MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157665 bp
Accession: NZ_CP086985 Location: 1..157665 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P6
Accession: NZ_CP086985 Location: 1..157665 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE09_RS22925 (LOE09_22915) | 161..448 | + | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE09_RS22930 (LOE09_22920) | 458..1903 | - | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE09_RS22935 (LOE09_22925) | 2142..2306 | - | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE09_RS22940 (LOE09_22930) | 2690..3163 | - | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE09_RS22945 (LOE09_22935) | 3263..5440 | - | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE09_RS22950 (LOE09_22940) | 5731..6774 | - | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE09_RS22955 (LOE09_22945) | 6840..7997 | - | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE09_RS22960 (LOE09_22950) | 8237..9196 | - | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE09_RS22965 (LOE09_22955) | 9186..10388 | - | 1203 | WP_089852475.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE09_RS22970 (LOE09_22960) | 10830..11717 | - | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE09_RS22975 (LOE09_22965) | 11922..15260 | + | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE09_RS22980 (LOE09_22970) | 15364..16458 | - | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
| LOE09_RS22985 (LOE09_22975) | 16617..17501 | + | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE09_RS22990 (LOE09_22980) | 17505..18101 | + | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE09_RS22995 (LOE09_22985) | 19125..19991 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE09_RS23000 (LOE09_22990) | 20008..21642 | - | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE09_RS23005 (LOE09_22995) | 21943..23700 | - | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE09_RS23010 (LOE09_23000) | 24014..25945 | + | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE09_RS23015 (LOE09_23005) | 25963..26826 | + | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE09_RS23020 (LOE09_23010) | 26839..27360 | + | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE09_RS23025 (LOE09_23015) | 27962..28921 | + | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE09_RS23030 (LOE09_23020) | 29095..30414 | - | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE09_RS23035 (LOE09_23025) | 30423..30683 | - | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE09_RS23040 (LOE09_23030) | 31185..31913 | + | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE09_RS23045 (LOE09_23035) | 31931..32554 | + | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE09_RS23050 (LOE09_23040) | 32766..33119 | + | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE09_RS23055 (LOE09_23045) | 33210..34649 | + | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE09_RS23060 (LOE09_23050) | 34690..35145 | + | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE09_RS23810 | 35212..35346 | + | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE09_RS23065 (LOE09_23055) | 35496..35921 | + | 426 | WP_224557746.1 | cytochrome c | - |
| LOE09_RS23070 (LOE09_23060) | 35918..36514 | + | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE09_RS23075 (LOE09_23065) | 36511..37023 | + | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE09_RS23080 (LOE09_23070) | 37106..37396 | + | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE09_RS23085 (LOE09_23075) | 37396..38100 | + | 705 | WP_037929522.1 | SCO family protein | - |
| LOE09_RS23090 (LOE09_23080) | 38097..38588 | + | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE09_RS23095 (LOE09_23085) | 38585..39325 | + | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE09_RS23100 (LOE09_23090) | 39322..40431 | - | 1110 | WP_224557743.1 | permease | - |
| LOE09_RS23105 (LOE09_23095) | 40518..41243 | - | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE09_RS23110 (LOE09_23100) | 41305..42174 | - | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE09_RS23115 (LOE09_23105) | 42282..42701 | - | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE09_RS23120 (LOE09_23110) | 42721..45228 | - | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE09_RS23125 (LOE09_23115) | 45367..45576 | + | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE09_RS23130 (LOE09_23120) | 45749..46165 | + | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE09_RS23135 (LOE09_23125) | 46239..46460 | + | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE09_RS23140 (LOE09_23130) | 46460..47920 | + | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE09_RS23145 (LOE09_23135) | 47932..49290 | + | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE09_RS23150 (LOE09_23140) | 49337..50053 | + | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE09_RS23155 (LOE09_23145) | 50163..50696 | + | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE09_RS23160 (LOE09_23150) | 50705..52009 | + | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE09_RS23165 (LOE09_23155) | 52024..52464 | + | 441 | WP_009820142.1 | cytochrome c | - |
| LOE09_RS23170 (LOE09_23160) | 52561..53802 | + | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE09_RS23175 (LOE09_23165) | 53846..57001 | - | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE09_RS23180 (LOE09_23170) | 56998..58434 | - | 1437 | WP_067293091.1 | Cation efflux system protein CusB | VF |
