MGE detailed information
MGE type: Conjugative plasmid MGE length: 155994 bp
Accession: NZ_CP083531 Location: 1..155994 Organism: Escherichia coli strain elppa2 Replicon: plasmid unnamed1
Accession: NZ_CP083531 Location: 1..155994 Organism: Escherichia coli strain elppa2 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U05_RS23480 (1038) | 1038..2060 | + | 1023 | WP_228613829.1 | DNA helicase UvrD | - |
| K9U05_RS23490 (3391) | 3391..5592 | - | 2202 | WP_228613831.1 | ferric aerobactin receptor IutA | - |
| K9U05_RS23495 (5618) | 5618..6951 | - | 1334 | Protein_4 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| K9U05_RS23500 (6948) | 6948..8690 | - | 1743 | WP_228613833.1 | IucA/IucC family siderophore biosynthesis protein | - |
| K9U05_RS23505 (8690) | 8690..9637 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| K9U05_RS23510 (9638) | 9638..11362 | - | 1725 | WP_000602863.1 | NIS family aerobactin synthetase IucA | - |
| K9U05_RS23515 (11498) | 11498..12691 | + | 1194 | WP_228613835.1 | MFS transporter | - |
| K9U05_RS23520 (13071) | 13071..13451 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| K9U05_RS23525 (13792) | 13792..14205 | - | 414 | Protein_10 | phosphopyruvate hydratase | - |
| K9U05_RS23530 (14694) | 14694..15551 | - | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| K9U05_RS23535 (15548) | 15548..16405 | - | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| K9U05_RS23540 (16402) | 16402..17229 | - | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| K9U05_RS23545 (17229) | 17229..18143 | - | 915 | Protein_14 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| K9U05_RS23550 (18499) | 18499..19196 | + | 698 | Protein_15 | IS1-like element IS1A family transposase | - |
| K9U05_RS23555 (19376) | 19376..19889 | - | 514 | Protein_16 | DUF4113 domain-containing protein | - |
| K9U05_RS23560 (19950) | 19950..20054 | - | 105 | Protein_17 | AAA family ATPase | - |
| K9U05_RS23565 (20056) | 20056..20379 | - | 324 | Protein_18 | helix-turn-helix domain-containing protein | - |
| K9U05_RS23570 (21125) | 21125..22102 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| K9U05_RS23575 (22387) | 22387..23127 | - | 741 | WP_228613838.1 | tyrosine-type recombinase/integrase | - |
| K9U05_RS23580 (23248) | 23248..23436 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| K9U05_RS23585 (23810) | 23810..24712 | - | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
| K9U05_RS23590 (24781) | 24781..25890 | - | 1110 | WP_228613840.1 | SDR family oxidoreductase | - |
| K9U05_RS23595 (26323) | 26323..27276 | - | 954 | WP_000280980.1 | omptin family outer membrane protease | - |
| K9U05_RS23600 (28573) | 28573..28752 | - | 180 | Protein_25 | integrase core domain-containing protein | - |
| K9U05_RS23605 (28891) | 28891..30090 | + | 1200 | Protein_26 | IS3 family transposase | - |
| K9U05_RS23610 (30238) | 30238..30563 | - | 326 | Protein_27 | integrase core domain-containing protein | - |
| K9U05_RS23615 (30609) | 30609..30949 | + | 341 | Protein_28 | IS3 family transposase | - |
| K9U05_RS23620 (31544) | 31544..32731 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| K9U05_RS23625 (32728) | 32728..34668 | + | 1941 | WP_228613842.1 | MacB family efflux pump subunit | - |
| K9U05_RS23630 (34672) | 34672..36042 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| K9U05_RS23635 (36516) | 36516..36710 | + | 195 | Protein_32 | IS200/IS605-like element IS200C family transposase | - |
| K9U05_RS23640 (36839) | 36839..37780 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| K9U05_RS23645 (38015) | 38015..39404 | - | 1390 | Protein_34 | ISNCY family transposase | - |
| K9U05_RS23650 (39714) | 39714..39863 | - | 150 | Protein_35 | IS3 family transposase | - |
| K9U05_RS23655 (40041) | 40041..41234 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| K9U05_RS23660 (42476) | 42476..43213 | - | 738 | Protein_37 | IS3 family transposase | - |
| K9U05_RS23665 (43266) | 43266..44428 | + | 1163 | WP_088846059.1 | IS3-like element IS3 family transposase | - |
| K9U05_RS23670 (44445) | 44445..44965 | - | 521 | Protein_39 | transposase | - |
| K9U05_RS23675 (45590) | 45590..45883 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| K9U05_RS23685 (45941) | 45941..46140 | - | 200 | Protein_41 | lysis protein | - |
