MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP085806 Location: 3565071..3575681 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Marill Replicon: chromosome
Accession: NZ_CP085806 Location: 3565071..3575681 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Marill Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF46_RS17425 (3561017) | 3561017..3561472 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF46_RS17430 (3561614) | 3561614..3562843 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF46_RS17435 (3562874) | 3562874..3563146 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF46_RS17440 (3563268) | 3563268..3564116 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF46_RS17445 (3564326) | 3564326..3565084 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF46_RS17450 (3565071) | 3565071..3565583 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF46_RS17455 (3565727) | 3565727..3566803 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF46_RS17460 (3566800) | 3566800..3567543 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF46_RS17465 (3567584) | 3567584..3570067 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF46_RS17470 (3570187) | 3570187..3570768 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF46_RS17475 (3571487) | 3571487..3572119 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF46_RS17480 (3572166) | 3572166..3572702 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF46_RS17485 (3573510) | 3573510..3573908 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF46_RS17490 (3573908) | 3573908..3574135 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF46_RS17495 (3574344) | 3574344..3574595 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF46_RS17500 (3574875) | 3574875..3575681 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF46_RS17510 (3575966) | 3575966..3576724 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF46_RS17515 (3576989) | 3576989..3577534 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF46_RS17520 (3577610) | 3577610..3579127 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |