MGE detailed information

MGE type: Conjugative plasmid        MGE length: 137552 bp
Accession: NZ_CP083494        Location: 1..137552         Organism: Escherichia coli strain elppa8       Replicon: plasmid unnamed3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K9U11_RS24155 (K9U11_24175) 42..746 - 705 WP_196315549.1 IS6 family transposase IS26 Transposase
K9U11_RS24160 (K9U11_24180) 979..1839 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
K9U11_RS24165 (K9U11_24185) 1852..2145 + 294 Protein_2 tunicamycin resistance protein -
K9U11_RS24170 (K9U11_24190) 2208..2912 + 705 WP_228596115.1 IS6 family transposase IS26 Transposase
K9U11_RS24175 (K9U11_24195) 2918..3058 + 141 WP_001044210.1 hypothetical protein -
K9U11_RS24180 (K9U11_24200) 3544..4281 + 738 WP_228596117.1 Tn3 family transposase TnpR_TnEc1 Transposase
K9U11_RS24185 (K9U11_24205) 4278..4502 + 225 WP_000743213.1 hypothetical protein -
K9U11_RS24190 (K9U11_24210) 4713..6206 + 1494 WP_203053926.1 IS91 family transposase ISVsa3 Transposase
K9U11_RS24195 (K9U11_24215) 6237..7121 + 885 WP_021598067.1 DUF3363 domain-containing protein -
K9U11_RS24200 (K9U11_24220) 7338..8552 + 1215 WP_023300759.1 Bicyclomycin resistance protein ARG
K9U11_RS24205 (K9U11_24225) 8580..8885 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
K9U11_RS24210 (K9U11_24230) 8997..9185 + 189 Protein_11 IS91 family transposase -
K9U11_RS24215 (K9U11_24235) 9152..10351 - 1200 WP_228596119.1 Tetracycline resistance protein, class C ARG
K9U11_RS24220 (K9U11_24240) 10457..11107 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
K9U11_RS24225 (K9U11_24245) 11139..11381 - 243 WP_000844627.1 transposase -
K9U11_RS24230 (K9U11_24250) 11439..11693 - 255 Protein_15 Tn3 family transposase -
K9U11_RS24235 (K9U11_24255) 11758..12462 + 705 WP_228596122.1 IS6 family transposase IS26 Transposase
K9U11_RS24240 (K9U11_24260) 12652..13467 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
K9U11_RS24245 (K9U11_24265) 13618..14322 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
K9U11_RS24250 (K9U11_24270) 14383..15219 - 837 WP_228596124.1 hypothetical protein ARG
K9U11_RS24255 (K9U11_24275) 15219..16022 - 804 WP_228596126.1 Aminoglycoside 3'-phosphotransferase ARG
K9U11_RS24260 (K9U11_24280) 16083..16898 - 816 WP_228596128.1 Dihydropteroate synthase ARG
K9U11_RS24265 (K9U11_24285) 17205..17516 + 312 WP_000338945.1 hypothetical protein -
K9U11_RS24270 (K9U11_24290) 17690..18475 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
K9U11_RS24275 (K9U11_24295) 18479..19660 + 1182 WP_001207227.1 KorB domain-containing protein -
K9U11_RS24280 (K9U11_24300) 19709..19981 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
K9U11_RS24285 (K9U11_24305) 20034..20669 - 636 WP_000074431.1 N-6 DNA methylase -
K9U11_RS24290 (K9U11_24310) 20761..20904 - 144 WP_000939033.1 hypothetical protein -
K9U11_RS24295 (K9U11_24315) 21223..21600 + 378 WP_001125905.1 hypothetical protein -
K9U11_RS24300 (K9U11_24320) 21593..21874 + 282 WP_000044824.1 hypothetical protein -
K9U11_RS24305 (K9U11_24325) 21849..22523 + 675 WP_228596130.1 thymidylate kinase -