| K9U05_RS23690 (46694) | 46694..47718 | + | 1025 | Protein_42 | integrase core domain-containing protein | - |
| K9U05_RS23695 (49029) | 49029..50144 | + | 1116 | WP_228613844.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
| K9U05_RS23700 (50284) | 50284..53943 | + | 3660 | WP_228613846.1 | salmochelin/enterobactin export ABC transporter IroC | - |
| K9U05_RS23705 (54047) | 54047..55276 | + | 1230 | WP_000933678.1 | catecholate siderophore esterase IroD | - |
| K9U05_RS23710 (55361) | 55361..56317 | + | 957 | WP_228613848.1 | catecholate siderophore esterase IroE | - |
| K9U05_RS23715 (56362) | 56362..58539 | - | 2178 | WP_228613850.1 | siderophore salmochelin receptor IroN | - |
| K9U05_RS23720 (59405) | 59405..60439 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| K9U05_RS23725 (60620) | 60620..60921 | + | 302 | Protein_49 | hypothetical protein | - |
| K9U05_RS23730 (60999) | 60999..61307 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| K9U05_RS23735 (61460) | 61460..61585 | - | 126 | Protein_51 | type II toxin-antitoxin system toxin YacB | - |
| K9U05_RS23740 (61585) | 61585..61853 | - | 269 | Protein_52 | type II toxin-antitoxin system antitoxin YacA | - |
| K9U05_RS23745 (62464) | 62464..63738 | + | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| K9U05_RS23750 (63731) | 63731..65827 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| K9U05_RS23755 (65997) | 65997..66308 | - | 312 | WP_001259758.1 | colicin V | - |
| K9U05_RS23760 (66286) | 66286..66522 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| K9U05_RS23765 (66641) | 66641..67084 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| K9U05_RS23770 (67056) | 67056..67460 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| K9U05_RS23775 (67462) | 67462..67731 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| K9U05_RS23780 (67728) | 67728..68708 | + | 981 | WP_228613854.1 | NAD(P)-binding domain-containing protein | - |
| K9U05_RS23785 (68784) | 68784..69164 | + | 381 | WP_001171523.1 | transposase | - |
| K9U05_RS23790 (69161) | 69161..69508 | + | 348 | WP_228613856.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| K9U05_RS23795 (69558) | 69558..71095 | + | 1538 | Protein_63 | IS66-like element ISEc8 family transposase | - |
| K9U05_RS23800 (71135) | 71135..71401 | + | 267 | Protein_64 | resolvase | - |
| K9U05_RS23805 (71448) | 71448..71840 | - | 393 | Protein_65 | peptide deformylase | - |
| K9U05_RS23810 (71949) | 71949..76082 | - | 4134 | WP_228613858.1 | hemoglobin-binding protease autotransporter Hbp | - |
| K9U05_RS23815 (76253) | 76253..76444 | + | 192 | Protein_67 | IS91 family transposase | - |
| K9U05_RS23825 (76723) | 76723..76980 | + | 258 | Protein_68 | IS3 family transposase | - |
| K9U05_RS23830 (77048) | 77048..78199 | + | 1152 | WP_001442799.1 | IS30-like element IS30 family transposase | - |
| K9U05_RS23835 (78321) | 78321..78686 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| K9U05_RS23840 (78686) | 78686..79801 | + | 1116 | Protein_71 | IS91 family transposase | - |
| K9U05_RS23845 (79982) | 79982..80326 | - | 345 | WP_001553768.1 | hypothetical protein | - |
| K9U05_RS23850 (81184) | 81184..82698 | - | 1515 | Protein_73 | Tn3-like element TnAs1 family transposase | - |
| K9U05_RS23855 (82764) | 82764..83468 | + | 705 | WP_228595834.1 | IS6-like element IS26 family transposase | - |
| K9U05_RS23860 (83916) | 83916..84929 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| K9U05_RS23865 (85085) | 85085..85558 | + | 474 | WP_004201280.1 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| K9U05_RS23870 (85628) | 85628..86332 | + | 705 | WP_228595834.1 | IS6-like element IS26 family transposase | - |
| K9U05_RS23875 (86400) | 86400..89348 | + | 2949 | Protein_78 | Tn3-like element Tn3 family transposase | - |
| K9U05_RS23880 (89281) | 89281..89746 | - | 466 | Protein_79 | plasmid replication initiator RepA | - |
| K9U05_RS23885 (89739) | 89739..90221 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| K9U05_RS23890 (90214) | 90214..90261 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| K9U05_RS23895 (90252) | 90252..90503 | + | 252 | WP_228596070.1 | replication protein RepA | - |
