MGE detailed information
MGE type: Prophage MGE length: 89755 bp
Accession: NZ_CP084740 Location: 4608661..4698415 Organism: Dickeya zeae strain A586-S18-A17 Replicon: chromosome
Accession: NZ_CP084740 Location: 4608661..4698415 Organism: Dickeya zeae strain A586-S18-A17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHK94_RS20340 (LHK94_20345) | 4604396..4605391 | + | 996 | WP_012884832.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| LHK94_RS20345 (LHK94_20350) | 4605558..4606430 | + | 873 | WP_026357943.1 | D-hexose-6-phosphate mutarotase | - |
| LHK94_RS20350 (LHK94_20355) | 4606495..4607346 | - | 852 | WP_226510676.1 | aldo/keto reductase | - |
| LHK94_RS20355 (LHK94_20360) | 4607461..4608210 | - | 750 | WP_226510677.1 | MipA/OmpV family protein | - |
| LHK94_RS20360 (LHK94_20365) | 4608661..4610595 | + | 1935 | WP_012884836.1 | protein kinase YeaG | - |
| LHK94_RS20365 (LHK94_20370) | 4610632..4611909 | + | 1278 | WP_033581676.1 | YeaH/YhbH family protein | - |
| LHK94_RS20370 (LHK94_20375) | 4612003..4612398 | - | 396 | WP_210182755.1 | hypothetical protein | - |
| LHK94_RS20375 (LHK94_20380) | 4612709..4613047 | + | 339 | WP_012884839.1 | YebY family protein | - |
| - | 4613217..4613297 | + | 81 | - | - | Toxin Detail |
| - | 4613217..4613301 | - | 85 | - | - | Antitoxin Detail |
| LHK94_RS20380 (LHK94_20385) | 4614350..4615069 | - | 720 | WP_146214213.1 | hypothetical protein | - |
| LHK94_RS20385 (LHK94_20390) | 4615369..4623309 | - | 7941 | WP_226510678.1 | LPD5 domain-containing protein | - |
| LHK94_RS20390 (LHK94_20395) | 4623672..4623830 | + | 159 | WP_193601440.1 | hypothetical protein | - |
| LHK94_RS20395 (LHK94_20400) | 4624204..4624692 | - | 489 | WP_226510679.1 | hypothetical protein | - |
| LHK94_RS20400 (LHK94_20405) | 4624752..4626092 | - | 1341 | WP_226510680.1 | hypothetical protein | - |
| LHK94_RS20405 (LHK94_20410) | 4626108..4626383 | - | 276 | WP_226510681.1 | bacteriocin | - |
| LHK94_RS20410 (LHK94_20415) | 4626383..4626763 | - | 381 | WP_123252186.1 | hypothetical protein | - |
| LHK94_RS20415 (LHK94_20420) | 4626772..4627449 | - | 678 | WP_226510682.1 | hypothetical protein | - |
| LHK94_RS20420 (LHK94_20425) | 4627458..4627829 | - | 372 | WP_110371993.1 | hypothetical protein | - |
| LHK94_RS20425 (LHK94_20430) | 4627842..4628942 | - | 1101 | WP_226510683.1 | DUF1983 domain-containing protein | - |
| LHK94_RS20430 (LHK94_20435) | 4628939..4630561 | - | 1623 | WP_226510684.1 | hypothetical protein | - |
| LHK94_RS20435 (LHK94_20440) | 4630662..4632344 | - | 1683 | WP_226510685.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LHK94_RS20440 (LHK94_20445) | 4632341..4632988 | - | 648 | WP_226510686.1 | hypothetical protein | - |
| LHK94_RS20445 (LHK94_20450) | 4632988..4633569 | - | 582 | WP_110371980.1 | hypothetical protein | - |
| LHK94_RS20450 (LHK94_20455) | 4633569..4634009 | - | 441 | WP_226510687.1 | hypothetical protein | - |
| LHK94_RS20455 (LHK94_20460) | 4634073..4634456 | - | 384 | WP_226510688.1 | hypothetical protein | - |