K9U11_RS24310 (K9U11_24330) 22516..23022 + 507 WP_000566600.1 hypothetical protein -
K9U11_RS24315 (K9U11_24335) 23028..23339 + 312 WP_002210541.1 hypothetical protein -
K9U11_RS24320 (K9U11_24340) 23348..23848 + 501 WP_000647189.1 hypothetical protein -
K9U11_RS24325 (K9U11_24345) 23852..24871 + 1020 WP_228596132.1 DNA cytosine methyltransferase -
K9U11_RS24330 (K9U11_24350) 25094..25279 + 186 WP_228596134.1 hypothetical protein -
K9U11_RS24335 (K9U11_24355) 25279..25935 + 657 WP_228596136.1 hypothetical protein -
K9U11_RS24340 (K9U11_24360) 26141..26359 + 219 WP_000362482.1 hypothetical protein -
K9U11_RS24345 (K9U11_24365) 26453..27070 + 618 WP_000464631.1 hypothetical protein -
K9U11_RS24350 (K9U11_24370) 27303..27581 + 279 WP_014386427.1 hypothetical protein -
K9U11_RS24355 (K9U11_24375) 27673..28161 - 489 WP_000468105.1 hypothetical protein -
K9U11_RS24360 (K9U11_24380) 28176..30368 - 2193 WP_000366822.1 DNA topoisomerase 3 -
K9U11_RS24365 (K9U11_24385) 30368..30601 - 234 WP_001191892.1 hypothetical protein -
K9U11_RS24370 (K9U11_24390) 30583..31200 - 618 WP_228596138.1 hypothetical protein -
K9U11_RS24375 (K9U11_24395) 31368..34346 + 2979 WP_001337757.1 hypothetical protein Relaxase
K9U11_RS24380 (K9U11_24400) 34343..36208 + 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
K9U11_RS24385 (K9U11_24405) 36258..36803 + 546 WP_228596140.1 hypothetical protein -
K9U11_RS24390 (K9U11_24410) 36760..37389 + 630 WP_000743450.1 DUF4400 domain-containing protein -
K9U11_RS24395 (K9U11_24415) 37399..37845 + 447 WP_000122506.1 hypothetical protein -
K9U11_RS24400 (K9U11_24420) 37855..38232 + 378 WP_000869261.1 hypothetical protein -
K9U11_RS24405 (K9U11_24425) 38232..38894 + 663 WP_001231463.1 hypothetical protein -
K9U11_RS24410 (K9U11_24430) 39075..39218 + 144 WP_001275801.1 hypothetical protein -
K9U11_RS24415 (K9U11_24435) 39230..39595 + 366 WP_228596142.1 hypothetical protein -
K9U11_RS24420 (K9U11_24440) 39740..40021 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
K9U11_RS24425 (K9U11_24445) 40018..40644 + 627 WP_001049716.1 TraE/TraK family type IV conjugative transfer system protein -
K9U11_RS24430 (K9U11_24450) 40628..41431 + 804 WP_228596145.1 type-F conjugative transfer system secretin TraK -
K9U11_RS24435 (K9U11_24455) 41545..42858 + 1314 WP_024131605.1 TraB/VirB10 family protein -
K9U11_RS24440 (K9U11_24460) 42855..43433 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
K9U11_RS24445 (K9U11_24465) 43437..43829 + 393 WP_000479535.1 TraA family conjugative transfer protein -
K9U11_RS24450 (K9U11_24470) 44030..49561 + 5532 WP_228596147.1 Ig-like domain-containing protein -
K9U11_RS24455 (K9U11_24475) 49710..50417 + 708 WP_001259347.1 DsbC family protein -
K9U11_RS24460 (K9U11_24480) 50414..52861 + 2448 WP_228596149.1 type IV secretion system protein TraC -
K9U11_RS24465 (K9U11_24485) 52876..53193 + 318 WP_000351984.1 hypothetical protein -
K9U11_RS24470 (K9U11_24490) 53190..53720 + 531 WP_001010738.1 S26 family signal peptidase -
K9U11_RS24475 (K9U11_24495) 53683..54948 + 1266 WP_000621288.1 TrbC family F-type conjugative pilus assembly protein -