| K9U05_RS23900 (90520) | 90520..90777 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| K9U05_RS23905 (91061) | 91061..91210 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (91254) | 91254..91315 | + | 62 | NuclAT_1 | - | - |
| - (91254) | 91254..91315 | + | 62 | NuclAT_1 | - | - |
| - (91254) | 91254..91315 | + | 62 | NuclAT_1 | - | - |
| - (91254) | 91254..91315 | + | 62 | NuclAT_1 | - | - |
| K9U05_RS23910 (91891) | 91891..92103 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| K9U05_RS23915 (92239) | 92239..92799 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| K9U05_RS23920 (92902) | 92902..93762 | - | 861 | WP_000704513.1 | alpha/beta hydrolase | - |
| K9U05_RS23925 (93821) | 93821..94567 | - | 747 | WP_228613795.1 | conjugal transfer pilus acetylase TraX | - |
| K9U05_RS23930 (94587) | 94587..99857 | - | 5271 | WP_228613797.1 | conjugative transfer relaxase/helicase TraI | - |
| K9U05_RS23935 (99939) | 99939..100166 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K9U05_RS23940 (100166) | 100166..100564 | + | 399 | WP_228613800.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| K9U05_RS23945 (100573) | 100573..102726 | - | 2154 | WP_228613801.1 | type IV conjugative transfer system coupling protein TraD | - |
| K9U05_RS23950 (102979) | 102979..103710 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| K9U05_RS23955 (103742) | 103742..104239 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| K9U05_RS23960 (104255) | 104255..107077 | - | 2823 | WP_228613803.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K9U05_RS23965 (107074) | 107074..108447 | - | 1374 | WP_228613860.1 | conjugal transfer pilus assembly protein TraH | - |
| K9U05_RS23970 (108447) | 108447..108827 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| K9U05_RS23975 (108814) | 108814..109155 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| K9U05_RS23980 (109085) | 109085..109630 | - | 546 | WP_228613805.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K9U05_RS23985 (109617) | 109617..109901 | - | 285 | WP_228613807.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K9U05_RS23990 (109982) | 109982..110296 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| K9U05_RS23995 (110298) | 110298..110645 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| K9U05_RS24000 (110661) | 110661..111404 | - | 744 | WP_001030377.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K9U05_RS24005 (111397) | 111397..111654 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| K9U05_RS24010 (111681) | 111681..113489 | - | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K9U05_RS24015 (113486) | 113486..114124 | - | 639 | WP_228613862.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K9U05_RS24020 (114133) | 114133..115125 | - | 993 | WP_228613809.1 | conjugal transfer pilus assembly protein TraU | - |
| K9U05_RS24025 (115122) | 115122..115754 | - | 633 | WP_228613810.1 | type-F conjugative transfer system protein TraW | - |
| K9U05_RS24030 (115751) | 115751..116137 | - | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
| K9U05_RS24035 (116134) | 116134..118761 | - | 2628 | WP_228613811.1 | type IV secretion system protein TraC | - |
| K9U05_RS24040 (118921) | 118921..119142 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| K9U05_RS24045 (119277) | 119277..119792 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K9U05_RS24050 (119789) | 119789..120040 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| K9U05_RS24055 (120052) | 120052..120249 | - | 198 | WP_024179215.1 | conjugal transfer protein TrbD | - |
| K9U05_RS24060 (120236) | 120236..120826 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K9U05_RS24065 (120816) | 120816..122243 | - | 1428 | WP_000146684.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K9U05_RS24070 (122243) | 122243..122971 | - | 729 | WP_228613813.1 | type-F conjugative transfer system secretin TraK | - |
| K9U05_RS24075 (122958) | 122958..123524 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| K9U05_RS24080 (123546) | 123546..123857 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K9U05_RS24085 (123872) | 123872..124237 | - | 366 | WP_228613815.1 | type IV conjugative transfer system pilin TraA | - |
