MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111867 bp
Accession: NZ_CP086980 Location: 1..111867 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P1
Accession: NZ_CP086980 Location: 1..111867 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE09_RS19270 (LOE09_19265) | 370..2352 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE09_RS19275 (LOE09_19270) | 2820..3852 | - | 1033 | Protein_2 | IS110 family transposase ISRhru3 | Transposase |
| LOE09_RS19280 (LOE09_19275) | 4067..4456 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE09_RS19285 (LOE09_19280) | 4544..4816 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE09_RS19290 (LOE09_19285) | 4840..5778 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE09_RS19295 (LOE09_19290) | 5819..6289 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE09_RS19300 (LOE09_19295) | 6642..6935 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE09_RS19305 (LOE09_19300) | 6964..7125 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE09_RS19310 (LOE09_19305) | 7261..7962 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE09_RS19315 (LOE09_19310) | 7959..9866 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE09_RS19320 (LOE09_19315) | 9872..10852 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE09_RS19325 (LOE09_19320) | 10833..13040 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE09_RS19330 (LOE09_19325) | 13052..13522 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE09_RS19335 (LOE09_19330) | 13558..13938 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE09_RS19340 (LOE09_19335) | 14119..15504 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE09_RS19345 (LOE09_19340) | 15461..15778 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE09_RS19350 (LOE09_19345) | 15924..16583 | + | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE09_RS19355 (LOE09_19350) | 16580..17947 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE09_RS19360 (LOE09_19355) | 18104..19865 | - | 1762 | Protein_19 | ParB N-terminal domain-containing protein | - |
| LOE09_RS19365 (LOE09_19360) | 20034..21245 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE09_RS19370 (LOE09_19365) | 21459..22391 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE09_RS19375 (LOE09_19370) | 22375..23568 | - | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE09_RS19380 (LOE09_19375) | 23777..24004 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE09_RS19385 (LOE09_19380) | 23994..24389 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE09_RS19390 (LOE09_19385) | 24468..24959 | - | 492 | Protein_25 | recombinase family protein | - |
| LOE09_RS19395 (LOE09_19390) | 25061..26200 | - | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE09_RS19400 (LOE09_19395) | 26327..27211 | + | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE09_RS19405 (LOE09_19400) | 27259..27870 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE09_RS19410 (LOE09_19405) | 28894..29760 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE09_RS19415 (LOE09_19410) | 29777..31411 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE09_RS19420 (LOE09_19415) | 31572..32570 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE09_RS19425 (LOE09_19420) | 32898..34079 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE09_RS19430 (LOE09_19425) | 34076..35074 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE09_RS19435 (LOE09_19430) | 35401..35853 | + | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE09_RS19440 (LOE09_19435) | 35848..36297 | - | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE09_RS19445 (LOE09_19440) | 36459..37904 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE09_RS19450 (LOE09_19445) | 37922..38851 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE09_RS19455 (LOE09_19450) | 38851..39345 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE09_RS19460 (LOE09_19455) | 39407..39859 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE09_RS19465 (LOE09_19460) | 40151..40813 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE09_RS19470 (LOE09_19465) | 40861..41145 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE09_RS19475 (LOE09_19470) | 41328..43682 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE09_RS19480 (LOE09_19475) | 43717..43983 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE09_RS19485 (LOE09_19480) | 44166..44678 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE09_RS19490 (LOE09_19485) | 44898..45899 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE09_RS19495 (LOE09_19490) | 45896..47797 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE09_RS19500 (LOE09_19495) | 47858..48025 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE09_RS19505 (LOE09_19500) | 48016..49629 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE09_RS19510 (LOE09_19505) | 49596..50054 | - | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE09_RS19515 (LOE09_19510) | 50083..50865 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE09_RS19520 (LOE09_19515) | 50878..51333 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE09_RS19525 (LOE09_19520) | 51337..52710 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE09_RS19530 (LOE09_19525) | 52707..53333 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE09_RS19535 (LOE09_19530) | 53333..53800 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE09_RS19540 (LOE09_19535) | 53824..54483 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE09_RS19545 (LOE09_19540) | 54480..54902 