| LHK94_RS20460 (LHK94_20465) | 4634512..4635735 | - | 1224 | WP_226510689.1 | N4-gp56 family major capsid protein | - |
| LHK94_RS20465 (LHK94_20470) | 4635795..4636865 | - | 1071 | WP_226510690.1 | hypothetical protein | - |
| LHK94_RS20470 (LHK94_20475) | 4637450..4639570 | - | 2121 | WP_226510691.1 | portal protein | - |
| LHK94_RS20475 (LHK94_20480) | 4639570..4641234 | - | 1665 | WP_226511695.1 | terminase | - |
| LHK94_RS20480 (LHK94_20485) | 4641249..4642067 | - | 819 | WP_226510692.1 | terminase | - |
| LHK94_RS20485 (LHK94_20490) | 4642130..4642762 | - | 633 | WP_226510693.1 | RyR domain-containing protein | - |
| LHK94_RS20490 (LHK94_20495) | 4642906..4643172 | - | 267 | WP_226510694.1 | hypothetical protein | - |
| LHK94_RS20495 (LHK94_20500) | 4643267..4643800 | - | 534 | WP_226510695.1 | hypothetical protein | - |
| LHK94_RS20500 (LHK94_20505) | 4643886..4644386 | - | 501 | WP_226510696.1 | glycoside hydrolase family 104 protein | - |
| LHK94_RS20505 (LHK94_20510) | 4644370..4644693 | - | 324 | WP_210193681.1 | phage holin, lambda family | - |
| LHK94_RS20510 (LHK94_20515) | 4644846..4645547 | - | 702 | WP_226510697.1 | Abi-alpha family protein | - |
| LHK94_RS20515 (LHK94_20520) | 4645562..4646371 | - | 810 | WP_226510698.1 | hypothetical protein | - |
| LHK94_RS20520 (LHK94_20525) | 4646443..4646643 | - | 201 | WP_226510699.1 | hypothetical protein | - |
| LHK94_RS20525 (LHK94_20530) | 4646662..4647873 | - | 1212 | WP_226510700.1 | XRE family transcriptional regulator | - |
| LHK94_RS20530 (LHK94_20535) | 4647885..4648568 | - | 684 | WP_226510701.1 | hypothetical protein | - |
| LHK94_RS20535 (LHK94_20540) | 4648662..4649135 | - | 474 | WP_226510702.1 | VRR-NUC domain-containing protein | - |
| LHK94_RS20540 (LHK94_20545) | 4649465..4650382 | - | 918 | WP_226510703.1 | hypothetical protein | - |
| LHK94_RS20545 (LHK94_20550) | 4650455..4650751 | - | 297 | WP_226510704.1 | DUF1364 domain-containing protein | - |
| LHK94_RS20550 (LHK94_20555) | 4650880..4651527 | - | 648 | WP_226510705.1 | DUF1367 family protein | - |
| LHK94_RS20555 (LHK94_20560) | 4651524..4652189 | - | 666 | WP_226510706.1 | phage N-6-adenine-methyltransferase | - |
| LHK94_RS20560 (LHK94_20565) | 4652186..4652965 | - | 780 | WP_226510707.1 | KilA-N domain-containing protein | - |
| LHK94_RS20565 (LHK94_20570) | 4652962..4653192 | - | 231 | WP_226511696.1 | DNA translocase FtsK | - |
| LHK94_RS20570 (LHK94_20575) | 4653199..4654092 | - | 894 | Protein_4005 | recombination-associated protein RdgC | - |
| LHK94_RS20575 (LHK94_20580) | 4654163..4654699 | - | 537 | WP_168640823.1 | hypothetical protein | - |
| LHK94_RS20580 (LHK94_20585) | 4654703..4655455 | - | 753 | WP_226510708.1 | replication protein P | - |
| LHK94_RS20585 (LHK94_20590) | 4655452..4656399 | - | 948 | WP_226510709.1 | helix-turn-helix domain-containing protein | - |
| LHK94_RS20590 (LHK94_20595) | 4656396..4656572 | - | 177 | WP_110372171.1 | DUF4222 domain-containing protein | - |
| LHK94_RS20595 (LHK94_20600) | 4656550..4656765 | - | 216 | WP_110372172.1 | hypothetical protein | - |
