MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 51325 bp
Accession: NZ_CP086220 Location: 2986458..3037782 Organism: Escherichia coli strain 779 Replicon: chromosome
Accession: NZ_CP086220 Location: 2986458..3037782 Organism: Escherichia coli strain 779 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMB17_RS14565 (2981749) | 2981749..2983005 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| LMB17_RS14570 (2983055) | 2983055..2985190 | - | 2136 | WP_000839746.1 | ornithine decarboxylase | - |
| LMB17_RS14575 (2985352) | 2985352..2985435 | - | 84 | WP_212591416.1 | hypothetical protein | - |
| LMB17_RS14580 (2985588) | 2985588..2986295 | + | 708 | WP_000234522.1 | DUF554 domain-containing protein | - |
| LMB17_RS14590 (2986653) | 2986653..2987837 | + | 1185 | WP_001218742.1 | Prophage integrase IntS ; Integrase | Integrase |
| LMB17_RS14595 (2987987) | 2987987..2988997 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| LMB17_RS14600 (2989093) | 2989093..2991219 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| LMB17_RS14605 (2991282) | 2991282..2992559 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| LMB17_RS14610 (2992559) | 2992559..2993989 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| LMB17_RS14615 (2994184) | 2994184..2995578 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| LMB17_RS14620 (2996156) | 2996156..2996458 | - | 303 | Protein_2867 | IS3 family transposase IS2 | Transposase |
| LMB17_RS14625 (2996518) | 2996518..2996793 | - | 276 | WP_000179213.1 | IS1 family transposase IS1A | Transposase |
| LMB17_RS14630 (2996843) | 2996843..2997877 | + | 1035 | WP_072647277.1 | hypothetical protein | - |
| LMB17_RS14635 (2998236) | 2998236..2999738 | - | 1503 | WP_072644945.1 | phosphoethanolamine transferase | - |
| LMB17_RS14640 (2999913) | 2999913..3000659 | - | 747 | WP_001385633.1 | invasion outer membrane protein Tia | - |
| LMB17_RS14645 (3000888) | 3000888..3001067 | + | 180 | Protein_2872 | integrase | - |
| LMB17_RS14650 (3001384) | 3001384..3002565 | - | 1182 | Protein_2873 | phosphoethanolamine transferase | - |
| LMB17_RS14655 (3003152) | 3003152..3003381 | + | 230 | Protein_2874 | transposase domain-containing protein | - |
| LMB17_RS14660 (3003724) | 3003724..3003867 | + | 144 | WP_000050905.1 | hypothetical protein | - |
| LMB17_RS14665 (3004412) | 3004412..3005629 | + | 1218 | WP_000179692.1 | MFS transporter | - |
| LMB17_RS14670 (3005641) | 3005641..3006759 | + | 1119 | WP_021541778.1 | 2,7-anhydro-N-acetylneuraminate hydratase | - |
| LMB17_RS14675 (3006802) | 3006802..3006927 | + | 126 | WP_000594406.1 | protein YthA | - |
| LMB17_RS14680 (3007213) | 3007213..3008402 | + | 1190 | Protein_2879 | IS3 family transposase | - |
| LMB17_RS14685 (3008605) | 3008605..3010152 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| LMB17_RS14690 (3010152) | 3010152..3015110 | - | 4959 | WP_000877066.1 | AAA domain-containing protein | - |
| LMB17_RS14695 (3015318) | 3015318..3015473 | + | 156 | Protein_2882 | integrase | - |
| LMB17_RS14700 (3015510) | 3015510..3016124 | - | 615 | Protein_2883 | IS3 family transposase ISEc48 | Transposase |
| LMB17_RS14705 (3016312) | 3016312..3016641 | + | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| LMB17_RS14710 (3016628) | 3016628..3017020 | + | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| LMB17_RS14715 (3017027) | 3017027..3017901 | + | 875 | Protein_2886 | IS66 family transposase ISEc49 | Transposase |
| LMB17_RS14720 (3017897) | 3017897..3018706 | - | 810 | Protein_2887 | hypothetical protein | VF |
| LMB17_RS14725 (3018670) | 3018670..3020349 | - | 1680 | Protein_2888 | hypothetical protein | VF |
| LMB17_RS14730 (3020342) | 3020342..3020512 | - | 171 | Protein_2889 | hypothetical protein | - |
| LMB17_RS14735 (3020601) | 3020601..3021101 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| LMB17_RS14740 (3021101) | 3021101..3021394 | - | 294 | WP_238466175.1 | hypothetical protein | - |
| LMB17_RS14745 (3021369) | 3021369..3021599 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| LMB17_RS14750 (3021668) | 3021668..3022228 | - | 561 | WP_077890880.1 | hypothetical protein | - |
| LMB17_RS14755 (3022486) | 3022486..3023052 | - | 567 | WP_072644949.1 | inovirus-type Gp2 protein | - |
| LMB17_RS14760 (3024598) | 3024598..3025302 | + | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LMB17_RS14765 (3025726) | 3025726..3026457 | - | 732 | WP_072644950.1 | inovirus Gp2 family protein | - |
| LMB17_RS14770 (3027944) | 3027944..3029074 | - | 1131 | WP_072644952.1 | hypothetical protein | - |
| LMB17_RS14775 (3029259) | 3029259..3030143 | + | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| LMB17_RS14780 (3030346) | 3030346..3031026 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| LMB17_RS14785 (3031174) | 3031174..3031851 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| LMB17_RS14790 (3031857) | 3031857..3032090 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| LMB17_RS14795 (3032180) | 3032180..3032998 | + | 819 | WP_072644953.1 | DUF932 domain-containing protein | - |
| LMB17_RS14800 (3033080) | 3033080..3033559 | + | 480 | WP_000844100.1 | antirestriction protein | - |
| LMB17_RS14805 (3033575) | 3033575..3034051 | + | 477 | WP_001366855.1 | RadC family protein | - |
| LMB17_RS14810 (3034114) | 3034114..3034335 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| LMB17_RS14815 (3034415) | 3034415..3034789 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LMB17_RS14820 (3034836) | 3034836..3035213 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| LMB17_RS14825 (3035210) | 3035210..3035698 | + | 489 | WP_000761676.1 | DUF5983 family protein | - |
| LMB17_RS14830 (3035710) | 3035710..3035907 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| LMB17_RS14835 (3035992) | 3035992..3036858 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| LMB17_RS14840 (3036930) | 3036930..3037193 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LMB17_RS14845 (3037190) | 3037190..3037516 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMB17_RS14850 (3037980) | 3037980..3039242 | + | 1263 | WP_001218875.1 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|