MGE detailed information
MGE type: Genomic_island MGE length: 36046 bp
Accession: NZ_CP084194 Location: 4173596..4209641 Organism: Salmonella sp. A39 Replicon: chromosome
Accession: NZ_CP084194 Location: 4173596..4209641 Organism: Salmonella sp. A39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO68_RS20390 (4169053) | 4169053..4170093 | + | 1041 | WP_000255079.1 | tellurium resistance membrane protein TerC | - |
| LDO68_RS20395 (4170142) | 4170142..4170720 | + | 579 | WP_000116678.1 | tellurium resistance membrane protein TerD | - |
| LDO68_RS20400 (4170788) | 4170788..4171363 | + | 576 | WP_000301242.1 | TerD family protein | - |
| LDO68_RS20405 (4171792) | 4171792..4173033 | + | 1242 | WP_001053338.1 | VWA domain-containing protein | - |
| LDO68_RS24525 (4173124) | 4173124..4173255 | + | 132 | WP_000374059.1 | hypothetical protein | - |
| LDO68_RS20410 (4173596) | 4173596..4173877 | - | 282 | WP_000077926.1 | hypothetical protein | - |
| LDO68_RS20415 (4173927) | 4173927..4174118 | - | 192 | WP_000398480.1 | hypothetical protein | - |
| LDO68_RS20420 (4174210) | 4174210..4174551 | - | 342 | WP_001151575.1 | hypothetical protein | - |
| LDO68_RS20425 (4174885) | 4174885..4175316 | + | 432 | WP_011152969.1 | hypothetical protein | - |
| LDO68_RS20430 (4175920) | 4175920..4176213 | + | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LDO68_RS20435 (4176218) | 4176218..4177543 | + | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| LDO68_RS20440 (4177604) | 4177604..4177810 | + | 207 | WP_000134171.1 | hypothetical protein | - |
| LDO68_RS20445 (4177912) | 4177912..4178322 | + | 411 | WP_000985911.1 | hypothetical protein | - |
| LDO68_RS20450 (4178335) | 4178335..4179024 | + | 690 | WP_225522439.1 | HNH endonuclease signature motif containing protein | - |
| LDO68_RS20455 (4179058) | 4179058..4179761 | - | 704 | Protein_3998 | IS6 family transposase IS26 | Transposase |
| LDO68_RS20460 (4179824) | 4179824..4180294 | + | 471 | Protein_3999 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LDO68_RS20465 (4180359) | 4180359..4181488 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| LDO68_RS20470 (4181595) | 4181595..4182398 | + | 804 | WP_024261901.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LDO68_RS20475 (4182398) | 4182398..4183234 | + | 837 | WP_045893453.1 | hypothetical protein | ARG |
| LDO68_RS20480 (4183276) | 4183276..4183623 | - | 348 | WP_223381118.1 | CcgAII protein | - |
| LDO68_RS20485 (4183678) | 4183678..4183857 | - | 180 | WP_000214483.1 | protein CcgAI | - |
| LDO68_RS20490 (4184083) | 4184083..4184943 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LDO68_RS20495 (4185126) | 4185126..4185683 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LDO68_RS20500 (4185999) | 4185999..4186702 | + | 704 | Protein_4007 | IS6 family transposase IS26 | Transposase |
| LDO68_RS20505 (4187037) | 4187037..4187429 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LDO68_RS20510 (4187749) | 4187749..4188135 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| LDO68_RS20515 (4188329) | 4188329..4189032 | - | 704 | Protein_4010 | IS6 family transposase IS26 | Transposase |
| LDO68_RS20520 (4189100) | 4189100..4190398 | + | 1299 | Protein_4011 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LDO68_RS20525 (4190432) | 4190432..4191148 | + | 717 | Protein_4012 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LDO68_RS20530 (4191206) | 4191206..4191448 | + | 243 | WP_000844627.1 | transposase | - |
| LDO68_RS20535 (4191480) | 4191480..4192130 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LDO68_RS20540 (4192236) | 4192236..4193435 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LDO68_RS20545 (4193467) | 4193467..4194351 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| LDO68_RS20550 (4194489) | 4194489..4194881 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LDO68_RS20555 (4194885) | 4194885..4196636 | + | 1752 | Protein_4018 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LDO68_RS20560 (4196710) | 4196710..4197096 | + | 387 | WP_181728339.1 | hypothetical protein | - |
| LDO68_RS20565 (4197263) | 4197263..4197790 | + | 528 | WP_001027750.1 | hypothetical protein | - |
| LDO68_RS20570 (4197841) | 4197841..4198248 | - | 408 | WP_000074418.1 | hypothetical protein | - |
| LDO68_RS20575 (4198278) | 4198278..4198739 | - | 462 | WP_000185304.1 | hypothetical protein | - |
| LDO68_RS20580 (4199076) | 4199076..4199273 | - | 198 | WP_000710701.1 | hypothetical protein | - |
| LDO68_RS20585 (4199968) | 4199968..4200375 | - | 408 | WP_001572392.1 | hypothetical protein | - |
| LDO68_RS20590 (4200423) | 4200423..4201319 | - | 897 | WP_000975182.1 | hypothetical protein | - |
| LDO68_RS20595 (4201322) | 4201322..4201837 | - | 516 | WP_001572389.1 | thermonuclease family protein | - |
| LDO68_RS20600 (4202052) | 4202052..4203479 | + | 1428 | WP_080247978.1 | DNA cytosine methyltransferase | - |
| LDO68_RS20605 (4203540) | 4203540..4203707 | + | 168 | WP_000220758.1 | hypothetical protein | - |
| LDO68_RS20610 (4203730) | 4203730..4205049 | + | 1320 | WP_000078514.1 | DUF1173 family protein | - |
| LDO68_RS20615 (4205329) | 4205329..4205580 | - | 252 | WP_225522440.1 | hypothetical protein | - |
| LDO68_RS20620 (4205605) | 4205605..4206308 | + | 704 | Protein_4031 | IS6 family transposase IS26 | Transposase |
| LDO68_RS20625 (4206362) | 4206362..4208992 | - | 2631 | Protein_4032 | AAA domain-containing protein | - |
| LDO68_RS20630 (4209354) | 4209354..4209641 | - | 288 | WP_001687450.1 | Arm DNA-binding domain-containing protein | - |
| LDO68_RS20640 (4210167) | 4210167..4211186 | + | 1020 | WP_000152563.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LDO68_RS20645 (4211214) | 4211214..4211744 | - | 531 | WP_000896756.1 | gluconokinase | - |
| LDO68_RS20650 (4211961) | 4211961..4212992 | + | 1032 | WP_061360760.1 | L-idonate 5-dehydrogenase | - |
| LDO68_RS20655 (4213017) | 4213017..4213781 | + | 765 | WP_080247851.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|