MGE detailed information
MGE type: IS/Tn MGE length: 567 bp
Accession: NZ_CP084484 Location: 5753794..5754360 Organism: Pseudomonas sp. PS1(2021) Replicon: chromosome
Accession: NZ_CP084484 Location: 5753794..5754360 Organism: Pseudomonas sp. PS1(2021) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LE197_RS27375 (LE197_27370) | 5749968..5751059 | + | 1092 | Protein_5426 | methyl-accepting chemotaxis protein | - |
| LE197_RS27380 (LE197_27375) | 5751149..5751397 | - | 249 | Protein_5427 | hypothetical protein | - |
| LE197_RS27385 (LE197_27380) | 5751618..5751899 | - | 282 | WP_180690175.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LE197_RS27390 (LE197_27385) | 5751886..5752149 | - | 264 | WP_180690176.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LE197_RS27395 (LE197_27390) | 5752421..5752957 | - | 537 | WP_003159187.1 | hypothetical protein | - |
| LE197_RS27400 (LE197_27395) | 5752969..5753364 | - | 396 | WP_003159186.1 | type II toxin-antitoxin system VapC family toxin | - |
| LE197_RS27405 (LE197_27400) | 5753361..5753612 | - | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LE197_RS27410 (LE197_27405) | 5753794..5754360 | + | 567 | WP_226033767.1 | Tn3 family transposase ISPsy42 | Transposase |
| LE197_RS27415 (LE197_27410) | 5754502..5755119 | + | 618 | WP_012477616.1 | recombinase family protein | - |
| LE197_RS27420 (LE197_27415) | 5755106..5756242 | + | 1137 | WP_012477617.1 | replication initiator protein A | - |
| LE197_RS27425 (LE197_27420) | 5756749..5757345 | - | 597 | WP_060765988.1 | MarR family transcriptional regulator | - |
| LE197_RS27430 (LE197_27425) | 5757876..5758850 | + | 975 | WP_226033768.1 | PDR/VanB family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|