MGE detailed information
MGE type: Prophage MGE length: 75915 bp
Accession: NZ_CP084532 Location: 2639406..2715320 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: chromosome
Accession: NZ_CP084532 Location: 2639406..2715320 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP70_RS12885 () | 2635135..2635593 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| LDP70_RS12890 () | 2636003..2636569 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LDP70_RS12895 () | 2636566..2637375 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LDP70_RS12900 () | 2637441..2639186 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LDP70_RS12905 () | 2639406..2639615 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LDP70_RS12910 () | 2639628..2639771 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LDP70_RS12915 () | 2640420..2640707 | - | 288 | WP_001000660.1 | YebO family protein | - |
| LDP70_RS12920 () | 2640778..2640921 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LDP70_RS12925 () | 2641079..2641318 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| LDP70_RS12930 () | 2641530..2642321 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LDP70_RS12935 () | 2642497..2643870 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| LDP70_RS12940 () | 2643918..2644799 | - | 882 | WP_000984498.1 | protease HtpX | - |
| LDP70_RS12945 () | 2644993..2647041 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LDP70_RS12950 () | 2647061..2647747 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LDP70_RS12955 () | 2647845..2648342 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LDP70_RS12960 () | 2648471..2649754 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LDP70_RS12965 () | 2649723..2652356 | + | 2634 | WP_164092565.1 | hypothetical protein | VF |
| LDP70_RS12970 () | 2652434..2653873 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LDP70_RS12975 () | 2653991..2654227 | + | 237 | WP_024131108.1 | YebV family protein | - |
| LDP70_RS12980 () | 2654338..2654529 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LDP70_RS12985 () | 2654548..2655198 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LDP70_RS12990 () | 2655422..2655586 | - | 165 | WP_001134856.1 | membrane protein | - |
| LDP70_RS12995 () | 2655871..2656593 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| LDP70_RS13000 () | 2657277..2657672 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LDP70_RS13005 () | 2658002..2658478 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| LDP70_RS13010 () | 2658851..2659270 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LDP70_RS13015 () | 2659643..2659912 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| LDP70_RS13020 () | 2660078..2660218 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| LDP70_RS13025 () | 2660364..2661571 | - | 1208 | Protein_2549 | IS256 family transposase ISEc39 | Transposase |
| LDP70_RS13030 () | 2661641..2662107 | + | 467 | Protein_2550 | tyrosine-type recombinase/integrase | - |
| LDP70_RS13035 () | 2663357..2664271 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| LDP70_RS13040 () | 2664404..2664562 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LDP70_RS13045 () | 2664572..2665186 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LDP70_RS13050 () | 2665513..2665745 | - | 233 | Protein_2554 | helix-turn-helix domain-containing protein | - |
| LDP70_RS13055 () | 2666354..2666455 | - | 102 | Protein_2555 | arsenic transporter | - |
| LDP70_RS13060 () | 2666446..2666626 | + | 181 | Protein_2556 | IS3 family transposase | - |
| LDP70_RS13065 () | 2667016..2667216 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LDP70_RS13070 () | 2667313..2667824 | - | 512 | Protein_2558 | tail fiber assembly protein | - |
| LDP70_RS23135 () | 2667837..2668124 | - | 288 | Protein_2559 | macro domain-containing protein | - |
| LDP70_RS13075 () | 2668134..2669365 | - | 1232 | Protein_2560 | tail fiber protein | - |
| LDP70_RS13080 () | 2669364..2669931 | - | 568 | Protein_2561 | phage terminase large subunit family protein | - |
| LDP70_RS13085 () | 2669918..2670409 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LDP70_RS13090 () | 2670464..2670652 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| LDP70_RS13095 () | 2670717..2670884 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LDP70_RS13100 () | 2671141..2671674 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LDP70_RS13105 () | 2671728..2671919 | - | 192 | Protein_2566 | glycoside hydrolase family 19 protein | - |
| LDP70_RS13110 () | 2671908..2672369 | + | 462 | Protein_2567 | DNA breaking-rejoining protein | - |
| LDP70_RS13115 () | 2672633..2673555 | + | 923 | Protein_2568 | hypothetical protein ; Integrase | Integrase |
| LDP70_RS13120 () | 2674500..2675300 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| LDP70_RS13125 () | 2675329..2675570 | - | 242 | Protein_2570 | recombinase family protein | - |