| K9U05_RS24090 (124280) | 124280..124495 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| K9U05_RS24095 (124631) | 124631..125278 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| K9U05_RS24100 (125470) | 125470..125853 | - | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K9U05_RS24105 (126205) | 126205..126795 | + | 591 | WP_166494936.1 | transglycosylase SLT domain-containing protein | - |
| K9U05_RS24110 (127092) | 127092..127913 | - | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| K9U05_RS24115 (128032) | 128032..128319 | - | 288 | WP_000107546.1 | hypothetical protein | - |
| K9U05_RS24120 (128344) | 128344..128550 | - | 207 | WP_228613817.1 | single-stranded DNA-binding protein | - |
| K9U05_RS24125 (128620) | 128620..128916 | + | 297 | Protein_128 | hypothetical protein | - |
| K9U05_RS24130 (129217) | 129217..129342 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K9U05_RS24135 (129284) | 129284..129433 | - | 150 | Protein_130 | DUF5431 family protein | - |
| - (129440) | 129440..129638 | - | 199 | NuclAT_0 | - | - |
| - (129440) | 129440..129638 | - | 199 | NuclAT_0 | - | - |
| - (129440) | 129440..129638 | - | 199 | NuclAT_0 | - | - |
| - (129440) | 129440..129638 | - | 199 | NuclAT_0 | - | - |
| K9U05_RS24140 (129607) | 129607..130369 | - | 763 | Protein_131 | plasmid SOS inhibition protein A | - |
| K9U05_RS24145 (130366) | 130366..130800 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| K9U05_RS24150 (130855) | 130855..132813 | - | 1959 | WP_029487628.1 | ParB/RepB/Spo0J family partition protein | - |
| K9U05_RS24155 (132879) | 132879..133112 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| K9U05_RS24160 (133169) | 133169..133708 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| K9U05_RS24165 (134026) | 134026..134535 | + | 510 | WP_071600123.1 | hypothetical protein | - |
| K9U05_RS24170 (134505) | 134505..134696 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| K9U05_RS24175 (134693) | 134693..135115 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| K9U05_RS24180 (135162) | 135162..135587 | - | 426 | WP_001198918.1 | antirestriction protein | - |
| K9U05_RS24185 (136000) | 136000..136776 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| K9U05_RS24190 (136822) | 136822..137376 | - | 555 | WP_077248347.1 | DUF1380 family protein | - |
| K9U05_RS24195 (137270) | 137270..137491 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| K9U05_RS24200 (137492) | 137492..138175 | - | 684 | WP_228613819.1 | DNA methylase | - |
| K9U05_RS24205 (138252) | 138252..138557 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| K9U05_RS24210 (138561) | 138561..139462 | - | 902 | Protein_145 | DUF1281 domain-containing protein | - |
| K9U05_RS24215 (140372) | 140372..141343 | - | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| K9U05_RS24220 (141343) | 141343..142509 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| K9U05_RS24225 (143097) | 143097..143852 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| K9U05_RS24230 (144604) | 144604..145410 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| K9U05_RS24235 (145411) | 145411..145716 | - | 306 | WP_228613821.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K9U05_RS24240 (145718) | 145718..145936 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K9U05_RS24245 (146504) | 146504..147016 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| K9U05_RS24250 (147050) | 147050..148183 | - | 1134 | WP_228613823.1 | DUF3800 domain-containing protein | - |
| K9U05_RS24255 (148350) | 148350..149123 | - | 774 | WP_228613825.1 | hypothetical protein | - |
| K9U05_RS24260 (149136) | 149136..149636 | - | 501 | WP_000528932.1 | HEPN family nuclease | - |
| K9U05_RS24265 (149901) | 149901..150131 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K9U05_RS24270 (150128) | 150128..150544 | + | 417 | WP_021512278.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U05_RS24275 (150589) | 150589..154383 | - | 3795 | WP_001144731.1 | hypothetical protein | - |
| K9U05_RS24280 (154764) | 154764..154994 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| K9U05_RS24285 (154991) | 154991..155407 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|