| LHK94_RS20600 (LHK94_20605) | 4656762..4657118 | - | 357 | WP_226510710.1 | hypothetical protein | - |
| LHK94_RS20605 (LHK94_20610) | 4657135..4657377 | - | 243 | WP_226510711.1 | YdaS family helix-turn-helix protein | - |
| LHK94_RS20610 (LHK94_20615) | 4657479..4658192 | + | 714 | WP_226510712.1 | helix-turn-helix transcriptional regulator | - |
| LHK94_RS20615 (LHK94_20620) | 4658359..4659111 | - | 753 | WP_226510713.1 | hypothetical protein | - |
| LHK94_RS20620 (LHK94_20625) | 4659753..4660025 | + | 273 | WP_226510714.1 | hypothetical protein | - |
| LHK94_RS20625 (LHK94_20630) | 4660312..4660560 | + | 249 | WP_226510715.1 | hypothetical protein | - |
| LHK94_RS20630 (LHK94_20635) | 4660553..4660837 | + | 285 | WP_210192534.1 | hypothetical protein | - |
| LHK94_RS20635 (LHK94_20640) | 4660839..4661081 | + | 243 | WP_226510716.1 | KTSC domain-containing protein | - |
| LHK94_RS20640 (LHK94_20645) | 4661149..4661469 | + | 321 | WP_226510717.1 | hypothetical protein | - |
| LHK94_RS20645 (LHK94_20650) | 4661606..4661752 | + | 147 | WP_193601452.1 | hypothetical protein | - |
| LHK94_RS20650 (LHK94_20655) | 4661766..4662416 | + | 651 | Protein_4021 | phage recombination protein Bet | - |
| LHK94_RS20655 (LHK94_20660) | 4662601..4664160 | + | 1560 | WP_226510718.1 | YqaJ viral recombinase family protein | - |
| LHK94_RS20660 (LHK94_20665) | 4664201..4665340 | + | 1140 | WP_226510719.1 | hypothetical protein | - |
| LHK94_RS20665 (LHK94_20670) | 4665342..4665755 | + | 414 | WP_226510720.1 | hypothetical protein | - |
| LHK94_RS20670 (LHK94_20675) | 4665756..4666517 | + | 762 | WP_226510721.1 | hypothetical protein | - |
| LHK94_RS20675 (LHK94_20680) | 4666586..4667581 | + | 996 | WP_226510722.1 | hypothetical protein | - |
| LHK94_RS20680 (LHK94_20685) | 4667651..4668466 | + | 816 | WP_226510723.1 | hypothetical protein | - |
| LHK94_RS20685 (LHK94_20690) | 4668713..4669063 | + | 351 | WP_226510724.1 | hypothetical protein | - |
| LHK94_RS20690 (LHK94_20695) | 4669115..4669543 | + | 429 | WP_226510725.1 | class I SAM-dependent methyltransferase | - |
| LHK94_RS20695 (LHK94_20700) | 4669900..4670166 | + | 267 | WP_226510726.1 | excisionase | - |
| LHK94_RS20700 (LHK94_20705) | 4670141..4671244 | + | 1104 | WP_226510727.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LHK94_RS20705 (LHK94_20710) | 4671709..4672107 | - | 399 | WP_012884840.1 | hypothetical protein | - |
| LHK94_RS20710 (LHK94_20715) | 4672516..4673268 | - | 753 | WP_012884842.1 | IclR family transcriptional regulator | - |
| LHK94_RS20715 (LHK94_20720) | 4673671..4674063 | + | 393 | WP_012884843.1 | RidA family protein | - |
| LHK94_RS20720 (LHK94_20725) | 4674202..4675038 | + | 837 | WP_012884844.1 | transporter substrate-binding domain-containing protein | - |
| LHK94_RS20725 (LHK94_20730) | 4675088..4675828 | + | 741 | WP_023639775.1 | amino acid ABC transporter permease | - |
| LHK94_RS20730 (LHK94_20735) | 4675825..4676472 | + | 648 | WP_226510728.1 | amino acid ABC transporter permease | - |
