MGE detailed information
MGE type: IScluster/Tn MGE length: 31748 bp
Accession: NZ_CP083881 Location: 602..32349 Organism: Escherichia coli strain NDM3 Replicon: plasmid unnamed1
Accession: NZ_CP083881 Location: 602..32349 Organism: Escherichia coli strain NDM3 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE26_RS22860 (299) | 299..904 | + | 606 | Protein_0 | recombinase family protein | - |
| LCE26_RS22865 (928) | 928..1677 | - | 750 | Protein_1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LCE26_RS22870 (1681) | 1681..2073 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LCE26_RS22875 (2211) | 2211..3094 | + | 884 | Protein_3 | EamA family transporter | - |
| LCE26_RS22880 (3126) | 3126..4323 | - | 1198 | Protein_4 | tetracycline efflux MFS transporter Tet(A) | - |
| LCE26_RS22885 (4429) | 4429..5079 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LCE26_RS22890 (5111) | 5111..5353 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| LCE26_RS22895 (5394) | 5394..6907 | - | 1514 | Protein_7 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LCE26_RS22900 (6973) | 6973..7677 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCE26_RS22905 (7821) | 7821..8375 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LCE26_RS22910 (8506) | 8506..9336 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LCE26_RS22915 (9474) | 9474..9914 | + | 441 | Protein_11 | CatB-related O-acetyltransferase | - |
| LCE26_RS22920 (9968) | 9968..10672 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCE26_RS22925 (10738) | 10738..11025 | + | 288 | Protein_13 | IS1380 family transposase ISEcp1 | Transposase |
| LCE26_RS22930 (11281) | 11281..12156 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| LCE26_RS22935 (12203) | 12203..12535 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| LCE26_RS22940 (12561) | 12561..14779 | + | 2219 | Protein_16 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LCE26_RS22945 (14856) | 14856..15558 | + | 703 | Protein_17 | IS6 family transposase IS26 | Transposase |
| LCE26_RS22950 (15610) | 15610..16074 | + | 465 | Protein_18 | IS6 family transposase IS6100 | Transposase |
| LCE26_RS22955 (16564) | 16564..17148 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LCE26_RS22960 (17148) | 17148..18386 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LCE26_RS22965 (18383) | 18383..19297 | - | 915 | WP_023063803.1 | hypothetical protein | ARG |
| LCE26_RS22970 (19419) | 19419..20123 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCE26_RS22975 (20288) | 20288..20580 | + | 293 | Protein_23 | IS30 family transposase | - |
| LCE26_RS22980 (20681) | 20681..21493 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| LCE26_RS22985 (21497) | 21497..21862 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| LCE26_RS22990 (21867) | 21867..22505 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| LCE26_RS22995 (22516) | 22516..23073 | - | 558 | Protein_27 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| LCE26_RS23000 (23173) | 23173..23547 | - | 375 | Protein_28 | protein-disulfide reductase DsbD family protein | - |
| LCE26_RS23005 (23860) | 23860..25401 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LCE26_RS23010 (25806) | 25806..26645 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LCE26_RS23015 (26639) | 26639..26986 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LCE26_RS23020 (27103) | 27103..27941 | - | 839 | Protein_32 | Streptomycin 3''-adenylyltransferase | ARG |
| LCE26_RS23025 (27947) | 27947..28237 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| LCE26_RS23030 (28349) | 28349..28846 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| LCE26_RS23035 (28991) | 28991..29857 | + | 867 | Protein_35 | IS91 family transposase ISAzo26 | Transposase |
| LCE26_RS23040 (29912) | 29912..30616 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCE26_RS23045 (31171) | 31171..31455 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LCE26_RS23050 (31455) | 31455..31730 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LCE26_RS23060 (32613) | 32613..32816 | + | 204 | Protein_40 | hypothetical protein | - |
| LCE26_RS23065 (32941) | 32941..33069 | - | 129 | Protein_41 | IS481 family transposase | - |
| LCE26_RS23070 (33102) | 33102..34271 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| LCE26_RS23075 (34803) | 34803..35071 | + | 269 | Protein_43 | type II toxin-antitoxin system ParD family antitoxin | - |
| LCE26_RS23080 (35058) | 35058..35347 | + | 290 | Protein_44 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCE26_RS23085 (35414) | 35414..35596 | + | 183 | WP_042344623.1 | hypothetical protein | - |
| LCE26_RS23090 (35717) | 35717..36457 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|