MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59938 bp
Accession: NZ_CP084224 Location: 1..59938 Organism: Arsenophonus apicola strain ArsBeeUS Replicon: plasmid pArsBee2
Accession: NZ_CP084224 Location: 1..59938 Organism: Arsenophonus apicola strain ArsBeeUS Replicon: plasmid pArsBee2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDL57_RS16155 (LDL57_16155) | 250..873 | + | 624 | WP_006663401.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LDL57_RS16160 (LDL57_16160) | 930..3904 | + | 2975 | Protein_2 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| LDL57_RS16165 (LDL57_16165) | 4148..4411 | + | 264 | WP_225507814.1 | thermonuclease family protein | - |
| LDL57_RS16170 (LDL57_16170) | 4499..5092 | + | 594 | WP_225507816.1 | transposase zinc-binding domain-containing protein | - |
| LDL57_RS16175 (LDL57_16175) | 5732..8965 | - | 3234 | WP_225507818.1 | Extracellular serine protease | VF |
| LDL57_RS16180 (LDL57_16180) | 9041..9319 | - | 279 | WP_225507820.1 | IS630 family transposase ISOt3 | Transposase |
| LDL57_RS16185 (LDL57_16185) | 9472..9819 | - | 348 | WP_180558373.1 | IS630 family transposase ISOt3 | Transposase |
| LDL57_RS16190 (LDL57_16190) | 9743..10081 | - | 339 | WP_225507822.1 | IS630 transposase-related protein | - |
| LDL57_RS16195 (LDL57_16195) | 10269..11327 | + | 1059 | WP_225507823.1 | IS91 family transposase ISVa3 | Transposase |
| LDL57_RS16200 (LDL57_16200) | 11702..12268 | - | 567 | WP_225507825.1 | ProQ/FINO family protein | - |
| LDL57_RS16205 (LDL57_16205) | 12270..13223 | - | 954 | WP_225507827.1 | Recombination-promoting nuclease RpnA | VF |
| LDL57_RS16210 (LDL57_16210) | 13555..13875 | - | 321 | WP_225507829.1 | hypothetical protein | - |
| LDL57_RS16215 (LDL57_16215) | 13872..14144 | - | 273 | WP_225507784.1 | HU family DNA-binding protein | - |
| LDL57_RS16220 (LDL57_16220) | 14844..15776 | + | 933 | WP_225507831.1 | replication initiator protein A | - |
| LDL57_RS16225 (LDL57_16225) | 15883..16149 | - | 267 | WP_225507833.1 | ribbon-helix-helix domain-containing protein | - |
| LDL57_RS16230 (LDL57_16230) | 16186..16830 | - | 645 | WP_225507836.1 | AAA family ATPase | - |
| LDL57_RS16235 (LDL57_16235) | 17470..17874 | + | 405 | WP_225507838.1 | hypothetical protein | - |
| LDL57_RS16240 (LDL57_16240) | 18078..18233 | + | 156 | WP_225507840.1 | HNH endonuclease signature motif containing protein | - |
| LDL57_RS16245 (LDL57_16245) | 18235..18489 | + | 255 | WP_225507842.1 | bacteriocin immunity protein | - |
| LDL57_RS16250 (LDL57_16250) | 19018..19281 | + | 264 | WP_225507860.1 | immunity protein | - |
| LDL57_RS16255 (LDL57_16255) | 19303..20100 | + | 798 | WP_225507862.1 | S-type pyocin domain-containing protein | - |
| LDL57_RS16260 (LDL57_16260) | 20103..20360 | + | 258 | WP_225507844.1 | immunity protein | - |
| LDL57_RS16265 (LDL57_16265) | 20391..21116 | + | 726 | Protein_23 | S-type pyocin domain-containing protein | - |