| LHK94_RS20735 (LHK94_20740) | 4676469..4677206 | + | 738 | WP_012884847.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| LHK94_RS20740 (LHK94_20745) | 4677218..4678489 | + | 1272 | WP_226510729.1 | alanine racemase | - |
| LHK94_RS20745 (LHK94_20750) | 4678699..4679208 | - | 510 | WP_012884849.1 | non-heme ferritin | - |
| LHK94_RS20750 (LHK94_20755) | 4679515..4680393 | - | 879 | WP_226510730.1 | copper homeostasis membrane protein CopD | - |
| LHK94_RS20755 (LHK94_20760) | 4680412..4680792 | - | 381 | WP_210182762.1 | copper homeostasis periplasmic binding protein CopC | - |
| LHK94_RS20760 (LHK94_20765) | 4680954..4681184 | + | 231 | WP_210182763.1 | DNA polymerase III subunit theta | - |
| LHK94_RS20765 (LHK94_20770) | 4681747..4683798 | - | 2052 | WP_226510731.1 | prolyl oligopeptidase family serine peptidase | - |
| LHK94_RS20770 (LHK94_20775) | 4684077..4685255 | + | 1179 | WP_226510732.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LHK94_RS20775 (LHK94_20780) | 4685350..4685991 | - | 642 | WP_012884856.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LHK94_RS20780 (LHK94_20785) | 4686146..4687621 | - | 1476 | WP_012884857.1 | glucose-6-phosphate dehydrogenase | - |
| LHK94_RS20785 (LHK94_20790) | 4687987..4688856 | + | 870 | WP_019845019.1 | MurR/RpiR family transcriptional regulator | - |
| LHK94_RS20790 (LHK94_20795) | 4689041..4690483 | + | 1443 | WP_012884859.1 | pyruvate kinase | - |
| LHK94_RS20795 (LHK94_20800) | 4690634..4691056 | - | 423 | WP_226510733.1 | hypothetical protein | - |
| LHK94_RS20800 (LHK94_20805) | 4691262..4691666 | - | 405 | WP_226510734.1 | hypothetical protein | - |
| LHK94_RS20805 (LHK94_20810) | 4692076..4693062 | - | 987 | WP_226510735.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LHK94_RS20810 (LHK94_20815) | 4693212..4694630 | - | 1419 | WP_226510736.1 | Murein DD-endopeptidase MepM | VF |
| LHK94_RS20815 (LHK94_20820) | 4694643..4695668 | - | 1026 | WP_210182770.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LHK94_RS20820 (LHK94_20825) | 4695744..4696502 | + | 759 | WP_012884865.1 | Zinc import ATP-binding protein ZnuC | VF |
| LHK94_RS20825 (LHK94_20830) | 4696499..4697284 | + | 786 | WP_012884866.1 | zinc ABC transporter permease subunit ZnuB | - |
| LHK94_RS20830 (LHK94_20835) | 4697405..4698415 | - | 1011 | WP_226510737.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LHK94_RS20835 (LHK94_20840) | 4698423..4699040 | - | 618 | WP_012884868.1 | Holliday junction branch migration protein RuvA | - |
| LHK94_RS20840 (LHK94_20845) | 4699270..4699791 | - | 522 | WP_226510738.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LHK94_RS20845 (LHK94_20850) | 4699832..4700575 | - | 744 | WP_012884870.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LHK94_RS20850 (LHK94_20855) | 4700647..4701096 | - | 450 | WP_210182773.1 | dihydroneopterin triphosphate diphosphatase | - |
| LHK94_RS20855 (LHK94_20860) | 4701098..4702888 | - | 1791 | WP_226510739.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|