| LOE09_RS23185 (LOE09_23175) | 58431..58829 | - | 399 | WP_067293094.1 | FixH family protein | - |
| LOE09_RS23190 (LOE09_23180) | 59356..61683 | - | 2328 | WP_111550081.1 | Copper-transporting P-type ATPase | VF |
| LOE09_RS23195 (LOE09_23185) | 61900..64251 | + | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE09_RS23200 (LOE09_23190) | 64313..64813 | + | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE09_RS23205 (LOE09_23195) | 64839..65003 | - | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE09_RS23210 (LOE09_23200) | 65000..66535 | - | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE09_RS23215 (LOE09_23205) | 66542..67018 | - | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE09_RS23220 (LOE09_23210) | 67022..67804 | - | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE09_RS23225 (LOE09_23215) | 67815..68267 | - | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE09_RS23230 (LOE09_23220) | 68288..69604 | - | 1317 | WP_229940656.1 | M23 family metallopeptidase | - |
| LOE09_RS23235 (LOE09_23225) | 69634..70254 | - | 621 | WP_224557759.1 | SCO family protein | - |
| LOE09_RS23240 (LOE09_23230) | 70266..70697 | - | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE09_RS23245 (LOE09_23235) | 70768..71430 | - | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE09_RS23250 (LOE09_23240) | 71427..71870 | - | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE09_RS23255 (LOE09_23245) | 71867..72406 | - | 540 | WP_223865966.1 | SCO family protein | - |
| LOE09_RS23260 (LOE09_23250) | 72654..73082 | + | 429 | WP_224557734.1 | IS607 family transposase ISChh1 | Transposase |
| LOE09_RS23265 (LOE09_23255) | 73079..73405 | + | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE09_RS23270 (LOE09_23260) | 73519..74136 | + | 618 | WP_024099354.1 | cation transporter | - |
| LOE09_RS23275 (LOE09_23265) | 74223..74993 | + | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE09_RS23280 (LOE09_23270) | 74983..75891 | + | 909 | Protein_72 | cation diffusion facilitator family transporter | - |
| LOE09_RS23285 (LOE09_23275) | 75884..76441 | + | 558 | WP_040652314.1 | methyltransferase | - |
| LOE09_RS23290 (LOE09_23280) | 76550..77140 | + | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE09_RS23295 (LOE09_23285) | 77158..77427 | + | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE09_RS23300 (LOE09_23290) | 77511..78176 | - | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE09_RS23305 (LOE09_23295) | 78431..79588 | - | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
| LOE09_RS23310 (LOE09_23300) | 79809..80462 | - | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE09_RS23315 (LOE09_23305) | 80548..80817 | - | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE09_RS23320 (LOE09_23310) | 81015..81356 | + | 342 | WP_224557973.1 | hypothetical protein | - |
| LOE09_RS23325 (LOE09_23315) | 81406..81987 | + | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE09_RS23330 (LOE09_23320) | 81984..82268 | + | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE09_RS23335 (LOE09_23325) | 82292..82567 | + | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE09_RS23340 (LOE09_23330) | 82668..84926 | + | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE09_RS23345 (LOE09_23335) | 85092..86180 | + | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE09_RS23350 (LOE09_23340) | 86170..86979 | + | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE09_RS23355 (LOE09_23345) | 86983..87471 | + | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE09_RS23360 (LOE09_23350) | 87471..88472 | + | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE09_RS23365 (LOE09_23355) | 88475..89119 | + | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE09_RS23370 (LOE09_23360) | 89123..89854 | + | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE09_RS23375 (LOE09_23365) | 89857..91314 | + | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE09_RS23380 (LOE09_23370) | 91425..92414 | + | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE09_RS23385 (LOE09_23375) | 92562..92810 | + | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE09_RS23390 (LOE09_23380) | 92814..93236 | + | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE09_RS23395 (LOE09_23385) | 93233..95983 | + | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE09_RS23400 (LOE09_23390) | 95980..97038 | + | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE09_RS23405 (LOE09_23395) | 97218..98672 | + | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE09_RS23410 (LOE09_23400) | 98848..99174 | + | 327 | Protein_98 | DEAD/DEAH box helicase family protein | - |
| LOE09_RS23415 (LOE09_23405) | 99235..99897 | + | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE09_RS23420 (LOE09_23410) | 100016..100597 | + | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE09_RS23425 (LOE09_23415) | 100624..102009 | + | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE09_RS23430 (LOE09_23420) | 102064..102261 | + | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE09_RS23440 (LOE09_23430) | 103827..104837 | - | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE09_RS23445 (LOE09_23435) | 104936..108403 | - | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE09_RS23450 (LOE09_23440) | 108467..108997 | + | 531 | WP_224557955.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE09_RS23455 (LOE09_23445) | 109016..109816 | - | 801 | WP_284145095.1 | zinc-binding dehydrogenase | - |
| LOE09_RS23465 (LOE09_23455) | 111791..112816 | + | 1026 | WP_229942672.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE09_RS23470 (LOE09_23460) | 112813..115041 | + | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE09_RS23475 (LOE09_23465) | 115325..116353 | + | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE09_RS23480 (LOE09_23470) | 116673..117597 | + | 925 | Protein_112 | IS5 family transposase ISUnCu15 | Transposase |
| LOE09_RS23485 (LOE09_23475) | 117600..117812 | - | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE09_RS23490 (LOE09_23480) | 117809..118345 | - | 537 | WP_229940780.1 | hypothetical protein | - |
| LOE09_RS23495 (LOE09_23485) | 118342..120642 | - | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE09_RS23500 (LOE09_23490) | 120639..121610 | - | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE09_RS23505 (LOE09_23495) | 121634..122158 | - | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE09_RS23510 (LOE09_23500) | 122155..122682 | - | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE09_RS23515 (LOE09_23505) | 122679..123158 | - | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE09_RS23520 (LOE09_23510) | 123167..123739 | - | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE09_RS23525 (LOE09_23515) | 123741..124292 | - | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE09_RS23530 (LOE09_23520) | 124429..124911 | + | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE09_RS23535 (LOE09_23525) | 124908..126245 | + | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE09_RS23540 (LOE09_23530) | 126242..127207 | + | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE09_RS23545 (LOE09_23535) | 127282..127707 | - | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE09_RS23550 (LOE09_23540) | 127833..128852 | + | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE09_RS23555 (LOE09_23545) | 129207..130067 | - | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE09_RS23560 (LOE09_23550) | 130224..130943 | + | 720 | WP_229991871.1 | hypothetical protein | - |
| LOE09_RS23565 (LOE09_23555) | 131144..131563 | - | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE09_RS23570 (LOE09_23560) | 131624..132255 | + | 632 | Protein_130 | IS3 family transposase ISPko4 | Transposase |
| LOE09_RS23575 (LOE09_23565) | 132321..133078 | + | 758 | WP_156127956.1 | IS5 family transposase IS1248A | Transposase |
| LOE09_RS23580 (LOE09_23570) | 133145..134062 | - | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE09_RS23585 (LOE09_23575) | 134072..135301 | - | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE09_RS23590 (LOE09_23580) | 135298..135783 | - | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE09_RS23595 (LOE09_23585) | 135794..137029 | - | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE09_RS23600 (LOE09_23590) | 137026..137520 | - | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE09_RS23605 (LOE09_23595) | 137517..138860 | - | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE09_RS23610 (LOE09_23600) | 138850..140130 | - | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE09_RS23615 (LOE09_23605) | 140130..140675 | - | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE09_RS23620 (LOE09_23610) | 140741..141739 | - | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE09_RS23625 (LOE09_23615) | 141888..142808 | - | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE09_RS23630 (LOE09_23620) | 142839..143558 | - | 720 | WP_229939243.1 | LysR substrate-binding domain-containing protein | - |
| LOE09_RS23635 (LOE09_23625) | 143499..143945 | + | 447 | Protein_143 | IS6 family transposase | - |
| LOE09_RS23640 (LOE09_23630) | 143922..146591 | - | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE09_RS23645 (LOE09_23635) | 146817..147926 | - | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE09_RS23650 (LOE09_23640) | 148028..148408 | - | 381 | Protein_146 | hypothetical protein | - |
| LOE09_RS23655 (LOE09_23645) | 148585..148878 | + | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE09_RS23660 (LOE09_23650) | 149401..150102 | - | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE09_RS23665 (LOE09_23655) | 150099..150500 | - | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE09_RS23670 (LOE09_23660) | 150559..151203 | - | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE09_RS23675 (LOE09_23665) | 151196..151615 | - | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE09_RS23680 (LOE09_23670) | 151691..151888 | - | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE09_RS23685 (LOE09_23675) | 151890..152267 | - | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE09_RS23690 (LOE09_23680) | 152278..152769 | - | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE09_RS23695 (LOE09_23685) | 152873..153391 | - | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE09_RS23700 (LOE09_23690) | 153501..153941 | - | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE09_RS23705 (LOE09_23695) | 154069..155268 | - | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE09_RS23710 (LOE09_23700) | 155406..156311 | - | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE09_RS23715 (LOE09_23705) | 156351..156947 | + | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE09_RS23720 (LOE09_23710) | 157002..157406 | - | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|