MGE detailed information
MGE type: Prophage MGE length: 59707 bp
Accession: NZ_CP085823 Location: 54781..114487 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Venusaur Replicon: chromosome
Accession: NZ_CP085823 Location: 54781..114487 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Venusaur Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF47_RS00255 () | 51054..51695 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF47_RS00260 () | 51795..52973 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF47_RS00265 () | 53104..53394 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF47_RS00270 () | 53462..53815 | + | 354 | WP_001042123.1 | protein YebF | - |
| LJF47_RS00275 () | 53909..54568 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF47_RS00280 () | 54781..56832 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF47_RS00285 () | 56869..57567 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF47_RS00290 () | 57591..58247 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF47_RS00295 () | 58355..58585 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF47_RS00300 () | 58723..59097 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF47_RS00305 () | 59098..59973 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF47_RS00310 () | 59990..60343 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 60443..60588 | - | 146 | - | - | Antitoxin Detail |
| - | 60483..60586 | + | 104 | - | - | Toxin Detail |
| LJF47_RS00315 () | 60726..61805 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| LJF47_RS00320 () | 61780..62058 | - | 279 | WP_001575998.1 | excisionase | - |
| LJF47_RS00325 () | 62472..64451 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF47_RS00330 () | 64770..64868 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF47_RS00335 () | 65170..65388 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF47_RS00340 () | 65452..66051 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF47_RS22815 () | 66054..66275 | + | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF47_RS00350 () | 66272..66408 | + | 137 | Protein_69 | YlcG family protein | - |
| LJF47_RS00355 () | 66405..67094 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF47_RS00360 () | 67188..67715 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF47_RS00365 () | 68089..68538 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF47_RS00370 () | 68899..69585 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF47_RS00375 () | 69861..70190 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF47_RS00380 () | 70174..70626 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF47_RS22775 () | 70644..71123 | + | 480 | WP_001541990.1 | lysis protein | - |
| LJF47_RS00395 () | 71331..71642 | + | 312 | Protein_77 | DUF1441 family protein | - |
| LJF47_RS00400 () | 71674..71901 | + | 228 | Protein_78 | outer membrane beta-barrel protein | - |
| LJF47_RS00405 () | 72018..72551 | - | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF47_RS00410 () | 72641..73336 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF47_RS00415 () | 73346..73606 | + | 261 | Protein_81 | C40 family peptidase | - |
| LJF47_RS00420 () | 73606..75937 | + | 2332 | Protein_82 | host specificity protein J | - |
| LJF47_RS00425 () | 76007..76840 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| LJF47_RS00430 () | 76845..77189 | + | 345 | Protein_84 | tail fiber assembly protein | - |
| LJF47_RS00435 () | 77391..78113 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF47_RS00440 () | 78323..78564 | + | 242 | Protein_86 | recombinase family protein | - |
| LJF47_RS00445 () | 78593..79393 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF47_RS00450 () | 80338..81260 | - | 923 | Protein_88 | hypothetical protein ; Integrase | Integrase |
| LJF47_RS00455 () | 81524..81985 | - | 462 | Protein_89 | DNA breaking-rejoining protein | - |
| LJF47_RS00460 () | 81974..82165 | + | 192 | Protein_90 | glycoside hydrolase family 19 protein | - |
| LJF47_RS00465 () | 82219..82752 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF47_RS00470 () | 83009..83176 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF47_RS00475 () | 83241..83429 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF47_RS00480 () | 83484..83975 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF47_RS00485 () | 83962..84529 | + | 568 | Protein_95 | phage terminase large subunit family protein | - |
| LJF47_RS00490 () | 84528..85759 | + | 1232 | Protein_96 | tail fiber protein | - |
| LJF47_RS22780 () | 85769..86056 | + | 288 | Protein_97 | macro domain-containing protein | - |
| LJF47_RS00495 () | 86069..86580 | + | 512 | Protein_98 | tail fiber assembly protein | - |
| LJF47_RS00500 () | 86677..86877 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF47_RS00505 () | 87267..87447 | - | 181 | Protein_100 | IS3 family transposase | - |
| LJF47_RS00510 () | 87438..87539 | + | 102 | Protein_101 | arsenic transporter | - |
| LJF47_RS00515 () | 88148..88380 | + | 233 | Protein_102 | helix-turn-helix domain-containing protein | - |
| LJF47_RS00520 () | 88707..89321 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF47_RS00525 () | 89331..89489 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF47_RS00530 () | 89622..90536 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF47_RS00535 () | 91786..92252 | - | 467 | Protein_106 | tyrosine-type recombinase/integrase | - |
| LJF47_RS00540 () | 92322..93529 | + | 1208 | Protein_107 | IS256 family transposase ISEc39 | Transposase |
| LJF47_RS00545 () | 93675..93815 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF47_RS00550 () | 93981..94250 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF47_RS00555 () | 94623..95042 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF47_RS00560 () | 95415..95891 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF47_RS00565 () | 96221..96616 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF47_RS00570 () | 97300..98022 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF47_RS00575 () | 98307..98471 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJF47_RS00580 () | 98695..99345 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF47_RS00585 () | 99364..99555 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF47_RS00590 () | 99666..99902 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJF47_RS00595 () | 100020..101459 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF47_RS00600 () | 101537..104170 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF47_RS00605 () | 104139..105422 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF47_RS00610 () | 105551..106048 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF47_RS00615 () | 106146..106832 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF47_RS00620 () | 106852..108900 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF47_RS00625 () | 109094..109975 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LJF47_RS00630 () | 110023..111396 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF47_RS00635 () | 111572..112363 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF47_RS00640 () | 112575..112814 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF47_RS00645 () | 112972..113115 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF47_RS00650 () | 113186..113473 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LJF47_RS00655 () | 114122..114265 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF47_RS00660 () | 114278..114487 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF47_RS00665 () | 114707..116452 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF47_RS00670 () | 116518..117327 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF47_RS00675 () | 117324..117890 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF47_RS00680 () | 118300..118758 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|