MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82227 bp
Accession: NZ_CP086943 Location: 1..82227 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P5
Accession: NZ_CP086943 Location: 1..82227 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE15_RS21380 (LOE15_21335) | 641..1651 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE15_RS21385 (LOE15_21340) | 1788..3224 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE15_RS21390 (LOE15_21345) | 3221..4810 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE15_RS21395 (LOE15_21350) | 5385..6140 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE15_RS21400 (LOE15_21355) | 6253..6960 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE15_RS21405 (LOE15_21360) | 6957..7643 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE15_RS21410 (LOE15_21365) | 7852..9687 | - | 1836 | WP_224557579.1 | HipA domain-containing protein | - |
| LOE15_RS21415 (LOE15_21370) | 9856..11379 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE15_RS21420 (LOE15_21375) | 11509..12465 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE15_RS21425 (LOE15_21380) | 12874..13740 | - | 867 | WP_224557575.1 | RNA polymerase sigma factor SigJ | - |
| LOE15_RS21430 (LOE15_21385) | 13752..14054 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE15_RS21435 (LOE15_21390) | 14144..15076 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE15_RS21440 (LOE15_21395) | 15245..16309 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE15_RS21445 (LOE15_21400) | 16391..17911 | + | 1521 | WP_224557571.1 | sugar ABC transporter ATP-binding protein | - |
| LOE15_RS21450 (LOE15_21405) | 17924..19120 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE15_RS21455 (LOE15_21410) | 19133..20875 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE15_RS21460 (LOE15_21415) | 20875..21801 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE15_RS21465 (LOE15_21420) | 21838..22755 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE15_RS21470 (LOE15_21425) | 22844..23404 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE15_RS21475 (LOE15_21430) | 23401..24456 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase | - |
| LOE15_RS21480 (LOE15_21435) | 24453..25331 | + | 879 | WP_224557563.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| LOE15_RS21485 (LOE15_21440) | 25622..26317 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE15_RS21490 (LOE15_21445) | 26516..27694 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE15_RS21495 (LOE15_21450) | 27694..29010 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE15_RS21500 (LOE15_21455) | 29027..30574 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE15_RS21505 (LOE15_21460) | 30666..31436 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE15_RS21510 (LOE15_21465) | 31905..32180 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE15_RS21515 (LOE15_21470) | 32173..32466 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE15_RS21520 (LOE15_21475) | 32537..33442 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE15_RS21525 (LOE15_21480) | 33453..35192 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE15_RS21530 (LOE15_21485) | 35454..36989 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE15_RS21535 (LOE15_21490) | 36995..37969 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE15_RS21540 (LOE15_21495) | 38033..39247 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE15_RS21545 (LOE15_21500) | 39349..39987 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE15_RS21550 (LOE15_21505) | 40047..40475 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE15_RS21555 (LOE15_21510) | 40706..41635 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE15_RS21560 (LOE15_21515) | 41622..41927 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE15_RS21565 (LOE15_21520) | 42056..42289 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE15_RS21570 (LOE15_21525) | 42628..43446 | + | 819 | Protein_39 | GTP-binding protein | - |
| LOE15_RS21575 (LOE15_21530) | 43525..44111 | - | 587 | Protein_40 | recombinase family protein | - |
| LOE15_RS21580 (LOE15_21535) | 44277..47165 | + | 2889 | Protein_41 | Tn3 family transposase | - |
| LOE15_RS21585 (LOE15_21540) | 47274..48383 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE15_RS21590 (LOE15_21545) | 48380..49309 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE15_RS21595 (LOE15_21550) | 49353..50117 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE15_RS21600 (LOE15_21555) | 50114..51562 | + | 1449 | WP_224557609.1 | ATP-binding cassette domain-containing protein | - |
| LOE15_RS21605 (LOE15_21560) | 51593..51910 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE15_RS21610 (LOE15_21565) | 51920..52636 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE15_RS21615 (LOE15_21570) | 52652..53347 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE15_RS21620 (LOE15_21575) | 53340..54125 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE15_RS21625 (LOE15_21580) | 54122..54874 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE15_RS21630 (LOE15_21585) | 55141..56103 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE15_RS21635 (LOE15_21590) | 56189..58063 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE15_RS21640 (LOE15_21595) | 58085..59770 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE15_RS21645 (LOE15_21600) | 59796..61238 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE15_RS21650 (LOE15_21605) | 61262..61891 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE15_RS21655 (LOE15_21610) | 62307..63980 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE15_RS21660 (LOE15_21615) | 63989..64696 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE15_RS21665 (LOE15_21620) | 64835..67561 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE15_RS21670 (LOE15_21625) | 67531..68577 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE15_RS21675 (LOE15_21630) | 68583..70556 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE15_RS21680 (LOE15_21635) | 70717..71280 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE15_RS21685 (LOE15_21640) | 71568..72155 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE15_RS21690 (LOE15_21645) | 72313..73767 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE15_RS21695 (LOE15_21650) | 73809..75134 | - | 1326 | WP_224557594.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE15_RS21700 (LOE15_21655) | 75131..75826 | - | 696 | WP_224557593.1 | response regulator transcription factor | - |
| LOE15_RS21705 (LOE15_21660) | 75819..77069 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE15_RS21710 (LOE15_21665) | 77260..77880 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE15_RS21715 (LOE15_21670) | 77880..79964 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE15_RS21720 (LOE15_21675) | 80063..81043 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|