MGE detailed information
MGE type: Prophage MGE length: 46781 bp
Accession: NZ_CP082916 Location: 237651..284431 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: chromosome
Accession: NZ_CP082916 Location: 237651..284431 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8862_RS01230 () | 233164..233661 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K8862_RS01235 () | 233790..235073 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K8862_RS01240 () | 235042..237675 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| K8862_RS01245 () | 237753..239192 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K8862_RS01250 () | 239310..239546 | + | 237 | WP_024131108.1 | YebV family protein | - |
| K8862_RS01255 () | 239657..239848 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| K8862_RS01260 () | 239867..240517 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| K8862_RS01265 () | 240741..240905 | - | 165 | WP_001134856.1 | membrane protein | - |
| K8862_RS01270 () | 241190..241912 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| K8862_RS01275 () | 242596..242991 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K8862_RS01280 () | 243321..243797 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| K8862_RS01285 () | 244170..244589 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| K8862_RS01290 () | 244962..245231 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| K8862_RS01295 () | 245397..245537 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| K8862_RS01300 () | 245683..246890 | - | 1208 | Protein_252 | IS256 family transposase | - |
| K8862_RS01305 () | 246960..247426 | + | 467 | Protein_253 | tyrosine-type recombinase/integrase | - |
| K8862_RS01310 () | 248676..249590 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| K8862_RS01315 () | 249723..249881 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K8862_RS01320 () | 249891..250505 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| K8862_RS01325 () | 250832..251064 | - | 233 | Protein_257 | helix-turn-helix domain-containing protein | - |
| K8862_RS01330 () | 251673..251774 | - | 102 | Protein_258 | arsenic transporter | - |
| K8862_RS01335 () | 251765..251945 | + | 181 | Protein_259 | IS3 family transposase | - |
| K8862_RS01340 () | 252335..252535 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| K8862_RS01345 () | 252632..253143 | - | 512 | Protein_261 | tail fiber assembly protein | - |
| K8862_RS23145 () | 253156..253443 | - | 288 | Protein_262 | macro domain-containing protein | - |
| K8862_RS01350 () | 253453..254684 | - | 1232 | Protein_263 | tail fiber protein | - |
| K8862_RS01355 () | 254683..255250 | - | 568 | Protein_264 | phage terminase large subunit family protein | - |
| K8862_RS01360 () | 255237..255728 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| K8862_RS01365 () | 255783..255971 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| K8862_RS01370 () | 256036..256203 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| K8862_RS01375 () | 256460..256993 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| K8862_RS01380 () | 257047..257238 | - | 192 | Protein_269 | glycoside hydrolase family 19 protein | - |
| K8862_RS01385 () | 257227..257688 | + | 462 | Protein_270 | DNA breaking-rejoining protein | - |
| K8862_RS01390 () | 257952..258874 | + | 923 | Protein_271 | tyrosine-type recombinase/integrase | - |
| K8862_RS01395 () | 259819..260619 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| K8862_RS01400 () | 260648..260889 | - | 242 | Protein_273 | recombinase family protein | - |
| K8862_RS01405 () | 261099..261821 | + | 723 | WP_000161704.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE | - |
| K8862_RS01410 () | 262023..262367 | - | 345 | Protein_275 | tail fiber assembly protein | - |
| K8862_RS01415 () | 262372..263235 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| K8862_RS01420 () | 263275..265606 | - | 2332 | Protein_277 | host specificity protein J | - |
| K8862_RS01425 () | 265606..265866 | - | 261 | Protein_278 | C40 family peptidase | - |
| K8862_RS01430 () | 265876..266571 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| K8862_RS01435 () | 266661..267194 | + | 534 | WP_000877926.1 | superoxide dismutase [Cu-Zn] SodC1 | - |
| K8862_RS01440 () | 267311..267490 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| K8862_RS01445 () | 267570..267881 | - | 312 | Protein_282 | DUF1441 family protein | - |
| K8862_RS23150 () | 268089..268568 | - | 480 | WP_001541990.1 | lysis protein | - |
| K8862_RS01460 () | 268586..269038 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| K8862_RS01465 () | 269022..269351 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| K8862_RS01470 () | 269627..270313 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| K8862_RS01475 () | 270674..271123 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| K8862_RS01480 () | 271497..272024 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| K8862_RS01485 () | 272118..272807 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| K8862_RS01490 () | 272804..272940 | - | 137 | Protein_290 | YlcG family protein | - |
| K8862_RS01495 () | 272937..273077 | - | 141 | Protein_291 | recombination protein NinG | - |
| K8862_RS01500 () | 273161..273760 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| K8862_RS01505 () | 273824..274042 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| K8862_RS01510 () | 274344..274442 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| K8862_RS01515 () | 274761..276740 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| K8862_RS01520 () | 277154..277432 | + | 279 | WP_001575998.1 | excisionase | - |
| K8862_RS01525 () | 277407..278486 | + | 1080 | WP_000087636.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 278624..278769 | + | 146 | - | - | Antitoxin Detail |
| - | 278626..278729 | - | 104 | - | - | Toxin Detail |
| K8862_RS01530 () | 278869..279222 | - | 354 | WP_000722370.1 | YebY family protein | - |
| K8862_RS01535 () | 279239..280114 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| K8862_RS01540 () | 280115..280489 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K8862_RS01545 () | 280627..280857 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K8862_RS01550 () | 280965..281621 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| K8862_RS01555 () | 281645..282343 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| K8862_RS01560 () | 282380..284431 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| K8862_RS01565 () | 284644..285303 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| K8862_RS01570 () | 285397..285750 | - | 354 | WP_001042123.1 | protein YebF | - |
| K8862_RS01575 () | 285818..286108 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K8862_RS01580 () | 286239..287417 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K8862_RS01585 () | 287517..288158 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|