MGE detailed information
MGE type: Genomic_island MGE length: 72509 bp
Accession: NZ_CP085056 Location: 3634163..3706671 Organism: Escherichia coli strain P24_WM1_05.20 Replicon: chromosome
Accession: NZ_CP085056 Location: 3634163..3706671 Organism: Escherichia coli strain P24_WM1_05.20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHK10_RS17655 (3629710) | 3629710..3630405 | - | 696 | WP_001323770.1 | lactate utilization protein C | - |
| LHK10_RS17660 (3630398) | 3630398..3631825 | - | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LHK10_RS17665 (3631836) | 3631836..3632555 | - | 720 | WP_001102099.1 | (Fe-S)-binding protein | - |
| LHK10_RS17670 (3633083) | 3633083..3633937 | - | 855 | WP_000339586.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LHK10_RS17675 (3634163) | 3634163..3635488 | + | 1326 | WP_001046317.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LHK10_RS17680 (3635597) | 3635597..3635833 | + | 237 | WP_000474091.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LHK10_RS17685 (3635845) | 3635845..3636438 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| LHK10_RS17690 (3636598) | 3636598..3636726 | - | 129 | Protein_3457 | aldo/keto reductase | - |
| LHK10_RS17695 (3637029) | 3637029..3637880 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| LHK10_RS17700 (3638020) | 3638020..3642276 | - | 4257 | WP_000020229.1 | Invasin | VF |
| LHK10_RS17705 (3642828) | 3642828..3642917 | + | 90 | Protein_3460 | hypothetical protein | - |
| LHK10_RS17710 (3643391) | 3643391..3643492 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| LHK10_RS17715 (3643856) | 3643856..3644119 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LHK10_RS17720 (3644119) | 3644119..3644259 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LHK10_RS17725 (3644294) | 3644294..3644521 | - | 228 | WP_001147279.1 | protein YkgL | - |
| LHK10_RS17730 (3645344) | 3645344..3645886 | + | 543 | WP_001323479.1 | HTH-type transcriptional regulator EcpR | VF |
| LHK10_RS17735 (3645961) | 3645961..3646548 | + | 588 | WP_000730974.1 | Common pilus major fimbrillin subunit EcpA | VF |
| LHK10_RS17740 (3646606) | 3646606..3647274 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| LHK10_RS17745 (3647300) | 3647300..3649825 | + | 2526 | WP_001131091.1 | putative outer membrane usher protein EcpC | VF |
| LHK10_RS17750 (3649815) | 3649815..3651458 | + | 1644 | WP_001323478.1 | Fimbria adhesin EcpD | VF |
| LHK10_RS17755 (3651427) | 3651427..3652137 | + | 711 | WP_001305432.1 | putative fimbrial chaperone EcpE | VF |
| LHK10_RS17760 (3652450) | 3652450..3652779 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| LHK10_RS17765 (3653027) | 3653027..3653641 | - | 615 | WP_001019920.1 | YagU family protein | - |
| LHK10_RS17770 (3654059) | 3654059..3654748 | + | 690 | WP_000070694.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| LHK10_RS17775 (3654745) | 3654745..3655701 | + | 957 | WP_000643336.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| LHK10_RS17780 (3655698) | 3655698..3657896 | + | 2199 | WP_000667031.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| LHK10_RS17785 (3657906) | 3657906..3658862 | + | 957 | WP_000121355.1 | molybdenum cofactor insertion chaperone PaoD | - |
| LHK10_RS17790 (3658913) | 3658913..3659251 | + | 339 | Protein_3477 | LysR substrate-binding domain-containing protein | - |
| LHK10_RS17795 (3659589) | 3659589..3660908 | + | 1320 | WP_000144688.1 | Prophage integrase IntA ; Integrase | Integrase |
| LHK10_RS17800 (3661001) | 3661001..3661288 | - | 288 | Protein_3479 | DUF4942 domain-containing protein | - |
| LHK10_RS17805 (3661570) | 3661570..3662574 | - | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| LHK10_RS17810 (3662646) | 3662646..3663206 | - | 561 | Protein_3481 | DUF4942 domain-containing protein | - |
| LHK10_RS17815 (3663303) | 3663303..3663500 | - | 198 | WP_061091469.1 | DUF957 domain-containing protein | - |
| LHK10_RS17820 (3663520) | 3663520..3663669 | - | 150 | Protein_3483 | DUF5983 family protein | - |
| LHK10_RS17825 (3663749) | 3663749..3664666 | + | 918 | WP_000520337.1 | IS5 family transposase ISEc35 | Transposase |