| LDL57_RS16270 (LDL57_16270) | 21118..21375 | + | 258 | WP_225507846.1 | bacteriocin immunity protein | - |
| LDL57_RS16275 (LDL57_16275) | 21450..21965 | + | 516 | WP_225507848.1 | A24 family peptidase | - |
| LDL57_RS16280 (LDL57_16280) | 22009..22674 | + | 666 | WP_225507850.1 | hypothetical protein | - |
| LDL57_RS17865 | 22678..22806 | + | 129 | WP_255653931.1 | hypothetical protein | - |
| LDL57_RS16285 (LDL57_16285) | 22796..23185 | + | 390 | WP_225507852.1 | hypothetical protein | - |
| LDL57_RS16290 (LDL57_16290) | 23216..23371 | + | 156 | WP_225507840.1 | HNH endonuclease signature motif containing protein | - |
| LDL57_RS16295 (LDL57_16295) | 23373..23627 | + | 255 | WP_225507842.1 | bacteriocin immunity protein | - |
| LDL57_RS16300 (LDL57_16300) | 24158..24256 | + | 99 | Protein_31 | resolvase | - |
| LDL57_RS16305 (LDL57_16305) | 24926..25579 | - | 654 | WP_225507854.1 | hypothetical protein | - |
| LDL57_RS16310 (LDL57_16310) | 26336..27187 | + | 852 | WP_225507856.1 | Vmh family MBL fold metallo-hydrolase | - |
| LDL57_RS16315 (LDL57_16315) | 27415..27696 | - | 282 | Protein_34 | DUF1440 domain-containing protein | - |
| LDL57_RS16320 (LDL57_16320) | 27709..28863 | - | 1155 | Protein_35 | IS3 family transposase | - |
| LDL57_RS16325 (LDL57_16325) | 28907..30073 | - | 1167 | WP_225507858.1 | alpha-hydroxy-acid oxidizing protein | - |
| LDL57_RS16330 (LDL57_16330) | 30091..30315 | - | 225 | WP_225507758.1 | hypothetical protein | - |
| LDL57_RS16335 (LDL57_16335) | 30355..30879 | - | 525 | WP_225507760.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LDL57_RS16340 (LDL57_16340) | 30876..31154 | - | 279 | WP_225507762.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LDL57_RS16345 (LDL57_16345) | 31541..32818 | + | 1278 | WP_225507764.1 | hypothetical protein | VF |
| LDL57_RS16350 (LDL57_16350) | 32806..33331 | - | 526 | Protein_41 | lipocalin family protein | - |
| LDL57_RS16355 (LDL57_16355) | 33409..33693 | + | 285 | WP_225507766.1 | hypothetical protein | - |
| LDL57_RS16360 (LDL57_16360) | 33723..34082 | + | 360 | WP_180559738.1 | hypothetical protein | - |
| LDL57_RS17870 | 34103..34483 | + | 381 | WP_255653930.1 | DUF6012 family protein | - |
| LDL57_RS16370 (LDL57_16370) | 34603..35028 | + | 426 | WP_225507870.1 | hypothetical protein | - |
| LDL57_RS16375 (LDL57_16375) | 35040..37205 | + | 2166 | Protein_46 | DNA topoisomerase 3 | - |
| LDL57_RS16380 (LDL57_16380) | 37288..37632 | + | 345 | WP_180558369.1 | hypothetical protein | Relaxase |
| LDL57_RS16385 (LDL57_16385) | 37622..38041 | + | 420 | WP_225507768.1 | relaxase | - |
| LDL57_RS16390 (LDL57_16390) | 38038..38379 | + | 342 | WP_225507770.1 | hypothetical protein | - |
| LDL57_RS16395 (LDL57_16395) | 38615..38866 | + | 252 | Protein_50 | hypothetical protein | - |
| LDL57_RS16400 (LDL57_16400) | 39460..40365 | + | 906 | WP_225507866.1 | hypothetical protein | - |
| LDL57_RS16405 (LDL57_16405) | 40694..41065 | + | 372 | WP_180558371.1 | hypothetical protein | - |
