MGE detailed information
MGE type: IS/Tn MGE length: 1209 bp
Accession: NZ_CP084429 Location: 2931465..2932673 Organism: Edwardsiella piscicida strain S07-346 Replicon: chromosome
Accession: NZ_CP084429 Location: 2931465..2932673 Organism: Edwardsiella piscicida strain S07-346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DCF38_RS13470 (DCF38_13470) | 2927797..2928147 | + | 351 | WP_012849565.1 | outer membrane protein assembly factor BamE | - |
| DCF38_RS13475 (DCF38_13475) | 2928188..2928472 | - | 285 | WP_012849566.1 | RnfH family protein | - |
| DCF38_RS13480 (DCF38_13480) | 2928465..2928899 | - | 435 | WP_012849567.1 | type II toxin-antitoxin system RatA family toxin | - |
| DCF38_RS13485 (DCF38_13485) | 2929053..2929535 | + | 483 | WP_012849568.1 | SsrA-binding protein SmpB | - |
| DCF38_RS13495 (DCF38_13495) | 2930139..2931380 | + | 1242 | WP_015683438.1 | integrase | - |
| DCF38_RS13500 (DCF38_13500) | 2931465..2932673 | - | 1209 | WP_012848447.1 | IS256 family transposase ISEic2 | Transposase |
| DCF38_RS13505 (DCF38_13505) | 2932747..2933106 | + | 360 | Protein_2609 | antirestriction protein | - |
| DCF38_RS13510 (DCF38_13510) | 2933119..2933661 | + | 543 | WP_041692659.1 | DNA repair protein RadC | - |
| DCF38_RS13515 (DCF38_13515) | 2933658..2933879 | + | 222 | WP_015683451.1 | DUF987 domain-containing protein | - |
| DCF38_RS13520 (DCF38_13520) | 2933905..2934270 | + | 366 | WP_015683452.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DCF38_RS13525 (DCF38_13525) | 2934308..2934637 | + | 330 | WP_015683453.1 | TA system toxin CbtA family protein | Toxin Detail |
| DCF38_RS13530 (DCF38_13530) | 2935017..2935313 | + | 297 | WP_012849576.1 | YciI family protein | - |
| DCF38_RS13535 (DCF38_13535) | 2935430..2935816 | - | 387 | WP_012849577.1 | RidA family protein | - |
| DCF38_RS13540 (DCF38_13540) | 2935853..2936179 | - | 327 | WP_012849578.1 | AzlD domain-containing protein | - |
| DCF38_RS13545 (DCF38_13545) | 2936172..2936909 | - | 738 | WP_172454870.1 | AzlC family ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|