MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 151793 bp
Accession: NZ_CP087031 Location: 1..151793 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-68 Replicon: plasmid P6
Accession: NZ_CP087031 Location: 1..151793 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-68 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE44_RS22940 (LOE44_22915) | 603..872 | - | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE44_RS22945 (LOE44_22920) | 890..1480 | - | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE44_RS22950 (LOE44_22925) | 1589..2146 | - | 558 | WP_040652314.1 | methyltransferase | - |
| LOE44_RS22955 (LOE44_22930) | 2139..3047 | - | 909 | Protein_4 | cation diffusion facilitator family transporter | - |
| LOE44_RS22960 (LOE44_22935) | 3037..3807 | - | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE44_RS22965 (LOE44_22940) | 3894..4511 | - | 618 | WP_024099354.1 | cation transporter | - |
| LOE44_RS22970 (LOE44_22945) | 4625..4951 | - | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE44_RS22975 (LOE44_22950) | 4948..5376 | - | 429 | WP_224557734.1 | IS607 family transposase ISChh1 | Transposase |
| LOE44_RS22980 (LOE44_22955) | 5624..6163 | + | 540 | WP_223865966.1 | SCO family protein | - |
| LOE44_RS22985 (LOE44_22960) | 6160..6603 | + | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE44_RS22990 (LOE44_22965) | 6600..7262 | + | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE44_RS22995 (LOE44_22970) | 7333..7764 | + | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE44_RS23000 (LOE44_22975) | 7776..8396 | + | 621 | WP_224557759.1 | SCO family protein | - |
| LOE44_RS23005 (LOE44_22980) | 8426..9742 | + | 1317 | WP_229940656.1 | M23 family metallopeptidase | - |
| LOE44_RS23010 (LOE44_22985) | 9763..10215 | + | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE44_RS23015 (LOE44_22990) | 10226..11008 | + | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE44_RS23020 (LOE44_22995) | 11012..11488 | + | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE44_RS23025 (LOE44_23000) | 11495..13030 | + | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE44_RS23030 (LOE44_23005) | 13027..13191 | + | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE44_RS23035 (LOE44_23010) | 13217..13717 | - | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE44_RS23040 (LOE44_23015) | 13779..16130 | - | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE44_RS23045 (LOE44_23020) | 16347..18674 | + | 2328 | WP_111550081.1 | Copper-transporting P-type ATPase | VF |
| LOE44_RS23050 (LOE44_23025) | 19201..19599 | + | 399 | WP_067293094.1 | FixH family protein | - |
| LOE44_RS23055 (LOE44_23030) | 19596..21032 | + | 1437 | WP_067293091.1 | Cation efflux system protein CusB | VF |
| LOE44_RS23060 (LOE44_23035) | 21029..24184 | + | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE44_RS23065 (LOE44_23040) | 24228..25469 | - | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE44_RS23070 (LOE44_23045) | 25566..26024 | - | 459 | WP_037929563.1 | cytochrome c | - |
| LOE44_RS23075 (LOE44_23050) | 26021..27325 | - | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE44_RS23080 (LOE44_23055) | 27334..27867 | - | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE44_RS23085 (LOE44_23060) | 27977..28693 | - | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE44_RS23090 (LOE44_23065) | 28740..30098 | - | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE44_RS23095 (LOE44_23070) | 30110..31570 | - | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE44_RS23100 (LOE44_23075) | 31570..31791 | - | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE44_RS23105 (LOE44_23080) | 31865..32281 | - | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE44_RS23110 (LOE44_23085) | 32454..32663 | - | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE44_RS23115 (LOE44_23090) | 32802..35309 | + | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE44_RS23120 (LOE44_23095) | 35329..35748 | + | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE44_RS23125 (LOE44_23100) | 35856..36725 | + | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE44_RS23130 (LOE44_23105) | 36787..37512 | + | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE44_RS23135 (LOE44_23110) | 37599..38708 | + | 1110 | WP_224557743.1 | permease | - |
| LOE44_RS23140 (LOE44_23115) | 38705..39445 | - | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE44_RS23145 (LOE44_23120) | 39442..39933 | - | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE44_RS23150 (LOE44_23125) | 39930..40634 | - | 705 | WP_037929522.1 | SCO family protein | - |
| LOE44_RS23155 (LOE44_23130) | 40634..40924 | - | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE44_RS23160 (LOE44_23135) | 41007..41519 | - | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE44_RS23165 (LOE44_23140) | 41516..42112 | - | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE44_RS23170 (LOE44_23145) | 42109..42534 | - | 426 | WP_224557746.1 | cytochrome c | - |
