MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107755 bp
Accession: NZ_CP083449 Location: 1..107755 Organism: Pantoea eucrina strain XL123 Replicon: plasmid unnamed1
Accession: NZ_CP083449 Location: 1..107755 Organism: Pantoea eucrina strain XL123 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LAC65_RS16125 (LAC65_16125) | 984..1403 | - | 420 | Protein_1 | GNAT family N-acetyltransferase | - |
| LAC65_RS16130 (LAC65_16130) | 1822..2163 | + | 342 | WP_040113401.1 | plasmid mobilization protein MobA | - |
| LAC65_RS16135 (LAC65_16135) | 2163..3167 | + | 1005 | WP_224144872.1 | Protein TraI | Relaxase |
| LAC65_RS16140 (LAC65_16140) | 3064..4125 | + | 1062 | WP_224144873.1 | hypothetical protein | - |
| LAC65_RS16150 (LAC65_16150) | 5091..6014 | - | 924 | WP_082032684.1 | EamA family transporter | - |
| LAC65_RS16155 (LAC65_16155) | 6014..6601 | - | 588 | WP_040113404.1 | TetR/AcrR family transcriptional regulator | - |
| LAC65_RS16160 (LAC65_16160) | 6779..7018 | - | 240 | WP_040113405.1 | biofilm development regulator YmgB/AriR family protein | - |
| LAC65_RS16165 (LAC65_16165) | 7451..7693 | + | 243 | WP_040113406.1 | regulatory protein YcgZ | - |
| LAC65_RS16170 (LAC65_16170) | 7801..8067 | + | 267 | WP_052246539.1 | hypothetical protein | - |
| LAC65_RS16175 (LAC65_16175) | 8207..8464 | + | 258 | WP_040113440.1 | biofilm/acid-resistance regulator YmgB/AriR | - |
| LAC65_RS16180 (LAC65_16180) | 8715..8981 | - | 267 | WP_040113407.1 | hypothetical protein | - |
| LAC65_RS16185 (LAC65_16185) | 9044..9289 | - | 246 | WP_040113408.1 | hypothetical protein | - |
| LAC65_RS16190 (LAC65_16190) | 9680..9916 | - | 237 | WP_040113409.1 | DUF2171 domain-containing protein | - |
| LAC65_RS16195 (LAC65_16195) | 10128..10928 | + | 801 | WP_040113410.1 | Glucose 1-dehydrogenase 1 | VF |
| LAC65_RS16200 (LAC65_16200) | 11041..12579 | + | 1539 | WP_040113411.1 | Methyl-accepting chemotaxis protein III | VF |
| LAC65_RS16205 (LAC65_16205) | 12894..13625 | + | 732 | WP_040113412.1 | complement resistance protein TraT | - |
| LAC65_RS16210 (LAC65_16210) | 14329..15666 | + | 1338 | WP_224144874.1 | fructoselysine/psicoselysine transporter FrlA | - |
| LAC65_RS16215 (LAC65_16215) | 15688..16710 | + | 1023 | WP_040113413.1 | fructoselysine 6-phosphate deglycase | - |
| LAC65_RS16220 (LAC65_16220) | 16838..17623 | + | 786 | Protein_20 | fructoselysine 6-kinase | - |
| LAC65_RS16225 (LAC65_16225) | 17725..18459 | + | 735 | WP_040113415.1 | GntR family transcriptional regulator | - |
| LAC65_RS16230 (LAC65_16230) | 18604..19287 | - | 684 | WP_040113441.1 | haloacid dehalogenase type II | - |
| LAC65_RS16235 (LAC65_16235) | 19371..20849 | - | 1479 | WP_040113416.1 | alpha-amylase | - |
| LAC65_RS16240 (LAC65_16240) | 21061..21630 | + | 570 | WP_040113417.1 | DsrE family protein | - |
| LAC65_RS16245 (LAC65_16245) | 21704..22132 | - | 429 | WP_040113418.1 | ASCH domain-containing protein | - |
| LAC65_RS16250 (LAC65_16250) | 22183..22677 | - | 495 | WP_040113419.1 | DinB family protein | - |
| LAC65_RS16255 (LAC65_16255) | 22780..24774 | - | 1995 | WP_040113420.1 | choline BCCT transporter BetT | - |
| LAC65_RS16260 (LAC65_16260) | 24865..26127 | - | 1263 | WP_040113421.1 | DUF2254 domain-containing protein | - |
| LAC65_RS16265 (LAC65_16265) | 26151..26595 | - | 445 | Protein_29 | LysE family transporter | - |
| LAC65_RS16270 (LAC65_16270) | 26596..27312 | - | 717 | WP_040113422.1 | DJ-1/PfpI family protein | - |
| LAC65_RS16275 (LAC65_16275) | 27408..28097 | + | 690 | WP_040113423.1 | aspartate/glutamate racemase family protein | - |
| LAC65_RS16280 (LAC65_16280) | 28080..28676 | - | 597 | WP_040113424.1 | hypothetical protein | VF |
| LAC65_RS16290 (LAC65_16290) | 28954..30909 | + | 1956 | Protein_33 | Aerotaxis receptor | VF |
| LAC65_RS16295 (LAC65_16295) | 31050..31940 | + | 891 | WP_052246541.1 | ABC transporter six-transmembrane domain-containing protein | - |
| LAC65_RS16300 (LAC65_16300) | 31941..32822 | - | 882 | WP_040113425.1 | LysR family transcriptional regulator | - |
| LAC65_RS16305 (LAC65_16305) | 32927..33709 | + | 783 | WP_040113426.1 | acetolactate decarboxylase | - |
| LAC65_RS16310 (LAC65_16310) | 33724..35403 | + | 1680 | WP_040113443.1 | acetolactate synthase AlsS | - |
| LAC65_RS16315 (LAC65_16315) | 35587..37074 | - | 1488 | WP_040113427.1 | PhoPQ-activated protein PqaA family protein | - |
| LAC65_RS16320 (LAC65_16320) | 37813..39597 | - | 1785 | WP_040113428.1 | sensor domain-containing phosphodiesterase | - |
| LAC65_RS16325 (LAC65_16325) | 39591..41687 | - | 2097 | WP_192415538.1 | putative signaling protein | VF |
| LAC65_RS16330 (LAC65_16330) | 42010..42393 | - | 384 | WP_040113356.1 | lysozyme inhibitor LprI family protein | - |
| LAC65_RS16335 (LAC65_16335) | 42443..43492 | - | 1050 | WP_040113357.1 | tyrosine-type recombinase/integrase | - |
| LAC65_RS16340 (LAC65_16340) | 43993..44089 | - | 97 | Protein_43 | hypothetical protein | - |
| LAC65_RS16345 (LAC65_16345) | 44114..44353 | + | 240 | WP_040113358.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LAC65_RS16350 (LAC65_16350) | 44353..44640 | + | 288 | WP_040113359.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LAC65_RS16365 (LAC65_16365) | 46793..47155 | + | 363 | WP_040113360.1 | hypothetical protein | - |
| LAC65_RS16370 (LAC65_16370) | 47166..49265 | + | 2100 | WP_040113361.1 | pyrroloquinoline quinone-dependent dehydrogenase | - |
| LAC65_RS16375 (LAC65_16375) | 49322..49756 | - | 435 | WP_192415531.1 | DUF4174 domain-containing protein | - |
| LAC65_RS16380 (LAC65_16380) | 49854..51407 | - | 1554 | WP_040113431.1 | sensor domain-containing diguanylate cyclase | - |
| LAC65_RS16385 (LAC65_16385) | 51574..52029 | - | 456 | WP_040113362.1 | hypothetical protein | - |
| LAC65_RS16390 (LAC65_16390) | 52060..52992 | - | 933 | WP_040113363.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| LAC65_RS16395 (LAC65_16395) | 52994..54079 | - | 1086 | WP_040113364.1 | cysteine protease StiP family protein | - |
| LAC65_RS16400 (LAC65_16400) | 54066..54857 | - | 792 | WP_040113365.1 | hypothetical protein | - |
| LAC65_RS16405 (LAC65_16405) | 54850..55980 | - | 1131 | WP_192415530.1 | phosphoribosyltransferase domain-containing protein | - |
| LAC65_RS16410 (LAC65_16410) | 55980..57077 | - | 1098 | WP_071882942.1 | ATP-grasp domain-containing protein | - |
| LAC65_RS16415 (LAC65_16415) | 57385..57963 | + | 579 | WP_094111573.1 | TerD family protein | - |
| LAC65_RS16420 (LAC65_16420) | 57963..59129 | + | 1167 | WP_040113368.1 | TerD family protein | - |
| LAC65_RS16425 (LAC65_16425) | 59142..59597 | + | 456 | WP_040113369.1 | tellurite resistance TerB family protein | - |
| LAC65_RS16430 (LAC65_16430) | 59626..60660 | + | 1035 | WP_040113370.1 | TerC/Alx family metal homeostasis membrane protein | - |
| LAC65_RS16435 (LAC65_16435) | 60729..61307 | + | 579 | WP_040113371.1 | TerD family protein | - |
| LAC65_RS16440 (LAC65_16440) | 61377..61952 | + | 576 | WP_040113372.1 | TerD family protein | - |
| LAC65_RS16445 (LAC65_16445) | 62027..63259 | + | 1233 | WP_040113373.1 | VWA domain-containing protein | - |
| LAC65_RS16450 (LAC65_16450) | 63425..64171 | + | 747 | WP_040113374.1 | MerR family transcriptional regulator | - |
| LAC65_RS16455 (LAC65_16455) | 64408..65334 | + | 927 | WP_040113375.1 | aminoimidazole riboside kinase | - |
| LAC65_RS16460 (LAC65_16460) | 65512..65763 | + | 252 | WP_040113376.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| LAC65_RS16465 (LAC65_16465) | 65760..66014 | + | 255 | WP_040113377.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LAC65_RS16470 (LAC65_16470) | 66346..67554 | + | 1209 | WP_192415528.1 | aldose 1-epimerase family protein | - |
| LAC65_RS16475 (LAC65_16475) | 67803..69323 | + | 1521 | WP_040113379.1 | carbohydrate porin | - |
| LAC65_RS16480 (LAC65_16480) | 69388..70758 | + | 1371 | WP_040113380.1 | sucrose-specific PTS transporter subunit IIBC | - |
| LAC65_RS16485 (LAC65_16485) | 70758..72167 | + | 1410 | WP_040113381.1 | sucrose-6-phosphate hydrolase | - |
| LAC65_RS16490 (LAC65_16490) | 72197..73204 | + | 1008 | WP_040113382.1 | LacI family DNA-binding transcriptional regulator | - |
| LAC65_RS16495 (LAC65_16495) | 73231..73386 | + | 156 | Protein_74 | antitoxin | - |
| LAC65_RS16500 (LAC65_16500) | 73383..73540 | + | 158 | Protein_75 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| LAC65_RS16505 (LAC65_16505) | 74228..75181 | - | 954 | WP_040113433.1 | Recombination-promoting nuclease RpnA | VF |
| LAC65_RS16510 (LAC65_16510) | 75376..75705 | - | 330 | WP_052246535.1 | hypothetical protein | VF |
| LAC65_RS16515 (LAC65_16515) | 75791..76732 | - | 942 | WP_040113383.1 | Recombination-promoting nuclease RpnA | VF |
| LAC65_RS16520 (LAC65_16520) | 76930..77256 | - | 327 | WP_144380355.1 | hypothetical protein | - |
| LAC65_RS16525 (LAC65_16525) | 77653..77823 | + | 171 | WP_071882943.1 | DUF2256 domain-containing protein | - |
| LAC65_RS16530 (LAC65_16530) | 77828..79279 | - | 1452 | WP_192415535.1 | sugar porter family MFS transporter | - |
| LAC65_RS16535 (LAC65_16535) | 79528..80427 | + | 900 | WP_040113384.1 | Hydrogen peroxide-inducible genes activator | VF |
| LAC65_RS16540 (LAC65_16540) | 80402..81199 | - | 798 | WP_040113385.1 | substrate-binding domain-containing protein | - |
| LAC65_RS16545 (LAC65_16545) | 81214..82509 | - | 1296 | WP_040113386.1 | MFS transporter | - |
| LAC65_RS16550 (LAC65_16550) | 82828..83520 | + | 693 | Protein_85 | IS1 family transposase | - |
| LAC65_RS16555 (LAC65_16555) | 84425..85453 | - | 1029 | WP_052246543.1 | RepB family plasmid replication initiator protein | - |
| LAC65_RS16560 (LAC65_16560) | 85945..87149 | + | 1205 | WP_144380260.1 | IS3 family transposase ISAs17 | Transposase |
| LAC65_RS16565 (LAC65_16565) | 88062..89036 | - | 975 | WP_040113389.1 | ParB/RepB/Spo0J family partition protein | - |
| LAC65_RS16570 (LAC65_16570) | 89033..90241 | - | 1209 | WP_192415537.1 | Plasmid partition protein A | VF |
| LAC65_RS16575 (LAC65_16575) | 91267..91491 | + | 225 | WP_235441142.1 | hypothetical protein | VF |
| LAC65_RS16580 (LAC65_16580) | 91717..91980 | + | 264 | WP_224144877.1 | helix-turn-helix transcriptional regulator | - |
| LAC65_RS16585 (LAC65_16585) | 92346..93505 | - | 1160 | Protein_92 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LAC65_RS16590 (LAC65_16590) | 93740..93949 | + | 210 | WP_040113390.1 | hypothetical protein | - |
| LAC65_RS16595 (LAC65_16595) | 94144..94512 | + | 369 | WP_040113391.1 | helix-turn-helix transcriptional regulator | - |
| LAC65_RS16600 (LAC65_16600) | 95238..95546 | - | 309 | WP_052246537.1 | Bifunctional protein GlmU | VF |
| LAC65_RS16605 (LAC65_16605) | 95755..96539 | - | 785 | Protein_96 | DUF4113 domain-containing protein | - |
| LAC65_RS16610 (LAC65_16610) | 96754..97548 | - | 795 | WP_040113392.1 | HTH-type transcriptional regulator NimR | VF |
| LAC65_RS16615 (LAC65_16615) | 97636..98826 | + | 1191 | WP_040113437.1 | MFS transporter | - |
| LAC65_RS16620 (LAC65_16620) | 98921..99838 | - | 918 | WP_010259086.1 | HTH-type transcriptional regulator PgrR | VF |
| LAC65_RS16625 (LAC65_16625) | 99969..101366 | + | 1398 | WP_040113393.1 | amidohydrolase family protein | - |
| LAC65_RS16630 (LAC65_16630) | 101381..101848 | + | 468 | WP_040113394.1 | DMT family transporter | - |
| LAC65_RS16635 (LAC65_16635) | 101906..102766 | + | 861 | WP_040113395.1 | SMP-30/gluconolactonase/LRE family protein | - |
| LAC65_RS16640 (LAC65_16640) | 102993..103460 | + | 468 | WP_040113396.1 | GNAT family N-acetyltransferase | - |
| LAC65_RS16645 (LAC65_16645) | 103967..104389 | + | 423 | WP_040113438.1 | GNAT family N-acetyltransferase | - |
| LAC65_RS16650 (LAC65_16650) | 104508..104819 | - | 312 | WP_052246538.1 | hypothetical protein | - |
| LAC65_RS16655 (LAC65_16655) | 104849..105982 | + | 1134 | WP_040113397.1 | glutathione-independent formaldehyde dehydrogenase | - |
| LAC65_RS16660 (LAC65_16660) | 106339..107475 | - | 1137 | WP_040113398.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|