| LDP70_RS13130 () | 2675780..2676502 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| LDP70_RS13135 () | 2676704..2677048 | - | 345 | Protein_2572 | tail fiber assembly protein | - |
| LDP70_RS13140 () | 2677053..2677916 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| LDP70_RS13145 () | 2677956..2680287 | - | 2332 | Protein_2574 | host specificity protein J | - |
| LDP70_RS13150 () | 2680287..2680547 | - | 261 | Protein_2575 | C40 family peptidase | - |
| LDP70_RS13155 () | 2680557..2681252 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LDP70_RS13160 () | 2681342..2681875 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| LDP70_RS13165 () | 2681992..2682171 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| LDP70_RS13170 () | 2682251..2682562 | - | 312 | Protein_2579 | DUF1441 family protein | - |
| LDP70_RS23140 () | 2682770..2683249 | - | 480 | WP_001541990.1 | lysis protein | - |
| LDP70_RS13185 () | 2683267..2683719 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LDP70_RS13190 () | 2683703..2684032 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LDP70_RS13195 () | 2684308..2684994 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LDP70_RS13200 () | 2685355..2685804 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| LDP70_RS13205 () | 2686178..2686705 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| LDP70_RS13210 () | 2686799..2687488 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LDP70_RS13215 () | 2687485..2687621 | - | 137 | Protein_2587 | YlcG family protein | - |
| LDP70_RS13220 () | 2687618..2687758 | - | 141 | Protein_2588 | recombination protein NinG | - |
| LDP70_RS13225 () | 2687842..2688441 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LDP70_RS13230 () | 2688505..2688723 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| LDP70_RS13235 () | 2689025..2689123 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| LDP70_RS13240 () | 2689442..2691421 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LDP70_RS13245 () | 2691835..2692113 | + | 279 | WP_001575998.1 | excisionase | - |
| LDP70_RS13250 () | 2692088..2693167 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693305..2693450 | + | 146 | - | - | Antitoxin Detail |
| - | 2693307..2693410 | - | 104 | - | - | Toxin Detail |
| LDP70_RS13255 () | 2693550..2693903 | - | 354 | WP_000722370.1 | YebY family protein | - |
| LDP70_RS13260 () | 2693920..2694795 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LDP70_RS13265 () | 2694796..2695170 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LDP70_RS13270 () | 2695308..2695538 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LDP70_RS13275 () | 2695646..2696302 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LDP70_RS13280 () | 2696326..2697024 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LDP70_RS13285 () | 2697061..2699112 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LDP70_RS13290 () | 2699325..2699984 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LDP70_RS13295 () | 2700078..2700431 | - | 354 | WP_001042123.1 | protein YebF | - |
| LDP70_RS13300 () | 2700499..2700789 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LDP70_RS13305 () | 2700920..2702098 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LDP70_RS13310 () | 2702198..2702839 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LDP70_RS13315 () | 2702877..2704688 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| LDP70_RS13320 () | 2704923..2706398 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| LDP70_RS13325 () | 2706740..2707609 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| LDP70_RS13330 () | 2707733..2709175 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| LDP70_RS13335 () | 2709248..2710219 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LDP70_RS13340 () | 2710336..2711655 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| LDP70_RS13345 () | 2711671..2712615 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LDP70_RS13350 () | 2712694..2713449 | + | 756 | WP_000203023.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LDP70_RS13355 () | 2713446..2714231 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| LDP70_RS13360 () | 2714310..2715320 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| LDP70_RS13365 () | 2715329..2715940 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| LDP70_RS13370 () | 2716300..2716992 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| LDP70_RS13375 () | 2717201..2717800 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| LDP70_RS13380 () | 2717802..2718323 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LDP70_RS13385 () | 2718360..2719100 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LDP70_RS13390 () | 2719130..2719582 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|