| LHK10_RS17830 (3664640) | 3664640..3665068 | - | 429 | Protein_3485 | DUF5983 family protein | - |
| LHK10_RS17835 (3665065) | 3665065..3665442 | - | 378 | WP_061091468.1 | TA system toxin CbtA family protein | Toxin Detail |
| LHK10_RS17840 (3665489) | 3665489..3665866 | - | 378 | WP_032215284.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LHK10_RS17845 (3666029) | 3666029..3666250 | - | 222 | WP_000692307.1 | DUF987 domain-containing protein | - |
| LHK10_RS17850 (3666319) | 3666319..3666795 | - | 477 | WP_001186774.1 | RadC family protein | - |
| LHK10_RS17855 (3666811) | 3666811..3667284 | - | 474 | WP_000855069.1 | antirestriction protein | - |
| LHK10_RS17860 (3667378) | 3667378..3667623 | - | 246 | WP_000680586.1 | hypothetical protein | - |
| LHK10_RS17865 (3667623) | 3667623..3668444 | - | 822 | WP_061091467.1 | DUF932 domain-containing protein | - |
| LHK10_RS17870 (3668812) | 3668812..3669294 | - | 483 | WP_077777324.1 | hypothetical protein | - |
| LHK10_RS17875 (3669655) | 3669655..3670197 | - | 543 | WP_033811096.1 | hypothetical protein | - |
| LHK10_RS17880 (3670330) | 3670330..3671400 | - | 1071 | WP_033811097.1 | hypothetical protein | VF |
| LHK10_RS17885 (3671397) | 3671397..3672302 | - | 906 | WP_000203554.1 | diguanylate cyclase regulator RdcB family protein | - |
| LHK10_RS17890 (3672299) | 3672299..3674683 | - | 2385 | WP_033811099.1 | dynamin family protein | - |
| LHK10_RS17895 (3674901) | 3674901..3675773 | - | 873 | WP_142436564.1 | GTPase family protein | - |
| LHK10_RS17900 (3676037) | 3676037..3677593 | + | 1557 | WP_061091422.1 | type I restriction-modification system subunit M | - |
| LHK10_RS17905 (3677590) | 3677590..3678753 | + | 1164 | WP_061091423.1 | restriction endonuclease subunit S | - |
| LHK10_RS17910 (3678755) | 3678755..3679999 | + | 1245 | WP_061091424.1 | AAA family ATPase | - |
| LHK10_RS17915 (3680001) | 3680001..3683114 | + | 3114 | WP_061091425.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LHK10_RS17920 (3683264) | 3683264..3683581 | + | 318 | WP_000165753.1 | hypothetical protein | - |
| LHK10_RS25400 (3683806) | 3683806..3683931 | - | 126 | WP_001452123.1 | hypothetical protein | - |
| LHK10_RS17925 (3684190) | 3684190..3684600 | - | 411 | WP_024209848.1 | immunity 63 family protein | - |
| LHK10_RS17930 (3684602) | 3684602..3691518 | - | 6917 | Protein_3506 | Toxin CdiA | VF |
| LHK10_RS17935 (3691531) | 3691531..3693297 | - | 1767 | WP_061091446.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| LHK10_RS17940 (3693892) | 3693892..3694785 | + | 894 | WP_024224224.1 | DNA-processing protein DprA | - |
| LHK10_RS17945 (3694782) | 3694782..3695408 | + | 627 | WP_000175354.1 | hypothetical protein | - |
| LHK10_RS17950 (3695601) | 3695601..3697139 | - | 1539 | WP_000998059.1 | IS66 family transposase ISEc8 | Transposase |
| LHK10_RS17955 (3697189) | 3697189..3697536 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LHK10_RS17960 (3697533) | 3697533..3697913 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| LHK10_RS17965 (3698204) | 3698204..3699430 | - | 1227 | WP_061091458.1 | MFS transporter | - |
| LHK10_RS17970 (3699503) | 3699503..3700525 | - | 1023 | WP_000736098.1 | D-chiro-inositol-2-dehydrogenase IolG2 | - |
| LHK10_RS17975 (3700706) | 3700706..3702646 | - | 1941 | WP_000849474.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| LHK10_RS17980 (3703060) | 3703060..3704997 | + | 1938 | WP_012601331.1 | 5-dehydro-2-deoxygluconokinase | - |
| LHK10_RS17985 (3705133) | 3705133..3705480 | + | 348 | WP_000124074.1 | hypothetical protein | - |
| LHK10_RS17990 (3705484) | 3705484..3706671 | + | 1188 | Protein_3518 | IS91 family transposase | - |
| LHK10_RS17995 (3706874) | 3706874..3708040 | + | 1167 | WP_001111173.1 | MFS transporter | - |
| LHK10_RS18000 (3708037) | 3708037..3708870 | - | 834 | WP_000976926.1 | 2-keto-myo-inositol isomerase IolI1 | - |
| LHK10_RS18005 (3708871) | 3708871..3710214 | - | 1344 | WP_000678390.1 | lysosomal glucosyl ceramidase-like type III secretion effector SrfJ | - |
| LHK10_RS18010 (3710312) | 3710312..3711322 | - | 1011 | WP_000172703.1 | inositol 2-dehydrogenase IolG1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|