MGE detailed information
MGE type: Genomic_island MGE length: 17924 bp
Accession: NZ_CP086662 Location: 3645542..3663465 Organism: Escherichia coli strain E2 Replicon: chromosome
Accession: NZ_CP086662 Location: 3645542..3663465 Organism: Escherichia coli strain E2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE88_RS17410 (3641403) | 3641403..3641609 | + | 207 | WP_039021210.1 | AlpA family transcriptional regulator | - |
| LOE88_RS17415 (3641695) | 3641695..3642267 | + | 573 | WP_063122481.1 | hypothetical protein | - |
| LOE88_RS17420 (3642667) | 3642667..3643283 | + | 617 | Protein_3392 | IS1 family transposase | - |
| LOE88_RS17425 (3644413) | 3644413..3645432 | + | 1020 | WP_071702264.1 | transcriptional regulator | - |
| LOE88_RS17430 (3645542) | 3645542..3646414 | + | 873 | WP_063122478.1 | GTPase family protein | - |
| LOE88_RS17435 (3646788) | 3646788..3648902 | + | 2115 | Protein_3395 | Antigen 43 | VF |
| LOE88_RS17440 (3649299) | 3649299..3650117 | + | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| LOE88_RS17445 (3650208) | 3650208..3650693 | + | 486 | WP_000214317.1 | antirestriction protein | - |
| LOE88_RS17450 (3650708) | 3650708..3651184 | + | 477 | WP_001186747.1 | RadC family protein | - |
| LOE88_RS17455 (3651253) | 3651253..3651474 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| LOE88_RS17460 (3651554) | 3651554..3651922 | + | 369 | WP_053287563.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LOE88_RS17465 (3652012) | 3652012..3652389 | + | 378 | WP_072664810.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| LOE88_RS17470 (3652386) | 3652386..3652874 | + | 489 | WP_001559914.1 | DUF5983 family protein | - |
| LOE88_RS17475 (3652894) | 3652894..3653091 | + | 198 | WP_113433744.1 | DUF957 domain-containing protein | - |
| LOE88_RS17480 (3653176) | 3653176..3653325 | + | 150 | Protein_3404 | hypothetical protein | - |
| LOE88_RS17485 (3654109) | 3654109..3654252 | - | 144 | Protein_3405 | HNH endonuclease | - |
| LOE88_RS17490 (3654389) | 3654389..3655039 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| LOE88_RS17495 (3655047) | 3655047..3656027 | - | 981 | WP_001534123.1 | sialate O-acetylesterase | - |
| LOE88_RS17500 (3656092) | 3656092..3657198 | - | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| LOE88_RS17505 (3657218) | 3657218..3657934 | - | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LOE88_RS17510 (3659388) | 3659388..3659990 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LOE88_RS17515 (3660467) | 3660467..3661063 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| LOE88_RS17520 (3661545) | 3661545..3662099 | + | 555 | WP_000695589.1 | Type-1 fimbrial protein, A chain | VF |
| LOE88_RS17525 (3662164) | 3662164..3662703 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| LOE88_RS17530 (3662740) | 3662740..3663465 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| LOE88_RS17535 (3663532) | 3663532..3666168 | + | 2637 | WP_001534126.1 | fimbrial usher FimD | - |
| LOE88_RS17540 (3666178) | 3666178..3666708 | + | 531 | WP_001244828.1 | type 1 fimbria minor subunit FimF | - |
| LOE88_RS17545 (3666721) | 3666721..3667224 | + | 504 | WP_000870589.1 | type 1 fimbria minor subunit FimG | - |
| LOE88_RS17550 (3667244) | 3667244..3668146 | + | 903 | WP_001297233.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|