| LOE44_RS23775 | 42684..42818 | - | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE44_RS23175 (LOE44_23150) | 42885..43340 | - | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE44_RS23180 (LOE44_23155) | 43381..44820 | - | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE44_RS23185 (LOE44_23160) | 44911..45264 | - | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE44_RS23190 (LOE44_23165) | 45476..46099 | - | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE44_RS23195 (LOE44_23170) | 46117..46845 | - | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE44_RS23200 (LOE44_23175) | 47347..47607 | + | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE44_RS23205 (LOE44_23180) | 47616..48935 | + | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE44_RS23210 (LOE44_23185) | 49109..50068 | - | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE44_RS23215 (LOE44_23190) | 50670..51191 | - | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE44_RS23220 (LOE44_23195) | 51204..52067 | - | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE44_RS23225 (LOE44_23200) | 52085..54016 | - | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE44_RS23230 (LOE44_23205) | 54330..56087 | + | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE44_RS23235 (LOE44_23210) | 56388..58022 | + | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE44_RS23240 (LOE44_23215) | 58039..58904 | + | 866 | Protein_62 | TniB family NTP-binding protein | - |
| LOE44_RS23245 (LOE44_23220) | 59928..60524 | - | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE44_RS23250 (LOE44_23225) | 60528..61412 | - | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE44_RS23255 (LOE44_23230) | 61571..62665 | + | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
| LOE44_RS23260 (LOE44_23235) | 62769..66107 | - | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE44_RS23265 (LOE44_23240) | 66312..67199 | + | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE44_RS23270 (LOE44_23245) | 67707..68843 | + | 1137 | WP_229940660.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE44_RS23275 (LOE44_23250) | 68833..69792 | + | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE44_RS23280 (LOE44_23255) | 70032..71189 | + | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE44_RS23285 (LOE44_23260) | 71255..72298 | + | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE44_RS23290 (LOE44_23265) | 72589..74766 | + | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE44_RS23295 (LOE44_23270) | 74866..75339 | + | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE44_RS23300 (LOE44_23275) | 75723..75887 | + | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE44_RS23305 (LOE44_23280) | 76126..77571 | + | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE44_RS23310 (LOE44_23285) | 77581..77868 | - | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE44_RS23315 (LOE44_23290) | 78288..78692 | + | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE44_RS23320 (LOE44_23295) | 78747..79343 | - | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE44_RS23325 (LOE44_23300) | 79383..80288 | + | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE44_RS23330 (LOE44_23305) | 80426..81625 | + | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE44_RS23335 (LOE44_23310) | 81753..82193 | + | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE44_RS23340 (LOE44_23315) | 82303..82821 | + | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE44_RS23345 (LOE44_23320) | 82925..83416 | + | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE44_RS23350 (LOE44_23325) | 83427..83804 | + | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE44_RS23355 (LOE44_23330) | 83806..84003 | + | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE44_RS23360 (LOE44_23335) | 84079..84498 | + | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE44_RS23365 (LOE44_23340) | 84491..85135 | + | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE44_RS23370 (LOE44_23345) | 85194..85595 | + | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE44_RS23375 (LOE44_23350) | 85592..86293 | + | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE44_RS23380 (LOE44_23355) | 86816..87109 | - | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE44_RS23385 (LOE44_23360) | 87286..87666 | + | 381 | Protein_91 | hypothetical protein | - |
| LOE44_RS23390 (LOE44_23365) | 87768..88875 | + | 1108 | Protein_92 | IS110 family transposase ISSfr2 | Transposase |
| LOE44_RS23395 (LOE44_23370) | 89101..91770 | + | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE44_RS23400 (LOE44_23375) | 91747..92193 | - | 447 | Protein_94 | IS6 family transposase | - |
| LOE44_RS23405 (LOE44_23380) | 92263..92853 | + | 591 | WP_052418560.1 | LysR substrate-binding domain-containing protein | - |
| LOE44_RS23410 (LOE44_23385) | 92884..93804 | + | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE44_RS23415 (LOE44_23390) | 93953..94951 | + | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE44_RS23420 (LOE44_23395) | 95017..95562 | + | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE44_RS23425 (LOE44_23400) | 95562..96842 | + | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE44_RS23430 (LOE44_23405) | 96832..98175 | + | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE44_RS23435 (LOE44_23410) | 98172..98666 | + | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE44_RS23440 (LOE44_23415) | 98663..99898 | + | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE44_RS23445 (LOE44_23420) | 99909..100394 | + | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE44_RS23450 (LOE44_23425) | 100391..101620 | + | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE44_RS23455 (LOE44_23430) | 101630..102547 | + | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE44_RS23465 (LOE44_23440) | 103437..104068 | - | 632 | Protein_107 | IS3 family transposase ISPko4 | Transposase |