| LDL57_RS16410 (LDL57_16410) | 41068..41844 | + | 777 | WP_225507772.1 | conjugal transfer protein TraL | - |
| LDL57_RS16415 (LDL57_16415) | 41877..42395 | + | 519 | WP_225507774.1 | hypothetical protein | - |
| LDL57_RS16420 (LDL57_16420) | 42583..42981 | + | 399 | WP_225507868.1 | thermonuclease family protein | - |
| LDL57_RS16425 (LDL57_16425) | 43004..44275 | - | 1272 | WP_225507776.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LDL57_RS16430 (LDL57_16430) | 44496..45335 | + | 840 | WP_180559731.1 | GIY-YIG nuclease family protein | - |
| LDL57_RS16435 (LDL57_16435) | 45343..45522 | - | 180 | WP_180559732.1 | Rop family plasmid primer RNA-binding protein | - |
| LDL57_RS16440 (LDL57_16440) | 45561..45791 | - | 231 | WP_180559733.1 | hypothetical protein | - |
| LDL57_RS16445 (LDL57_16445) | 45784..46350 | - | 567 | WP_225507778.1 | ProQ/FINO family protein | - |
| LDL57_RS16450 (LDL57_16450) | 46352..47317 | - | 966 | WP_225507779.1 | Recombination-promoting nuclease RpnA | VF |
| LDL57_RS16455 (LDL57_16455) | 47649..47969 | - | 321 | WP_225507782.1 | hypothetical protein | - |
| LDL57_RS16460 (LDL57_16460) | 47966..48238 | - | 273 | WP_225507784.1 | HU family DNA-binding protein | - |
| LDL57_RS16465 (LDL57_16465) | 48935..49867 | + | 933 | WP_225507786.1 | replication initiator protein A | - |
| LDL57_RS16470 (LDL57_16470) | 50024..50656 | + | 633 | WP_225507788.1 | ParA family partition ATPase | - |
| LDL57_RS16475 (LDL57_16475) | 50653..50892 | + | 240 | WP_225507789.1 | plasmid partition protein ParG | - |
| LDL57_RS16480 (LDL57_16480) | 50904..51347 | + | 444 | WP_225507791.1 | GNAT family N-acetyltransferase | - |
| LDL57_RS16485 (LDL57_16485) | 51322..51801 | + | 480 | WP_225507793.1 | molybdopterin-dependent oxidoreductase | - |
| LDL57_RS16490 (LDL57_16490) | 51954..53072 | + | 1119 | WP_225507795.1 | HAMP domain-containing sensor histidine kinase | - |
| LDL57_RS16495 (LDL57_16495) | 53055..53837 | - | 783 | WP_225507797.1 | helix-turn-helix domain-containing protein | - |
| LDL57_RS16500 (LDL57_16500) | 54007..54333 | + | 327 | WP_225507799.1 | hypothetical protein | - |
| LDL57_RS16505 (LDL57_16505) | 54569..54862 | + | 294 | WP_225507801.1 | hypothetical protein | - |
| LDL57_RS16510 (LDL57_16510) | 54887..55114 | + | 228 | WP_225507803.1 | hypothetical protein | - |
| LDL57_RS16515 (LDL57_16515) | 55118..55738 | + | 621 | WP_225507805.1 | Type IV secretion system protein virB1 | VF |
| LDL57_RS16520 (LDL57_16520) | 55739..56062 | + | 324 | WP_180558330.1 | hypothetical protein | - |
| LDL57_RS16525 (LDL57_16525) | 56062..56433 | + | 372 | WP_225507807.1 | VirB3 family type IV secretion system protein | - |
| LDL57_RS16530 (LDL57_16530) | 56387..58891 | + | 2505 | WP_225507809.1 | conjugal transfer protein | - |
| LDL57_RS16535 (LDL57_16535) | 58876..59550 | + | 675 | WP_225507810.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|