K9U11_RS24480 (K9U11_24500) 54945..55616 + 672 WP_001337754.1 EAL domain-containing protein -
K9U11_RS24485 (K9U11_24505) 55616..56620 + 1005 WP_043940352.1 TraU family protein -
K9U11_RS24490 (K9U11_24510) 56736..59534 + 2799 WP_001256487.1 conjugal transfer mating pair stabilization protein TraN -
K9U11_RS24495 (K9U11_24515) 59573..60433 - 861 WP_000709517.1 hypothetical protein -
K9U11_RS24500 (K9U11_24520) 60556..61197 - 642 WP_228596151.1 hypothetical protein -
K9U11_RS24505 (K9U11_24525) 61491..61811 + 321 WP_000547566.1 hypothetical protein -
K9U11_RS24510 (K9U11_24530) 62115..62300 + 186 WP_001186917.1 hypothetical protein -
K9U11_RS24515 (K9U11_24535) 62520..63488 + 969 WP_228596153.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
K9U11_RS24520 (K9U11_24540) 63499..64407 + 909 WP_000739139.1 hypothetical protein -
K9U11_RS24525 (K9U11_24545) 64468..64998 + 531 WP_000987165.1 single-stranded DNA-binding protein -
K9U11_RS24530 (K9U11_24550) 65093..66082 + 990 WP_001282585.1 phage recombination protein Bet -
K9U11_RS24535 (K9U11_24555) 66145..67155 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
K9U11_RS24540 (K9U11_24560) 67355..68632 + 1278 WP_000170086.1 DUF3150 domain-containing protein -
K9U11_RS24545 (K9U11_24565) 68717..70513 + 1797 WP_021598075.1 VWA domain-containing protein -
K9U11_RS24550 (K9U11_24570) 70575..70910 + 336 WP_001071288.1 hypothetical protein -
K9U11_RS24555 (K9U11_24575) 71178..72384 - 1207 Protein_80 IS256 family transposase IS1414 Transposase
K9U11_RS24560 (K9U11_24580) 72496..73035 + 540 WP_000018872.1 hypothetical protein -
K9U11_RS24565 (K9U11_24585) 73126..73626 + 501 WP_000793769.1 hypothetical protein -
K9U11_RS24570 (K9U11_24590) 73700..74584 + 885 WP_228596076.1 DNA adenine modification methylase -
K9U11_RS24575 (K9U11_24595) 74650..74874 + 225 WP_001102700.1 class I ribonucleotide reductase maintenance protein YfaE -
K9U11_RS24580 (K9U11_24600) 74936..75325 + 390 WP_000026577.1 hypothetical protein -
K9U11_RS24585 (K9U11_24605) 75489..75767 + 279 WP_015059622.1 hypothetical protein -
K9U11_RS24590 (K9U11_24610) 75845..76087 - 243 WP_002210529.1 hypothetical protein -
K9U11_RS24595 (K9U11_24615) 76105..76296 + 192 WP_000651508.1 hypothetical protein -
K9U11_RS24600 (K9U11_24620) 76365..76718 + 354 WP_000994741.1 hypothetical protein -
K9U11_RS24605 (K9U11_24625) 76910..77254 + 345 WP_000209093.1 hypothetical protein -
K9U11_RS24610 (K9U11_24630) 77332..77634 + 303 WP_000410925.1 hypothetical protein -
K9U11_RS24615 (K9U11_24635) 77712..79337 + 1626 WP_228596078.1 DNA cytosine methyltransferase -
K9U11_RS24620 (K9U11_24640) 79398..79829 + 432 WP_000687894.1 hypothetical protein -
K9U11_RS24625 (K9U11_24645) 79903..80457 + 555 WP_001093868.1 hypothetical protein -
K9U11_RS24630 (K9U11_24650) 80690..81076 + 387 WP_000042274.1 hypothetical protein -
K9U11_RS24635 (K9U11_24655) 81164..83617 + 2454 WP_228596080.1 phosphoadenosine phosphosulfate reductase -
K9U11_RS24640 (K9U11_24660) 83819..84022 + 204 WP_228596081.1 hypothetical protein -
K9U11_RS24645 (K9U11_24665) 84094..84699 + 606 WP_228596083.1 5'-deoxynucleotidase -