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE09_RS19550 (LOE09_19545) | 54908..55474 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE09_RS19555 (LOE09_19550) | 55682..56110 | + | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE09_RS19560 (LOE09_19555) | 56214..56792 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE09_RS19565 (LOE09_19560) | 56889..57644 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE09_RS19570 (LOE09_19565) | 57634..58599 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE09_RS19575 (LOE09_19570) | 58741..58941 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE09_RS19580 (LOE09_19575) | 58938..59429 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE09_RS19585 (LOE09_19580) | 59426..60166 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE09_RS19590 (LOE09_19585) | 60267..61031 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE09_RS19595 (LOE09_19590) | 61054..61926 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE09_RS19600 (LOE09_19595) | 62050..62469 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE09_RS19605 (LOE09_19600) | 62489..64996 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE09_RS19610 (LOE09_19605) | 65137..65337 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE09_RS19615 (LOE09_19610) | 65536..65958 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE09_RS19620 (LOE09_19615) | 66253..67716 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE09_RS19625 (LOE09_19620) | 67728..69086 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE09_RS19630 (LOE09_19625) | 69134..69784 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE09_RS19635 (LOE09_19630) | 69768..70550 | + | 783 | Protein_74 | LysR family transcriptional regulator | - |
| LOE09_RS19640 (LOE09_19635) | 70668..72668 | - | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE09_RS19645 (LOE09_19640) | 72677..75010 | - | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE09_RS19650 (LOE09_19645) | 74997..75554 | - | 558 | WP_224557513.1 | transposase | - |
| LOE09_RS19655 (LOE09_19650) | 76107..76313 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE09_RS19660 (LOE09_19655) | 76852..77781 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE09_RS19665 (LOE09_19660) | 78687..79730 | + | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE09_RS19670 (LOE09_19665) | 80057..80773 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE09_RS19675 (LOE09_19670) | 80809..81576 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE09_RS19680 (LOE09_19675) | 81865..82143 | + | 279 | Protein_83 | IS1595 family transposase ISOan10 | Transposase |
| LOE09_RS19685 (LOE09_19680) | 82304..83749 | + | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE09_RS19690 (LOE09_19685) | 83746..84360 | + | 615 | Protein_85 | IS21 family transposase ISPve1 | Transposase |
| LOE09_RS19695 (LOE09_19690) | 84440..86038 | + | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE09_RS19700 (LOE09_19695) | 86048..86842 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE09_RS19705 (LOE09_19700) | 86839..88842 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE09_RS19710 (LOE09_19705) | 88839..90005 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE09_RS19715 (LOE09_19710) | 90325..90825 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE09_RS19720 (LOE09_19715) | 90988..92190 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE09_RS19725 (LOE09_19720) | 92219..93505 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE09_RS19730 (LOE09_19725) | 93502..94017 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE09_RS19735 (LOE09_19730) | 94083..94850 | + | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE09_RS19740 (LOE09_19735) | 94847..95173 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE09_RS19745 (LOE09_19740) | 95148..95849 | + | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE09_RS19750 (LOE09_19745) | 95904..97070 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE09_RS19755 (LOE09_19750) | 97097..97969 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE09_RS19760 (LOE09_19755) | 97962..99020 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE09_RS19765 (LOE09_19760) | 99017..99817 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE09_RS19770 (LOE09_19765) | 99810..100616 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE09_RS19775 (LOE09_19770) | 100624..101478 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE09_RS19780 (LOE09_19775) | 101511..102365 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE09_RS19785 (LOE09_19780) | 102463..103464 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE09_RS19790 (LOE09_19785) | 103503..104291 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE09_RS19795 (LOE09_19790) | 104296..105231 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE09_RS19800 (LOE09_19795) | 105228..106268 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE09_RS19805 (LOE09_19800) | 106265..107086 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE09_RS19810 (LOE09_19805) | 107267..107659 | - | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE09_RS19820 (LOE09_19815) | 109034..109315 | + | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE09_RS19825 (LOE09_19820) | 109854..110371 | - | 518 | Protein_112 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE09_RS19830 (LOE09_19825) | 110368..110694 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE09_RS19835 (LOE09_19830) | 110818..111471 | - | 654 | WP_067296481.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|