| LOE44_RS23470 (LOE44_23445) | 104129..104548 | + | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE44_RS23475 (LOE44_23450) | 104749..105468 | - | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE44_RS23480 (LOE44_23455) | 105625..106485 | + | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE44_RS23485 (LOE44_23460) | 106840..107859 | - | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE44_RS23490 (LOE44_23465) | 107985..108410 | + | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE44_RS23495 (LOE44_23470) | 108485..109450 | - | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE44_RS23500 (LOE44_23475) | 109447..110784 | - | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE44_RS23505 (LOE44_23480) | 110781..111263 | - | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE44_RS23510 (LOE44_23485) | 111400..111951 | + | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE44_RS23515 (LOE44_23490) | 111953..112525 | + | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE44_RS23520 (LOE44_23495) | 112534..113013 | + | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE44_RS23525 (LOE44_23500) | 113010..113537 | + | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE44_RS23530 (LOE44_23505) | 113534..114058 | + | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE44_RS23535 (LOE44_23510) | 114082..115053 | + | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE44_RS23540 (LOE44_23515) | 115050..117350 | + | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE44_RS23545 (LOE44_23520) | 117347..117883 | + | 537 | WP_229940780.1 | hypothetical protein | - |
| LOE44_RS23550 (LOE44_23525) | 117880..118092 | + | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE44_RS23555 (LOE44_23530) | 118095..119019 | - | 925 | Protein_125 | IS5 family transposase ISUnCu15 | Transposase |
| LOE44_RS23560 (LOE44_23535) | 119339..120367 | - | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE44_RS23565 (LOE44_23540) | 120651..122879 | - | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE44_RS23570 (LOE44_23545) | 122876..123940 | - | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE44_RS23575 (LOE44_23550) | 124411..125773 | + | 1363 | WP_229939207.1 | IS3 family transposase ISPko4 | Transposase |
| LOE44_RS23580 (LOE44_23555) | 125891..126676 | + | 786 | WP_229939180.1 | zinc-binding dehydrogenase | - |
| LOE44_RS23585 (LOE44_23560) | 126695..127099 | - | 405 | WP_229939178.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE44_RS23590 (LOE44_23565) | 127289..127789 | + | 501 | Protein_132 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE44_RS23595 (LOE44_23570) | 127815..129200 | - | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE44_RS23600 (LOE44_23575) | 129227..129808 | - | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE44_RS23605 (LOE44_23580) | 129927..130589 | - | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE44_RS23610 (LOE44_23585) | 130650..130976 | - | 327 | Protein_136 | DEAD/DEAH box helicase family protein | - |
| LOE44_RS23615 (LOE44_23590) | 131152..132606 | - | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE44_RS23620 (LOE44_23595) | 132786..133844 | - | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE44_RS23625 (LOE44_23600) | 133841..136591 | - | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE44_RS23630 (LOE44_23605) | 136588..137010 | - | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE44_RS23635 (LOE44_23610) | 137014..137262 | - | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE44_RS23640 (LOE44_23615) | 137410..138399 | - | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE44_RS23645 (LOE44_23620) | 138510..139967 | - | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE44_RS23650 (LOE44_23625) | 139970..140701 | - | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE44_RS23655 (LOE44_23630) | 140705..141349 | - | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE44_RS23660 (LOE44_23635) | 141352..142353 | - | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE44_RS23665 (LOE44_23640) | 142353..142841 | - | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE44_RS23670 (LOE44_23645) | 142845..143654 | - | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE44_RS23675 (LOE44_23650) | 143644..144732 | - | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE44_RS23680 (LOE44_23655) | 144898..147156 | - | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE44_RS23685 (LOE44_23660) | 147257..147532 | - | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE44_RS23690 (LOE44_23665) | 147556..147840 | - | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE44_RS23695 (LOE44_23670) | 147837..148418 | - | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE44_RS23700 (LOE44_23680) | 149007..149276 | + | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE44_RS23705 (LOE44_23685) | 149362..150015 | + | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE44_RS23710 (LOE44_23690) | 150236..151393 | + | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|