K9U11_RS24650 (K9U11_24670) 84692..84961 + 270 WP_000184110.1 hypothetical protein -
K9U11_RS24655 (K9U11_24675) 84975..85193 + 219 WP_000260293.1 hypothetical protein -
K9U11_RS24660 (K9U11_24680) 85267..85824 + 558 WP_000064431.1 pyruvate dehydrogenase -
K9U11_RS24665 (K9U11_24685) 85899..86750 + 852 WP_228596085.1 NgrC -
K9U11_RS24670 (K9U11_24690) 87208..87594 + 387 WP_001077335.1 hypothetical protein -
K9U11_RS24675 (K9U11_24695) 87772..89499 + 1728 WP_228596087.1 toprim domain-containing protein -
K9U11_RS24680 (K9U11_24700) 89486..89764 + 279 WP_228596089.1 hypothetical protein -
K9U11_RS24685 (K9U11_24705) 89837..90076 + 240 WP_000714162.1 permease -
K9U11_RS24690 (K9U11_24710) 90086..90202 + 117 WP_000338626.1 hypothetical protein -
K9U11_RS24695 (K9U11_24715) 90323..90697 + 375 WP_000868821.1 hypothetical protein -
K9U11_RS24700 (K9U11_24720) 90811..91536 + 726 WP_228596091.1 hypothetical protein -
K9U11_RS24705 (K9U11_24725) 91777..94581 + 2805 Protein_110 DUF6531 domain-containing protein -
K9U11_RS24715 (K9U11_24735) 95808..97163 + 1356 Protein_112 tRNA3(Ser)-specific nuclease WapA VF
K9U11_RS24720 (K9U11_24740) 97160..97432 + 273 WP_000787563.1 MafI family immunity protein -
K9U11_RS24725 (K9U11_24745) 97437..97679 + 243 WP_000750746.1 hypothetical protein -
K9U11_RS24730 (K9U11_24750) 97727..98026 + 300 WP_011872911.1 hypothetical protein -
K9U11_RS24735 (K9U11_24755) 98193..98645 + 453 WP_000791469.1 hypothetical protein -
K9U11_RS24740 (K9U11_24760) 98661..99263 - 603 WP_000278322.1 hypothetical protein -
K9U11_RS24745 (K9U11_24765) 99525..99806 + 282 WP_228596093.1 hypothetical protein -
K9U11_RS24750 (K9U11_24770) 100105..100641 + 537 WP_000949433.1 hypothetical protein -
K9U11_RS24755 (K9U11_24775) 100644..101654 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
K9U11_RS24760 (K9U11_24780) 101659..102528 + 870 WP_000997323.1 3'-5' exonuclease -
K9U11_RS24765 (K9U11_24785) 102525..103016 + 492 WP_000139717.1 hypothetical protein -
K9U11_RS24770 (K9U11_24790) 103343..104218 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
K9U11_RS24775 (K9U11_24795) 104371..105411 + 1041 WP_000101568.1 DNA-binding protein -
K9U11_RS24780 (K9U11_24800) 105698..107209 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
K9U11_RS24785 (K9U11_24805) 107320..108360 + 1041 WP_001326396.1 conjugal transfer protein TraF -
K9U11_RS24790 (K9U11_24810) 108362..109795 + 1434 WP_000256129.1 conjugal transfer protein TraH -
K9U11_RS24795 (K9U11_24815) 109808..113422 + 3615 WP_072647760.1 conjugal transfer protein TraG N-terminal domain-containing protein -
K9U11_RS24800 (K9U11_24820) 113460..113822 - 363 WP_000683483.1 hypothetical protein -
K9U11_RS24805 (K9U11_24825) 114538..114810 + 273 WP_228596095.1 helix-turn-helix domain-containing protein -
K9U11_RS24810 (K9U11_24830) 114810..115343 + 534 WP_032064504.1 transglycosylase SLT domain-containing protein -
K9U11_RS24815 (K9U11_24835) 115354..115962 + 609 WP_000891157.1 hypothetical protein -
K9U11_RS24820 (K9U11_24840) 115959..116510 + 552 WP_001020646.1 FlhC family transcriptional regulator -
K9U11_RS24825 (K9U11_24845) 116570..116989 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
K9U11_RS24830 (K9U11_24850) 116991..117284 - 294 WP_000919078.1 hypothetical protein -
K9U11_RS24835 (K9U11_24855) 117301..118284 - 984 WP_000077458.1 ParM/StbA family protein -
K9U11_RS24840 (K9U11_24860) 118783..119322 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -
K9U11_RS24845 (K9U11_24865) 119327..119614 + 288 WP_228596097.1 hypothetical protein -
K9U11_RS24850 (K9U11_24870) 119599..120699 + 1101 WP_228596099.1 plasmid replication protein -
K9U11_RS24855 (K9U11_24875) 121736..122170 - 435 WP_000883925.1 hypothetical protein -
K9U11_RS24860 (K9U11_24880) 122188..123303 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
K9U11_RS24865 (K9U11_24885) 123572..124180 + 609 WP_000849071.1 hypothetical protein -
K9U11_RS24870 (K9U11_24890) 124185..124706 + 522 WP_000393785.1 hypothetical protein -
K9U11_RS24875 (K9U11_24895) 124709..125230 + 522 WP_000805800.1 hypothetical protein -
K9U11_RS24880 (K9U11_24900) 125327..125800 + 474 WP_228596101.1 hypothetical protein -
K9U11_RS24885 (K9U11_24905) 125811..126104 + 294 WP_001370730.1 hypothetical protein -
K9U11_RS24890 (K9U11_24910) 126109..126963 + 855 WP_000539392.1 hypothetical protein -
K9U11_RS24895 (K9U11_24915) 126963..127922 + 960 WP_000829616.1 S49 family peptidase -
K9U11_RS24900 (K9U11_24920) 127938..128798 + 861 WP_228596103.1 DsbA family protein -
K9U11_RS24905 (K9U11_24925) 128832..129260 + 429 WP_000591074.1 hypothetical protein -
K9U11_RS24910 (K9U11_24930) 129317..129676 + 360 WP_000422768.1 hypothetical protein -
K9U11_RS24915 (K9U11_24935) 129676..130122 + 447 WP_228596105.1 Fe3+-siderophore ABC transporter permease -
K9U11_RS24920 (K9U11_24940) 130119..130637 + 519 WP_228596106.1 nitrite reductase -
K9U11_RS24925 (K9U11_24945) 130637..130867 + 231 WP_000972663.1 hypothetical protein -
K9U11_RS24930 (K9U11_24950) 130854..131711 + 858 WP_001167032.1 hypothetical protein -
K9U11_RS24935 (K9U11_24955) 131737..131925 + 189 WP_001270411.1 hypothetical protein -
K9U11_RS24940 (K9U11_24960) 131942..132469 + 528 WP_001236377.1 thermonuclease family protein -
K9U11_RS24945 (K9U11_24965) 132527..132799 + 273 WP_228596109.1 HU family DNA-binding protein -
K9U11_RS24950 (K9U11_24970) 132887..133180 + 294 WP_001239997.1 chromosome segregation protein ParM -
K9U11_RS24955 (K9U11_24975) 133207..133509 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
K9U11_RS24960 (K9U11_24980) 133514..133864 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
K9U11_RS24965 (K9U11_24985) 134027..134575 + 549 WP_001061574.1 transcriptional regulator -
K9U11_RS24970 (K9U11_24990) 134916..135110 + 195 WP_000343597.1 hypothetical protein -
K9U11_RS24975 (K9U11_24995) 135121..135492 + 372 WP_000516916.1 hypothetical protein -
K9U11_RS24980 (K9U11_25000) 135485..135955 + 471 WP_001281821.1 hypothetical protein -
K9U11_RS24985 (K9U11_25005) 135970..136305 - 336 WP_000683476.1 hypothetical protein -
K9U11_RS24990 (K9U11_25010) 136402..136890 + 489 WP_228596111.1 DUF1643 domain-containing protein -
K9U11_RS24995 (K9U11_25015) 136893..137390 + 498 WP_228596113.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance