YtfJ family protein -
LO742_RS20145 (4062967) 4062967..4063803 - 837 WP_000984967.1 hypothetical protein -
LO742_RS20150 (4063803) 4063803..4065152 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
LO742_RS20155 (4065198) 4065198..4065956 - 759 WP_001445422.1 hypothetical protein -
LO742_RS20160 (4065988) 4065988..4066701 - 714 WP_001076282.1 dTMP kinase -
LO742_RS20165 (4066876) 4066876..4067568 + 693 WP_001190683.1 dTMP kinase -
LO742_RS20170 (4067617) 4067617..4069116 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
LO742_RS20175 (4069408) 4069408..4071267 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
LO742_RS20180 (4071472) 4071472..4072338 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
LO742_RS20185 (4072471) 4072471..4072719 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
LO742_RS20190 (4072732) 4072732..4073073 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
LO742_RS20195 (4073066) 4073066..4073554 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
LO742_RS20200 (4073547) 4073547..4074041 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
LO742_RS20205 (4074041) 4074041..4075744 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
LO742_RS20210 (4075741) 4075741..4076919 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
LO742_RS20215 (4076909) 4076909..4077895 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
LO742_RS20220 (4077898) 4077898..4079016 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
LO742_RS20225 (4079205) 4079205..4079492 - 288 WP_001059136.1 DUF2623 family protein YghW -
LO742_RS20230 (4079611) 4079611..4080498 - 888 WP_001350729.1 YghX family hydrolase -
LO742_RS20235 (4080655) 4080655..4081695 + 1041 WP_000262189.1 L-glyceraldehyde 3-phosphate reductase -
LO742_RS20240 (4081735) 4081735..4082229 - 495 WP_000439331.1 TIGR00645 family protein -
LO742_RS20245 (4082420) 4082420..4083304 + 885 WP_000018758.1 hypothetical protein VF
LO742_RS20250 (4083343) 4083343..4083768 - 426 WP_001240712.1 TonB system transport protein ExbD -
LO742_RS20255 (4083775) 4083775..4084509 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
LO742_RS20260 (4084761) 4084761..4085948 + 1188 WP_000763935.1 cystathionine beta-lyase -
LO742_RS20265 (4086088) 4086088..4086747 + 660 WP_000268419.1 DedA family general envelope maintenance protein YghB -
LO742_RS20270 (4086787) 4086787..4087686 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
LO742_RS20275 (4087880) 4087880..4089043 + 1164 WP_001058819.1 alcohol dehydrogenase -
LO742_RS20280 (4089148) 4089148..4089975 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
LO742_RS20285 (4090175) 4090175..4091101 + 927 WP_000691616.1 YbjP/YqhG family protein -
LO742_RS20290 (4091152) 4091152..4091409 + 258 WP_000848521.1 lipoprotein YqhH -
LO742_RS20295 (4091451) 4091451..4093670 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
LO742_RS20300 (4093922) 4093922..4094671 + 750 WP_000438655.1 FadR/GntR family transcriptional regulator -
LO742_RS20305 (4094994) 4094994..4096466 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
LO742_RS20310 (4096463) 4096463..4097479 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
LO742_RS20315 (4097490) 4097490..4098500 + 1011 WP_000214536.1 hypothetical protein VF
LO742_RS20320 (4098573) 4098573..4099556 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
LO742_RS20325 (4099598) 4099598..4100080 + 483 WP_001259754.1 TRAP transporter small permease -
LO742_RS20330 (4100091) 4100091..4101395 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
LO742_RS20335 (4101466) 4101466..4102878 - 1413 WP_000059395.1 cell division protein FtsP -
LO742_RS20340 (4102953) 4102953..4103690 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
LO742_RS20345 (4103925) 4103925..4106183 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
LO742_RS20350 (4106321) 4106321..4107928 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
LO742_RS20355 (4108037) 4108037..4108519 - 483 WP_000183493.1 GyrI-like domain-containing protein -
LO742_RS20360 (4108572) 4108572..4108964 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
LO742_RS20365 (4109116) 4109116..4109775 + 660 WP_001221493.1 hypothetical protein VF
LO742_RS20370 (4109772) 4109772..4111121 + 1350 WP_000673382.1 quorum sensing histidine kinase QseC -
LO742_RS20375 (4111167) 4111167..4111499 - 333 WP_000914696.1 DUF2645 family protein -
LO742_RS20380 (4111506) 4111506..4112216 - 711 WP_000834021.1 hypothetical protein -
LO742_RS20385 (4112219) 4112219..4112698 - 480 WP_000069056.1 hypothetical protein VF
LO742_RS20390 (4112948) 4112948..4113529 + 582 WP_001569186.1 NADPH:quinone oxidoreductase MdaB -
LO742_RS20395 (4113560) 4113560..4113874 + 315 WP_000633738.1 putative quinol monooxygenase -
LO742_RS20400 (4113919) 4113919..4114806 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
LO742_RS20405 (4114803) 4114803..4115750 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
LO742_RS20410 (4115761) 4115761..4116798 - 1038 WP_001298372.1 hypothetical protein VF
LO742_RS20415 (4116807) 4116807..4117790 - 984 WP_000986428.1 hypothetical protein VF
LO742_RS20420 (4117787) 4117787..4118596 - 810 WP_000940869.1 hypothetical protein VF
LO742_RS20425 (4118971) 4118971..4121112 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
LO742_RS20430 (4121176) 4121176..4123068 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
LO742_RS20435 (4123097) 4123097..4123678 - 582 WP_000105733.1 esterase YqiA -
LO742_RS20440 (4123678) 4123678..4124505 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
LO742_RS20445 (4124530) 4124530..4124952 - 423 WP_000833393.1 DUF1249 family protein -
LO742_RS20450 (4124953) 4124953..4125582 - 630 WP_000917117.1 ADP-ribose diphosphatase -
LO742_RS20455 (4125787) 4125787..4127268 + 1482 WP_000735289.1 outer membrane channel protein TolC -
LO742_RS20460 (4127416) 4127416..4128087 + 672 WP_000831543.1 DUF1190 family protein -
LO742_RS20465 (4128093) 4128093..4129253 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
LO742_RS20470 (4129738) 4129738..4131534 + 1797 WP_104976656.1 aryl-sulfate sulfotransferase -
LO742_RS20475 (4131552) 4131552..4132220 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
LO742_RS20480 (4132235) 4132235..4132906 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
LO742_RS20485 (4132952) 4132952..4133740 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
LO742_RS20490 (4133883) 4133883..4134656 + 774 WP_001295627.1 zinc transporter ZupT -
LO742_RS20495 (4134718) 4134718..4134888 - 171 WP_001296421.1 hypothetical protein -
LO742_RS20500 (4135459) 4135459..4136022 + 564 WP_000915007.1 hypothetical protein VF
LO742_RS20505 (4136109) 4136109..4138631 + 2523 WP_001060674.1 hypothetical protein VF
LO742_RS20510 (4138647) 4138647..4139387 + 741 WP_001350725.1 hypothetical protein VF
LO742_RS20515 (4139384) 4139384..4140433 + 1050 WP_000631271.1 pilus protein -
LO742_RS20520 (4140487) 4140487..4141140 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
LO742_RS20525 (4141514) 4141514..4141813 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
LO742_RS20530 (4141848) 4141848..4142048 - 201 WP_001296424.1 cell surface composition regulator GlgS -
LO742_RS20535 (4142318) 4142318..4142947 + 630 WP_000599932.1 DUF1449 family protein -
LO742_RS20540 (4142974) 4142974..4144635 + 1662 WP_001298380.1 flotillin family protein -
LO742_RS20545 (4144875) 4144875..4144934 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- (4144833) 4144833..4144974 - 142 NuclAT_0 - -
- (4144833) 4144833..4144974 - 142 NuclAT_0 - -
- (4144833) 4144833..4144974 - 142 NuclAT_0 - -
- (4144833) 4144833..4144974 - 142 NuclAT_0 - -
LO742_RS20550 (4145054) 4145054..4146487 - 1434 WP_000869177.1 hypothetical protein VF
LO742_RS20555 (4146535) 4146535..4149375 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
LO742_RS20560 (4149398) 4149398..4150699 - 1302 WP_000046243.1 inorganic triphosphatase -
LO742_RS20565 (4150941) 4150941..4151561 + 621 WP_001125331.1 TIGR04211 family SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance